RNA–Protein interactions for RNA: ENST00000486039.1

SNX5-213, Transcript of sorting nexin 5, humanhuman

TSL 1 (best) BASIC

Gene SNX5, Length 602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-213ENST00000486039 MAD1L1Q9Y6D9 718 aa18.9■□□□□ 0.62
SNX5-213ENST00000486039 PFDN6O15212 129 aa18.89■□□□□ 0.61
SNX5-213ENST00000486039 SCRG1O75711 98 aa18.89■□□□□ 0.61
SNX5-213ENST00000486039 ESR1P03372 595 aa18.89■□□□□ 0.61
SNX5-213ENST00000486039 FAM87AP0C7U9 286 aa18.89■□□□□ 0.61
SNX5-213ENST00000486039 CCNYL3P0C7X3 344 aa18.89■□□□□ 0.61
SNX5-213ENST00000486039 MSL3P1P0C860 447 aa18.89■□□□□ 0.61
SNX5-213ENST00000486039 SFTPCP11686 197 aa18.89■□□□□ 0.61
SNX5-213ENST00000486039 RAB28P51157 221 aa18.89■□□□□ 0.61
SNX5-213ENST00000486039 CTBP1Q13363 440 aa18.89■□□□□ 0.61
SNX5-213ENST00000486039 GBX1Q14549 363 aa18.89■□□□□ 0.61
SNX5-213ENST00000486039 ZIC1Q15915 447 aa18.89■□□□□ 0.61
SNX5-213ENST00000486039 PLEKHS1Q5SXH7 462 aa18.89■□□□□ 0.61
SNX5-213ENST00000486039 ZNF470Q6ECI4 717 aa18.89■□□□□ 0.61
SNX5-213ENST00000486039 CDHR3Q6ZTQ4 885 aa18.89■□□□□ 0.61
SNX5-213ENST00000486039 TMEM126BQ8IUX1 230 aa18.89■□□□□ 0.61
SNX5-213ENST00000486039 DCUN1D3Q8IWE4 304 aa18.89■□□□□ 0.61
SNX5-213ENST00000486039 DENND6AQ8IWF6 608 aa18.89■□□□□ 0.61
SNX5-213ENST00000486039 KLHL7Q8IXQ5 586 aa18.89■□□□□ 0.61
SNX5-213ENST00000486039 LINC01555Q8NAE3 123 aa18.89■□□□□ 0.61
SNX5-213ENST00000486039 SLC38A9Q8NBW4 561 aa18.89■□□□□ 0.61
SNX5-213ENST00000486039 OR1L3Q8NH93 324 aa18.89■□□□□ 0.61
SNX5-213ENST00000486039 FAM136AQ96C01 138 aa18.89■□□□□ 0.61
SNX5-213ENST00000486039 IL17FQ96PD4 163 aa18.89■□□□□ 0.61
SNX5-213ENST00000486039 SYTL2Q9HCH5 934 aa18.89■□□□□ 0.61
SNX5-213ENST00000486039 FAM60AQ9NP50 221 aa18.89■□□□□ 0.61
SNX5-213ENST00000486039 STARD5Q9NSY2 213 aa18.89■□□□□ 0.61
SNX5-213ENST00000486039 INTS10Q9NVR2 710 aaKnown RBP18.89■□□□□ 0.61
SNX5-213ENST00000486039 RUVBL2Q9Y230 463 aaKnown RBP18.89■□□□□ 0.61
SNX5-213ENST00000486039 HEMK1Q9Y5R4 338 aaPredicted RBP18.89■□□□□ 0.61
SNX5-213ENST00000486039 ISM1B1AKI9 464 aa18.88■□□□□ 0.61
SNX5-213ENST00000486039 TMEM150CB9EJG8 249 aa18.88■□□□□ 0.61
SNX5-213ENST00000486039 H3BMM5 538 aa18.88■□□□□ 0.61
SNX5-213ENST00000486039 PYCARD-AS1I3L0S3 204 aa18.88■□□□□ 0.61
SNX5-213ENST00000486039 KDM1AO60341 852 aa18.88■□□□□ 0.61
SNX5-213ENST00000486039 CPNE3O75131 537 aaKnown RBP18.88■□□□□ 0.61
SNX5-213ENST00000486039 RPN2P04844 631 aa18.88■□□□□ 0.61
SNX5-213ENST00000486039 PRKAR1AP10644 381 aa18.88■□□□□ 0.61
SNX5-213ENST00000486039 PKMP14618 531 aaKnown RBP18.88■□□□□ 0.61
SNX5-213ENST00000486039 TCN2P20062 427 aa18.88■□□□□ 0.61
SNX5-213ENST00000486039 CHRM3P20309 590 aa18.88■□□□□ 0.61
SNX5-213ENST00000486039 OAS2P29728 719 aaKnown RBP18.88■□□□□ 0.61
SNX5-213ENST00000486039 CDC20Q12834 499 aa18.88■□□□□ 0.61
SNX5-213ENST00000486039 THOC5Q13769 683 aaKnown RBP18.88■□□□□ 0.61
SNX5-213ENST00000486039 ATP1A1-AS1Q5TC04 95 aa18.88■□□□□ 0.61
SNX5-213ENST00000486039 FAM199XQ6PEV8 388 aaPredicted RBP18.88■□□□□ 0.61
SNX5-213ENST00000486039 PRICKLE2Q7Z3G6 844 aa18.88■□□□□ 0.61
SNX5-213ENST00000486039 C19orf47Q8N9M1 422 aaKnown RBP18.88■□□□□ 0.61
SNX5-213ENST00000486039 CT55Q8WUE5 264 aa18.88■□□□□ 0.61
SNX5-213ENST00000486039 FANCEQ9HB96 536 aa18.88■□□□□ 0.61
SNX5-213ENST00000486039 FBXO6Q9NRD1 293 aaPredicted RBP18.88■□□□□ 0.61
SNX5-213ENST00000486039 FAM169AQ9Y6X4 670 aa18.88■□□□□ 0.61
SNX5-213ENST00000486039 SETXQ7Z333 2677 aaKnown RBP18.87■□□□□ 0.61
SNX5-213ENST00000486039 A0A0J9YY10 115 aa18.87■□□□□ 0.61
SNX5-213ENST00000486039 CTAGE9A4FU28 777 aa18.87■□□□□ 0.61
SNX5-213ENST00000486039 HCRTR1O43613 425 aa18.87■□□□□ 0.61
SNX5-213ENST00000486039 BANF1O75531 89 aa18.87■□□□□ 0.61
SNX5-213ENST00000486039 C1orf105O95561 183 aa18.87■□□□□ 0.61
SNX5-213ENST00000486039 CD9P21926 228 aa18.87■□□□□ 0.61
SNX5-213ENST00000486039 BDKRB1P46663 353 aa18.87■□□□□ 0.61
SNX5-213ENST00000486039 DHX9Q08211 1270 aaKnown RBP18.87■□□□□ 0.61
SNX5-213ENST00000486039 GPS2Q13227 327 aa18.87■□□□□ 0.61
SNX5-213ENST00000486039 DNASE1L3Q13609 305 aa18.87■□□□□ 0.61
SNX5-213ENST00000486039 KIR2DS3Q14952 304 aa18.87■□□□□ 0.61
SNX5-213ENST00000486039 LONRF1Q17RB8 773 aa18.87■□□□□ 0.61
SNX5-213ENST00000486039 CCSMST1Q4G0I0 132 aa18.87■□□□□ 0.61
SNX5-213ENST00000486039 MSS51Q4VC12 460 aa18.87■□□□□ 0.61
SNX5-213ENST00000486039 IZUMO3Q5VZ72 239 aa18.87■□□□□ 0.61
SNX5-213ENST00000486039 PCGF5Q86SE9 256 aa18.87■□□□□ 0.61
SNX5-213ENST00000486039 HOOK3Q86VS8 718 aa18.87■□□□□ 0.61
SNX5-213ENST00000486039 SPNS2Q8IVW8 549 aa18.87■□□□□ 0.61
SNX5-213ENST00000486039 FAM20CQ8IXL6 584 aa18.87■□□□□ 0.61
SNX5-213ENST00000486039 C2orf73Q8N5S3 287 aaPredicted RBP18.87■□□□□ 0.61
SNX5-213ENST00000486039 GSDMBQ8TAX9 411 aa18.87■□□□□ 0.61
SNX5-213ENST00000486039 RUFY1Q96T51 708 aa18.87■□□□□ 0.61
SNX5-213ENST00000486039 C20orf96Q9NUD7 363 aaPredicted RBP18.87■□□□□ 0.61
SNX5-213ENST00000486039 VPS9D1Q9Y2B5 631 aa18.87■□□□□ 0.61
SNX5-213ENST00000486039 MED16Q9Y2X0 877 aa18.87■□□□□ 0.61
SNX5-213ENST00000486039 PCDHB3Q9Y5E6 796 aa18.87■□□□□ 0.61
SNX5-213ENST00000486039 PCDHGA6Q9Y5G7 932 aa18.87■□□□□ 0.61
SNX5-213ENST00000486039 ASH1LQ9NR48 2969 aaKnown RBP18.87■□□□□ 0.61
SNX5-213ENST00000486039 KRT87PA6NCN2 255 aa18.86■□□□□ 0.61
SNX5-213ENST00000486039 RASGRF2O14827 1237 aa18.86■□□□□ 0.61
SNX5-213ENST00000486039 MAP3K7O43318 606 aa18.86■□□□□ 0.61
SNX5-213ENST00000486039 KATNA1O75449 491 aa18.86■□□□□ 0.61
SNX5-213ENST00000486039 SLC1A2P43004 574 aa18.86■□□□□ 0.61
SNX5-213ENST00000486039 GABRA4P48169 554 aa18.86■□□□□ 0.61
SNX5-213ENST00000486039 MC1RQ01726 317 aa18.86■□□□□ 0.61
SNX5-213ENST00000486039 SLC5A12Q1EHB4 618 aa18.86■□□□□ 0.61
SNX5-213ENST00000486039 CRTC2Q53ET0 693 aaPredicted RBP18.86■□□□□ 0.61
SNX5-213ENST00000486039 ACSBG2Q5FVE4 666 aa18.86■□□□□ 0.61
SNX5-213ENST00000486039 C16orf46Q6P387 395 aa18.86■□□□□ 0.61
SNX5-213ENST00000486039 ZNF549Q6P9A3 640 aa18.86■□□□□ 0.61
SNX5-213ENST00000486039 BORAQ6PGQ7 559 aa18.86■□□□□ 0.61
SNX5-213ENST00000486039 CNSTQ6PJW8 725 aa18.86■□□□□ 0.61
SNX5-213ENST00000486039 ZNF517Q6ZMY9 492 aaPredicted RBP18.86■□□□□ 0.61
SNX5-213ENST00000486039 ZBTB2Q8N680 514 aa18.86■□□□□ 0.61
SNX5-213ENST00000486039 OR2L8Q8NGY9 312 aa18.86■□□□□ 0.61
SNX5-213ENST00000486039 SKA2Q8WVK7 121 aaPredicted RBP18.86■□□□□ 0.61
SNX5-213ENST00000486039 RAD51AP1Q96B01 352 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms