RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 XRCC1P18887 633 aaPredicted RBP12.43□□□□□ -0.42
HDAC6-229ENST00000486665 CCT5P48643 541 aa12.43□□□□□ -0.42
HDAC6-229ENST00000486665 GRB7Q14451 532 aa12.43□□□□□ -0.42
HDAC6-229ENST00000486665 PPP1R3AQ16821 1122 aa12.43□□□□□ -0.42
HDAC6-229ENST00000486665 TECRLQ5HYJ1 363 aa12.43□□□□□ -0.42
HDAC6-229ENST00000486665 C6orf132Q5T0Z8 1188 aa12.43□□□□□ -0.42
HDAC6-229ENST00000486665 DBX2Q6ZNG2 339 aa12.43□□□□□ -0.42
HDAC6-229ENST00000486665 KYQ8NBH2 561 aa12.43□□□□□ -0.42
HDAC6-229ENST00000486665 GPR156Q8NFN8 814 aa12.43□□□□□ -0.42
HDAC6-229ENST00000486665 SETD7Q8WTS6 366 aaKnown RBP12.43□□□□□ -0.42
HDAC6-229ENST00000486665 ALKBH8Q96BT7 664 aaKnown RBP12.43□□□□□ -0.42
HDAC6-229ENST00000486665 APOPT1Q96IL0 206 aa12.43□□□□□ -0.42
HDAC6-229ENST00000486665 SCYL1Q96KG9 808 aa12.43□□□□□ -0.42
HDAC6-229ENST00000486665 FOPNLQ96NB1 174 aa12.43□□□□□ -0.42
HDAC6-229ENST00000486665 ATOH8Q96SQ7 321 aa12.43□□□□□ -0.42
HDAC6-229ENST00000486665 TRIT1Q9H3H1 467 aaKnown RBP12.43□□□□□ -0.42
HDAC6-229ENST00000486665 PARVBQ9HBI1 364 aa12.43□□□□□ -0.42
HDAC6-229ENST00000486665 KCNK9Q9NPC2 374 aa12.43□□□□□ -0.42
HDAC6-229ENST00000486665 MKS1Q9NXB0 559 aa12.43□□□□□ -0.42
HDAC6-229ENST00000486665 NLGN3Q9NZ94 848 aa12.43□□□□□ -0.42
HDAC6-229ENST00000486665 SLC17A7Q9P2U7 560 aa12.43□□□□□ -0.42
HDAC6-229ENST00000486665 CPNE7Q9UBL6 633 aa12.43□□□□□ -0.42
HDAC6-229ENST00000486665 PLLPQ9Y342 182 aa12.43□□□□□ -0.42
HDAC6-229ENST00000486665 KIR2DS5A0A0G2JLQ3 304 aa12.42□□□□□ -0.42
HDAC6-229ENST00000486665 A0A0G2JNG1 304 aa12.42□□□□□ -0.42
HDAC6-229ENST00000486665 TARM1B6A8C7 271 aa12.42□□□□□ -0.42
HDAC6-229ENST00000486665 H3BQF6 201 aa12.42□□□□□ -0.42
HDAC6-229ENST00000486665 KIR2DS3K7RE56 304 aa12.42□□□□□ -0.42
HDAC6-229ENST00000486665 PPM1DO15297 605 aa12.42□□□□□ -0.42
HDAC6-229ENST00000486665 SIGLEC6O43699 453 aa12.42□□□□□ -0.42
HDAC6-229ENST00000486665 CATP04040 527 aaKnown RBP12.42□□□□□ -0.42
HDAC6-229ENST00000486665 PROCP04070 461 aa12.42□□□□□ -0.42
HDAC6-229ENST00000486665 RPA3P35244 121 aaPredicted RBP12.42□□□□□ -0.42
HDAC6-229ENST00000486665 KRT33BQ14525 404 aa12.42□□□□□ -0.42
HDAC6-229ENST00000486665 KIR2DS5Q14953 304 aa12.42□□□□□ -0.42
HDAC6-229ENST00000486665 TSNAXIP1Q2TAA8 658 aa12.42□□□□□ -0.42
HDAC6-229ENST00000486665 COL28A1Q2UY09 1125 aa12.42□□□□□ -0.42
HDAC6-229ENST00000486665 KLC3Q6P597 504 aa12.42□□□□□ -0.42
HDAC6-229ENST00000486665 MBOAT1Q6ZNC8 495 aa12.42□□□□□ -0.42
HDAC6-229ENST00000486665 GLRX5Q86SX6 157 aa12.42□□□□□ -0.42
HDAC6-229ENST00000486665 LCA5Q86VQ0 697 aa12.42□□□□□ -0.42
HDAC6-229ENST00000486665 GPSM1Q86YR5 675 aa12.42□□□□□ -0.42
HDAC6-229ENST00000486665 SLC35F3Q8IY50 421 aa12.42□□□□□ -0.42
HDAC6-229ENST00000486665 TBC1D21Q8IYX1 336 aa12.42□□□□□ -0.42
HDAC6-229ENST00000486665 LMNTD1Q8N9Z9 388 aa12.42□□□□□ -0.42
HDAC6-229ENST00000486665 OR4C6Q8NH72 309 aa12.42□□□□□ -0.42
HDAC6-229ENST00000486665 OR5K2Q8NHB8 316 aa12.42□□□□□ -0.42
HDAC6-229ENST00000486665 STAG3L4Q8TBR4 150 aa12.42□□□□□ -0.42
HDAC6-229ENST00000486665 MAPK15Q8TD08 544 aa12.42□□□□□ -0.42
HDAC6-229ENST00000486665 TCP10LQ8TDR4 215 aa12.42□□□□□ -0.42
HDAC6-229ENST00000486665 JPH3Q8WXH2 748 aaPredicted RBP12.42□□□□□ -0.42
HDAC6-229ENST00000486665 CXorf40BQ96DE9 158 aa12.42□□□□□ -0.42
HDAC6-229ENST00000486665 TSNARE1Q96NA8 513 aa12.42□□□□□ -0.42
HDAC6-229ENST00000486665 PKP4Q99569 1192 aa12.42□□□□□ -0.42
HDAC6-229ENST00000486665 HGH1Q9BTY7 390 aa12.42□□□□□ -0.42
HDAC6-229ENST00000486665 MVB12BQ9H7P6 319 aa12.42□□□□□ -0.42
HDAC6-229ENST00000486665 SLC40A1Q9NP59 571 aa12.42□□□□□ -0.42
HDAC6-229ENST00000486665 SSU72Q9NP77 194 aaKnown RBP12.42□□□□□ -0.42
HDAC6-229ENST00000486665 UTP6Q9NYH9 597 aaKnown RBP12.42□□□□□ -0.42
HDAC6-229ENST00000486665 CPSF2Q9P2I0 782 aaKnown RBP12.42□□□□□ -0.42
HDAC6-229ENST00000486665 XPR1Q9UBH6 696 aa12.42□□□□□ -0.42
HDAC6-229ENST00000486665 GRID1Q9ULK0 1009 aa12.42□□□□□ -0.42
HDAC6-229ENST00000486665 RNF112Q9ULX5 631 aa12.42□□□□□ -0.42
HDAC6-229ENST00000486665 PLAGL1Q9UM63 463 aa12.42□□□□□ -0.42
HDAC6-229ENST00000486665 TDRKHQ9Y2W6 561 aaKnown RBP12.42□□□□□ -0.42
HDAC6-229ENST00000486665 OARD1Q9Y530 152 aa12.42□□□□□ -0.42
HDAC6-229ENST00000486665 PCDHGB2Q9Y5G2 931 aa12.42□□□□□ -0.42
HDAC6-229ENST00000486665 HEBP2Q9Y5Z4 205 aa12.42□□□□□ -0.42
HDAC6-229ENST00000486665 COLEC10Q9Y6Z7 277 aa12.42□□□□□ -0.42
HDAC6-229ENST00000486665 GOLGA4Q13439 2230 aaKnown RBP12.42□□□□□ -0.42
HDAC6-229ENST00000486665 LY6G6EA0A0G2JKS1 128 aa12.41□□□□□ -0.42
HDAC6-229ENST00000486665 HMGB1P1B2RPK0 211 aaPredicted RBP12.41□□□□□ -0.42
HDAC6-229ENST00000486665 UBXN8O00124 270 aa12.41□□□□□ -0.42
HDAC6-229ENST00000486665 TK2O00142 265 aa12.41□□□□□ -0.42
HDAC6-229ENST00000486665 PRPF4O43172 522 aaKnown RBP eCLIP12.41□□□□□ -0.425e-6■■■□□ 18.8
HDAC6-229ENST00000486665 PLIN3O60664 434 aa12.41□□□□□ -0.42
HDAC6-229ENST00000486665 KERAO60938 352 aa12.41□□□□□ -0.42
HDAC6-229ENST00000486665 VIPP01282 170 aa12.41□□□□□ -0.42
HDAC6-229ENST00000486665 RBP1P09455 135 aa12.41□□□□□ -0.42
HDAC6-229ENST00000486665 ALPPL2P10696 532 aa12.41□□□□□ -0.42
HDAC6-229ENST00000486665 MTHFD2P13995 350 aa12.41□□□□□ -0.42
HDAC6-229ENST00000486665 SLC2A4P14672 509 aa12.41□□□□□ -0.42
HDAC6-229ENST00000486665 CYP2A7P20853 494 aa12.41□□□□□ -0.42
HDAC6-229ENST00000486665 RPIAP49247 311 aa12.41□□□□□ -0.42
HDAC6-229ENST00000486665 SP140Q13342 867 aa12.41□□□□□ -0.42
HDAC6-229ENST00000486665 SUZ12Q15022 739 aaKnown RBP12.41□□□□□ -0.42
HDAC6-229ENST00000486665 C14orf28Q4W4Y0 310 aa12.41□□□□□ -0.42
HDAC6-229ENST00000486665 SOWAHCQ53LP3 525 aaPredicted RBP12.41□□□□□ -0.42
HDAC6-229ENST00000486665 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.41□□□□□ -0.42
HDAC6-229ENST00000486665 ADAMTSL2Q86TH1 951 aa12.41□□□□□ -0.42
HDAC6-229ENST00000486665 SLC9B2Q86UD5 537 aa12.41□□□□□ -0.42
HDAC6-229ENST00000486665 TRIM48Q8IWZ4 208 aa12.41□□□□□ -0.42
HDAC6-229ENST00000486665 ARL10Q8N8L6 244 aa12.41□□□□□ -0.42
HDAC6-229ENST00000486665 FBXO15Q8NCQ5 510 aaPredicted RBP12.41□□□□□ -0.42
HDAC6-229ENST00000486665 OR9A1PQ8NGU1 263 aa12.41□□□□□ -0.42
HDAC6-229ENST00000486665 RHEBL1Q8TAI7 183 aa12.41□□□□□ -0.42
HDAC6-229ENST00000486665 MCOLN3Q8TDD5 553 aa12.41□□□□□ -0.42
HDAC6-229ENST00000486665 DENND1AQ8TEH3 1009 aa12.41□□□□□ -0.42
HDAC6-229ENST00000486665 EXT2Q93063 718 aa12.41□□□□□ -0.42
HDAC6-229ENST00000486665 APOLD1Q96LR9 279 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms