RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 RPS6KA2Q15349 733 aa6.87□□□□□ -1.31
SF3A3-206ENST00000487062 C18orf21Q32NC0 220 aaPredicted RBP6.87□□□□□ -1.31
SF3A3-206ENST00000487062 ZNF658BQ4V348 819 aaPredicted RBP6.87□□□□□ -1.31
SF3A3-206ENST00000487062 LETMD1Q6P1Q0 360 aa6.87□□□□□ -1.31
SF3A3-206ENST00000487062 MBOAT1Q6ZNC8 495 aa6.87□□□□□ -1.31
SF3A3-206ENST00000487062 RNF165Q6ZSG1 346 aa6.87□□□□□ -1.31
SF3A3-206ENST00000487062 CHSY3Q70JA7 882 aa6.87□□□□□ -1.31
SF3A3-206ENST00000487062 LARP4Q71RC2 724 aaKnown RBP eCLIP6.87□□□□□ -1.31
SF3A3-206ENST00000487062 SPATA19Q7Z5L4 167 aa6.87□□□□□ -1.31
SF3A3-206ENST00000487062 FAM124AQ86V42 546 aa6.87□□□□□ -1.31
SF3A3-206ENST00000487062 TRIM69Q86WT6 500 aa6.87□□□□□ -1.31
SF3A3-206ENST00000487062 OXR1Q8N573 874 aa6.87□□□□□ -1.31
SF3A3-206ENST00000487062 CDYL2Q8N8U2 506 aa6.87□□□□□ -1.31
SF3A3-206ENST00000487062 SNX31Q8N9S9 440 aa6.87□□□□□ -1.31
SF3A3-206ENST00000487062 OR4F6Q8NGB9 312 aa6.87□□□□□ -1.31
SF3A3-206ENST00000487062 OR52B6Q8NGF0 335 aa6.87□□□□□ -1.31
SF3A3-206ENST00000487062 RP9Q8TA86 221 aaKnown RBP6.87□□□□□ -1.31
SF3A3-206ENST00000487062 MCUR1Q96AQ8 359 aa6.87□□□□□ -1.31
SF3A3-206ENST00000487062 TUBGCP3Q96CW5 907 aa6.87□□□□□ -1.31
SF3A3-206ENST00000487062 KCNA7Q96RP8 456 aa6.87□□□□□ -1.31
SF3A3-206ENST00000487062 NELL2Q99435 816 aa6.87□□□□□ -1.31
SF3A3-206ENST00000487062 ARHGAP9Q9BRR9 750 aa6.87□□□□□ -1.31
SF3A3-206ENST00000487062 APOOQ9BUR5 198 aa6.87□□□□□ -1.31
SF3A3-206ENST00000487062 C1orf21Q9H246 121 aa6.87□□□□□ -1.31
SF3A3-206ENST00000487062 MMADHCQ9H3L0 296 aaPredicted RBP6.87□□□□□ -1.31
SF3A3-206ENST00000487062 AKTIPQ9H8T0 292 aa6.87□□□□□ -1.31
SF3A3-206ENST00000487062 ACTR8Q9H981 624 aa6.87□□□□□ -1.31
SF3A3-206ENST00000487062 ITM2CQ9NQX7 267 aa6.87□□□□□ -1.31
SF3A3-206ENST00000487062 MBNL1Q9NR56 388 aaKnown RBP6.87□□□□□ -1.31
SF3A3-206ENST00000487062 KLC4Q9NSK0 619 aa6.87□□□□□ -1.31
SF3A3-206ENST00000487062 ZNHIT2Q9UHR6 403 aa6.87□□□□□ -1.31
SF3A3-206ENST00000487062 ACSL5Q9ULC5 683 aa6.87□□□□□ -1.31
SF3A3-206ENST00000487062 G3BP2Q9UN86 482 aaKnown RBP6.87□□□□□ -1.31
SF3A3-206ENST00000487062 BTRCQ9Y297 605 aa6.87□□□□□ -1.31
SF3A3-206ENST00000487062 ASB1Q9Y576 335 aa6.87□□□□□ -1.31
SF3A3-206ENST00000487062 TIMM22Q9Y584 194 aa6.87□□□□□ -1.31
SF3A3-206ENST00000487062 ATP6AP2A0A1C7CYW4 349 aa6.86□□□□□ -1.31
SF3A3-206ENST00000487062 SHISA7A6NL88 538 aa6.86□□□□□ -1.31
SF3A3-206ENST00000487062 ZNF839A8K0R7 811 aa6.86□□□□□ -1.31
SF3A3-206ENST00000487062 SLC28A1O00337 649 aa6.86□□□□□ -1.31
SF3A3-206ENST00000487062 TOR1BO14657 336 aa6.86□□□□□ -1.31
SF3A3-206ENST00000487062 SLC31A1O15431 190 aa6.86□□□□□ -1.31
SF3A3-206ENST00000487062 RGS14O43566 566 aa6.86□□□□□ -1.31
SF3A3-206ENST00000487062 UGDHO60701 494 aa6.86□□□□□ -1.31
SF3A3-206ENST00000487062 ULK1O75385 1050 aa6.86□□□□□ -1.31
SF3A3-206ENST00000487062 ATP6AP2O75787 350 aa6.86□□□□□ -1.31
SF3A3-206ENST00000487062 C1orf105O95561 183 aa6.86□□□□□ -1.31
SF3A3-206ENST00000487062 LINC00032P0C843 101 aa6.86□□□□□ -1.31
SF3A3-206ENST00000487062 CHRNB1P11230 501 aa6.86□□□□□ -1.31
SF3A3-206ENST00000487062 IL9P15248 144 aa6.86□□□□□ -1.31
SF3A3-206ENST00000487062 CD72P21854 359 aa6.86□□□□□ -1.31
SF3A3-206ENST00000487062 HNRNPA2B1P22626 353 aaKnown RBP6.86□□□□□ -1.31
SF3A3-206ENST00000487062 PDHA2P29803 388 aa6.86□□□□□ -1.31
SF3A3-206ENST00000487062 PRDX3P30048 256 aaKnown RBP6.86□□□□□ -1.31
SF3A3-206ENST00000487062 OXTRP30559 389 aa6.86□□□□□ -1.31
SF3A3-206ENST00000487062 AKT2P31751 481 aa6.86□□□□□ -1.31
SF3A3-206ENST00000487062 NUDT1P36639 197 aa6.86□□□□□ -1.31
SF3A3-206ENST00000487062 GDF5P43026 501 aa6.86□□□□□ -1.31
SF3A3-206ENST00000487062 BDKRB1P46663 353 aa6.86□□□□□ -1.31
SF3A3-206ENST00000487062 CPA2P48052 419 aa6.86□□□□□ -1.31
SF3A3-206ENST00000487062 FOXA1P55317 472 aa6.86□□□□□ -1.31
SF3A3-206ENST00000487062 KIAA1024LP59773 190 aa6.86□□□□□ -1.31
SF3A3-206ENST00000487062 ERVPABLB-1P60509 514 aa6.86□□□□□ -1.31
SF3A3-206ENST00000487062 PPP2CBP62714 309 aa6.86□□□□□ -1.31
SF3A3-206ENST00000487062 KCNJ2P63252 427 aa6.86□□□□□ -1.31
SF3A3-206ENST00000487062 PPP2CAP67775 309 aa6.86□□□□□ -1.31
SF3A3-206ENST00000487062 ZNF33BQ06732 778 aa6.86□□□□□ -1.31
SF3A3-206ENST00000487062 DMPKQ09013 629 aa6.86□□□□□ -1.31
SF3A3-206ENST00000487062 GRIK2Q13002 908 aa6.86□□□□□ -1.31
SF3A3-206ENST00000487062 STX5Q13190 355 aa6.86□□□□□ -1.31
SF3A3-206ENST00000487062 MAD2L1Q13257 205 aaPredicted RBP6.86□□□□□ -1.31
SF3A3-206ENST00000487062 CYLC2Q14093 348 aaPredicted RBP6.86□□□□□ -1.31
SF3A3-206ENST00000487062 FASTKQ14296 549 aaKnown RBP6.86□□□□□ -1.31
SF3A3-206ENST00000487062 NFE2L1Q14494 772 aa6.86□□□□□ -1.31
SF3A3-206ENST00000487062 GSTA3Q16772 222 aa6.86□□□□□ -1.31
SF3A3-206ENST00000487062 IMPG1Q17R60 797 aa6.86□□□□□ -1.31
SF3A3-206ENST00000487062 KIF19Q2TAC6 998 aa6.86□□□□□ -1.31
SF3A3-206ENST00000487062 SMU1Q2TAY7 513 aa6.86□□□□□ -1.31
SF3A3-206ENST00000487062 PTCHD3Q3KNS1 767 aa6.86□□□□□ -1.31
SF3A3-206ENST00000487062 PLA2G4EQ3MJ16 856 aa6.86□□□□□ -1.31
SF3A3-206ENST00000487062 GGTA1PQ4G0N0 100 aa6.86□□□□□ -1.31
SF3A3-206ENST00000487062 OXLD1Q5BKU9 147 aa6.86□□□□□ -1.31
SF3A3-206ENST00000487062 LIPJQ5W064 366 aa6.86□□□□□ -1.31
SF3A3-206ENST00000487062 TMEM198Q66K66 360 aa6.86□□□□□ -1.31
SF3A3-206ENST00000487062 OGFOD2Q6N063 350 aa6.86□□□□□ -1.31
SF3A3-206ENST00000487062 AGTRAPQ6RW13 159 aa6.86□□□□□ -1.31
SF3A3-206ENST00000487062 IL27RAQ6UWB1 636 aa6.86□□□□□ -1.31
SF3A3-206ENST00000487062 RINLQ6ZS11 566 aa6.86□□□□□ -1.31
SF3A3-206ENST00000487062 Q7L0L9 218 aa6.86□□□□□ -1.31
SF3A3-206ENST00000487062 SYT13Q7L8C5 426 aa6.86□□□□□ -1.31
SF3A3-206ENST00000487062 C11orf96Q7Z7L8 435 aa6.86□□□□□ -1.31
SF3A3-206ENST00000487062 PDZD3Q86UT5 571 aa6.86□□□□□ -1.31
SF3A3-206ENST00000487062 LONP2Q86WA8 852 aa6.86□□□□□ -1.31
SF3A3-206ENST00000487062 MYLK4Q86YV6 388 aaPredicted RBP6.86□□□□□ -1.31
SF3A3-206ENST00000487062 GALNT13Q8IUC8 556 aa6.86□□□□□ -1.31
SF3A3-206ENST00000487062 ZNF547Q8IVP9 402 aa6.86□□□□□ -1.31
SF3A3-206ENST00000487062 KLHDC8AQ8IYD2 350 aa6.86□□□□□ -1.31
SF3A3-206ENST00000487062 C10orf67Q8IYJ2 551 aa6.86□□□□□ -1.31
SF3A3-206ENST00000487062 KIF2BQ8N4N8 673 aa6.86□□□□□ -1.31
SF3A3-206ENST00000487062 RAB42Q8N4Z0 105 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms