RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 USP7Q93009 1102 aa17.23■□□□□ 0.35
SREBF1-213ENST00000485080 FAM136AQ96C01 138 aa17.23■□□□□ 0.35
SREBF1-213ENST00000485080 MAP3K3Q99759 626 aa17.23■□□□□ 0.35
SREBF1-213ENST00000485080 RAB11FIP5Q9BXF6 653 aa17.23■□□□□ 0.35
SREBF1-213ENST00000485080 CHRNA10Q9GZZ6 450 aa17.23■□□□□ 0.35
SREBF1-213ENST00000485080 LRRC4CQ9HCJ2 640 aa17.23■□□□□ 0.35
SREBF1-213ENST00000485080 SLC17A6Q9P2U8 582 aa17.23■□□□□ 0.35
SREBF1-213ENST00000485080 TRMT6Q9UJA5 497 aaKnown RBP17.23■□□□□ 0.35
SREBF1-213ENST00000485080 BTRCQ9Y297 605 aa17.23■□□□□ 0.35
SREBF1-213ENST00000485080 TDRKHQ9Y2W6 561 aaKnown RBP17.23■□□□□ 0.35
SREBF1-213ENST00000485080 VWA7Q9Y334 891 aa17.23■□□□□ 0.35
SREBF1-213ENST00000485080 PSAT1Q9Y617 370 aa17.23■□□□□ 0.35
SREBF1-213ENST00000485080 NFS1Q9Y697 457 aa17.23■□□□□ 0.35
SREBF1-213ENST00000485080 SRRM3A6NNA2 597 aaPredicted RBP17.22■□□□□ 0.35
SREBF1-213ENST00000485080 EFCAB7A8K855 629 aa17.22■□□□□ 0.35
SREBF1-213ENST00000485080 GFYI3L273 518 aa17.22■□□□□ 0.35
SREBF1-213ENST00000485080 RASGRF2O14827 1237 aa17.22■□□□□ 0.35
SREBF1-213ENST00000485080 ZNF500O60304 480 aaPredicted RBP17.22■□□□□ 0.35
SREBF1-213ENST00000485080 ZBTB11O95625 1053 aaPredicted RBP17.22■□□□□ 0.35
SREBF1-213ENST00000485080 CHRM5P08912 532 aaPredicted RBP17.22■□□□□ 0.35
SREBF1-213ENST00000485080 MSL3P1P0C860 447 aa17.22■□□□□ 0.35
SREBF1-213ENST00000485080 CDKN2DP55273 166 aa17.22■□□□□ 0.35
SREBF1-213ENST00000485080 CUL1Q13616 776 aa17.22■□□□□ 0.35
SREBF1-213ENST00000485080 IL11RAQ14626 422 aa17.22■□□□□ 0.35
SREBF1-213ENST00000485080 KIR2DS3Q14952 304 aa17.22■□□□□ 0.35
SREBF1-213ENST00000485080 RBM20Q5T481 1227 aaKnown RBP17.22■□□□□ 0.35
SREBF1-213ENST00000485080 FAM45BPQ6NSW5 357 aa17.22■□□□□ 0.35
SREBF1-213ENST00000485080 CYB5D1Q6P9G0 228 aa17.22■□□□□ 0.35
SREBF1-213ENST00000485080 BPHLQ86WA6 291 aaPredicted RBP17.22■□□□□ 0.35
SREBF1-213ENST00000485080 ZC3HC1Q86WB0 502 aaKnown RBP17.22■□□□□ 0.35
SREBF1-213ENST00000485080 D2HGDHQ8N465 521 aa17.22■□□□□ 0.35
SREBF1-213ENST00000485080 OR2L8Q8NGY9 312 aa17.22■□□□□ 0.35
SREBF1-213ENST00000485080 CFAP61Q8NHU2 1237 aa17.22■□□□□ 0.35
SREBF1-213ENST00000485080 FAM45AQ8TCE6 357 aa17.22■□□□□ 0.35
SREBF1-213ENST00000485080 CDKL2Q92772 493 aa17.22■□□□□ 0.35
SREBF1-213ENST00000485080 DPH1Q9BZG8 443 aa17.22■□□□□ 0.35
SREBF1-213ENST00000485080 RHOJQ9H4E5 214 aa17.22■□□□□ 0.35
SREBF1-213ENST00000485080 XKR8Q9H6D3 395 aa17.22■□□□□ 0.35
SREBF1-213ENST00000485080 SMYD2Q9NRG4 433 aa17.22■□□□□ 0.35
SREBF1-213ENST00000485080 SLC39A1Q9NY26 324 aa17.22■□□□□ 0.35
SREBF1-213ENST00000485080 ACTR10Q9NZ32 417 aa17.22■□□□□ 0.35
SREBF1-213ENST00000485080 MTRF1LQ9UGC7 380 aaKnown RBP17.22■□□□□ 0.35
SREBF1-213ENST00000485080 SSUH2Q9Y2M2 353 aa17.22■□□□□ 0.35
SREBF1-213ENST00000485080 RAXQ9Y2V3 346 aa17.22■□□□□ 0.35
SREBF1-213ENST00000485080 SEC16AO15027 2179 aa17.21■□□□□ 0.35
SREBF1-213ENST00000485080 PIPSLA2A3N6 862 aa17.21■□□□□ 0.35
SREBF1-213ENST00000485080 MYO1CO00159 1063 aa17.21■□□□□ 0.35
SREBF1-213ENST00000485080 FKBP9O95302 570 aa17.21■□□□□ 0.35
SREBF1-213ENST00000485080 ERGP11308 486 aa17.21■□□□□ 0.35
SREBF1-213ENST00000485080 FDXRP22570 491 aa17.21■□□□□ 0.35
SREBF1-213ENST00000485080 ECHS1P30084 290 aa17.21■□□□□ 0.35
SREBF1-213ENST00000485080 RGS4P49798 205 aa17.21■□□□□ 0.35
SREBF1-213ENST00000485080 MAPK10P53779 464 aa17.21■□□□□ 0.35
SREBF1-213ENST00000485080 HSD11B2P80365 405 aa17.21■□□□□ 0.35
SREBF1-213ENST00000485080 DCAF12Q5T6F0 453 aa17.21■□□□□ 0.35
SREBF1-213ENST00000485080 HECTD2Q5U5R9 776 aa17.21■□□□□ 0.35
SREBF1-213ENST00000485080 SPESP1Q6UW49 350 aa17.21■□□□□ 0.35
SREBF1-213ENST00000485080 CEACAM20Q6UY09 585 aa17.21■□□□□ 0.35
SREBF1-213ENST00000485080 STRA8Q7Z7C7 330 aa17.21■□□□□ 0.35
SREBF1-213ENST00000485080 CCDC25Q86WR0 208 aa17.21■□□□□ 0.35
SREBF1-213ENST00000485080 FAM129CQ86XR2 697 aa17.21■□□□□ 0.35
SREBF1-213ENST00000485080 LINC01555Q8NAE3 123 aa17.21■□□□□ 0.35
SREBF1-213ENST00000485080 FLVCR1-AS1Q8TAF5 88 aa17.21■□□□□ 0.35
SREBF1-213ENST00000485080 SKA2Q8WVK7 121 aaPredicted RBP17.21■□□□□ 0.35
SREBF1-213ENST00000485080 SLC22A18Q96BI1 424 aa17.21■□□□□ 0.35
SREBF1-213ENST00000485080 PDLIM5Q96HC4 596 aaKnown RBP17.21■□□□□ 0.35
SREBF1-213ENST00000485080 NDNQ99608 321 aa17.21■□□□□ 0.35
SREBF1-213ENST00000485080 NRTNQ99748 197 aa17.21■□□□□ 0.35
SREBF1-213ENST00000485080 SPATA7Q9P0W8 599 aa17.21■□□□□ 0.35
SREBF1-213ENST00000485080 ITPR1Q14643 2758 aa17.21■□□□□ 0.35
SREBF1-213ENST00000485080 GSAPA4D1B5 854 aa17.2■□□□□ 0.34
SREBF1-213ENST00000485080 ARHGEF33A8MVX0 844 aa17.2■□□□□ 0.34
SREBF1-213ENST00000485080 RRP8O43159 456 aaKnown RBP17.2■□□□□ 0.34
SREBF1-213ENST00000485080 PRAMEF10O60809 474 aa17.2■□□□□ 0.34
SREBF1-213ENST00000485080 CATP04040 527 aaKnown RBP17.2■□□□□ 0.34
SREBF1-213ENST00000485080 STX2P32856 288 aa17.2■□□□□ 0.34
SREBF1-213ENST00000485080 HSD17B2P37059 387 aa17.2■□□□□ 0.34
SREBF1-213ENST00000485080 NAB1Q13506 487 aa17.2■□□□□ 0.34
SREBF1-213ENST00000485080 ARHGAP19Q14CB8 494 aa17.2■□□□□ 0.34
SREBF1-213ENST00000485080 CYP2A13Q16696 494 aa17.2■□□□□ 0.34
SREBF1-213ENST00000485080 SLC5A12Q1EHB4 618 aa17.2■□□□□ 0.34
SREBF1-213ENST00000485080 PAQR3Q6TCH7 311 aa17.2■□□□□ 0.34
SREBF1-213ENST00000485080 DTX1Q86Y01 620 aa17.2■□□□□ 0.34
SREBF1-213ENST00000485080 CPNE9Q8IYJ1 553 aa17.2■□□□□ 0.34
SREBF1-213ENST00000485080 RAB42Q8N4Z0 105 aa17.2■□□□□ 0.34
SREBF1-213ENST00000485080 DENND1AQ8TEH3 1009 aa17.2■□□□□ 0.34
SREBF1-213ENST00000485080 FCRL4Q96PJ5 515 aa17.2■□□□□ 0.34
SREBF1-213ENST00000485080 OR2A14Q96R47 310 aa17.2■□□□□ 0.34
SREBF1-213ENST00000485080 FMO2Q99518 471 aa17.2■□□□□ 0.34
SREBF1-213ENST00000485080 CPNE1Q99829 537 aa17.2■□□□□ 0.34
SREBF1-213ENST00000485080 FUT8Q9BYC5 575 aa17.2■□□□□ 0.34
SREBF1-213ENST00000485080 SPRY4Q9C004 299 aa17.2■□□□□ 0.34
SREBF1-213ENST00000485080 SYTL2Q9HCH5 934 aa17.2■□□□□ 0.34
SREBF1-213ENST00000485080 PCDHB11Q9Y5F2 797 aa17.2■□□□□ 0.34
SREBF1-213ENST00000485080 B3GALT1Q9Y5Z6 326 aa17.2■□□□□ 0.34
SREBF1-213ENST00000485080 CXorf49A8MYA2 514 aaPredicted RBP17.19■□□□□ 0.34
SREBF1-213ENST00000485080 POLR1CO15160 346 aaPredicted RBP17.19■□□□□ 0.34
SREBF1-213ENST00000485080 PRICKLE3O43900 615 aaPredicted RBP17.19■□□□□ 0.34
SREBF1-213ENST00000485080 TSPAN12O95859 305 aa17.19■□□□□ 0.34
SREBF1-213ENST00000485080 FGF5P12034 268 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms