RNA–Protein interactions for RNA: ENST00000484246.5

UPF3A-208, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 699 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-208ENST00000484246 ASPMQ8IZT6 3477 aa15.4■□□□□ 0.06
UPF3A-208ENST00000484246 FRYQ5TBA9 3013 aa15.4■□□□□ 0.06
UPF3A-208ENST00000484246 FREM2Q5SZK8 3169 aa15.39■□□□□ 0.05
UPF3A-208ENST00000484246 IGHV5-51A0A0C4DH38 117 aa15.39■□□□□ 0.05
UPF3A-208ENST00000484246 GFYI3L273 518 aa15.39■□□□□ 0.05
UPF3A-208ENST00000484246 MYO1CO00159 1063 aa15.39■□□□□ 0.05
UPF3A-208ENST00000484246 RASGRF2O14827 1237 aa15.39■□□□□ 0.05
UPF3A-208ENST00000484246 KIF1CO43896 1103 aaKnown RBP15.39■□□□□ 0.05
UPF3A-208ENST00000484246 RASSF9O75901 435 aa15.39■□□□□ 0.05
UPF3A-208ENST00000484246 CHRM5P08912 532 aaPredicted RBP15.39■□□□□ 0.05
UPF3A-208ENST00000484246 POLR2CP19387 275 aaPredicted RBP15.39■□□□□ 0.05
UPF3A-208ENST00000484246 SLC5A2P31639 672 aa15.39■□□□□ 0.05
UPF3A-208ENST00000484246 STX2P32856 288 aa15.39■□□□□ 0.05
UPF3A-208ENST00000484246 EIF2S3P41091 472 aaKnown RBP15.39■□□□□ 0.05
UPF3A-208ENST00000484246 CDKN2DP55273 166 aa15.39■□□□□ 0.05
UPF3A-208ENST00000484246 NAB1Q13506 487 aa15.39■□□□□ 0.05
UPF3A-208ENST00000484246 CUL1Q13616 776 aa15.39■□□□□ 0.05
UPF3A-208ENST00000484246 KIR2DS3Q14952 304 aa15.39■□□□□ 0.05
UPF3A-208ENST00000484246 TMEM164Q5U3C3 297 aa15.39■□□□□ 0.05
UPF3A-208ENST00000484246 HECTD2Q5U5R9 776 aa15.39■□□□□ 0.05
UPF3A-208ENST00000484246 CYB5D1Q6P9G0 228 aa15.39■□□□□ 0.05
UPF3A-208ENST00000484246 TTC23LQ6PF05 361 aa15.39■□□□□ 0.05
UPF3A-208ENST00000484246 C3orf62Q6ZUJ4 267 aa15.39■□□□□ 0.05
UPF3A-208ENST00000484246 D2HGDHQ8N465 521 aa15.39■□□□□ 0.05
UPF3A-208ENST00000484246 ZNF248Q8NDW4 579 aa15.39■□□□□ 0.05
UPF3A-208ENST00000484246 OR2L8Q8NGY9 312 aa15.39■□□□□ 0.05
UPF3A-208ENST00000484246 ASPSCR1Q9BZE9 553 aa15.39■□□□□ 0.05
UPF3A-208ENST00000484246 XKR8Q9H6D3 395 aa15.39■□□□□ 0.05
UPF3A-208ENST00000484246 LRRC4CQ9HCJ2 640 aa15.39■□□□□ 0.05
UPF3A-208ENST00000484246 SMYD2Q9NRG4 433 aa15.39■□□□□ 0.05
UPF3A-208ENST00000484246 OCIAD1Q9NX40 245 aa15.39■□□□□ 0.05
UPF3A-208ENST00000484246 RAXQ9Y2V3 346 aa15.39■□□□□ 0.05
UPF3A-208ENST00000484246 NFS1Q9Y697 457 aa15.39■□□□□ 0.05
UPF3A-208ENST00000484246 PIPSLA2A3N6 862 aa15.38■□□□□ 0.05
UPF3A-208ENST00000484246 GSAPA4D1B5 854 aa15.38■□□□□ 0.05
UPF3A-208ENST00000484246 SRRM3A6NNA2 597 aaPredicted RBP15.38■□□□□ 0.05
UPF3A-208ENST00000484246 A8MU76 341 aa15.38■□□□□ 0.05
UPF3A-208ENST00000484246 ARHGEF33A8MVX0 844 aa15.38■□□□□ 0.05
UPF3A-208ENST00000484246 PRAMEF10O60809 474 aa15.38■□□□□ 0.05
UPF3A-208ENST00000484246 FKBP9O95302 570 aa15.38■□□□□ 0.05
UPF3A-208ENST00000484246 ZBTB11O95625 1053 aaPredicted RBP15.38■□□□□ 0.05
UPF3A-208ENST00000484246 CATP04040 527 aaKnown RBP15.38■□□□□ 0.05
UPF3A-208ENST00000484246 PRDX3P30048 256 aaKnown RBP15.38■□□□□ 0.05
UPF3A-208ENST00000484246 RGS4P49798 205 aa15.38■□□□□ 0.05
UPF3A-208ENST00000484246 SP140Q13342 867 aa15.38■□□□□ 0.05
UPF3A-208ENST00000484246 IL11RAQ14626 422 aa15.38■□□□□ 0.05
UPF3A-208ENST00000484246 ARHGAP19Q14CB8 494 aa15.38■□□□□ 0.05
UPF3A-208ENST00000484246 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.38■□□□□ 0.05
UPF3A-208ENST00000484246 FOXR1Q6PIV2 292 aa15.38■□□□□ 0.05
UPF3A-208ENST00000484246 SPESP1Q6UW49 350 aa15.38■□□□□ 0.05
UPF3A-208ENST00000484246 CYHR1Q6ZMK1 362 aa15.38■□□□□ 0.05
UPF3A-208ENST00000484246 STRA8Q7Z7C7 330 aa15.38■□□□□ 0.05
UPF3A-208ENST00000484246 CCDC25Q86WR0 208 aa15.38■□□□□ 0.05
UPF3A-208ENST00000484246 FAM129CQ86XR2 697 aa15.38■□□□□ 0.05
UPF3A-208ENST00000484246 CPNE9Q8IYJ1 553 aa15.38■□□□□ 0.05
UPF3A-208ENST00000484246 LINC01555Q8NAE3 123 aa15.38■□□□□ 0.05
UPF3A-208ENST00000484246 CFAP61Q8NHU2 1237 aa15.38■□□□□ 0.05
UPF3A-208ENST00000484246 SKA2Q8WVK7 121 aaPredicted RBP15.38■□□□□ 0.05
UPF3A-208ENST00000484246 ASB11Q8WXH4 323 aa15.38■□□□□ 0.05
UPF3A-208ENST00000484246 USP7Q93009 1102 aa15.38■□□□□ 0.05
UPF3A-208ENST00000484246 FMO2Q99518 471 aa15.38■□□□□ 0.05
UPF3A-208ENST00000484246 NRTNQ99748 197 aa15.38■□□□□ 0.05
UPF3A-208ENST00000484246 CPNE1Q99829 537 aa15.38■□□□□ 0.05
UPF3A-208ENST00000484246 FUT8Q9BYC5 575 aa15.38■□□□□ 0.05
UPF3A-208ENST00000484246 SLC39A1Q9NY26 324 aa15.38■□□□□ 0.05
UPF3A-208ENST00000484246 FOXJ2Q9P0K8 574 aa15.38■□□□□ 0.05
UPF3A-208ENST00000484246 RUVBL2Q9Y230 463 aaKnown RBP15.38■□□□□ 0.05
UPF3A-208ENST00000484246 TDRKHQ9Y2W6 561 aaKnown RBP15.38■□□□□ 0.05
UPF3A-208ENST00000484246 VWA7Q9Y334 891 aa15.38■□□□□ 0.05
UPF3A-208ENST00000484246 PIKFYVEQ9Y2I7 2098 aa15.38■□□□□ 0.05
UPF3A-208ENST00000484246 APC2O95996 2303 aa15.38■□□□□ 0.05
UPF3A-208ENST00000484246 UNC13CQ8NB66 2214 aa15.37■□□□□ 0.05
UPF3A-208ENST00000484246 TSPAN12O95859 305 aa15.37■□□□□ 0.05
UPF3A-208ENST00000484246 FGF5P12034 268 aa15.37■□□□□ 0.05
UPF3A-208ENST00000484246 UGT2B7P16662 529 aa15.37■□□□□ 0.05
UPF3A-208ENST00000484246 PEBP1P30086 187 aaKnown RBP15.37■□□□□ 0.05
UPF3A-208ENST00000484246 GP5P40197 560 aa15.37■□□□□ 0.05
UPF3A-208ENST00000484246 ABCG1P45844 678 aa15.37■□□□□ 0.05
UPF3A-208ENST00000484246 BDKRB1P46663 353 aa15.37■□□□□ 0.05
UPF3A-208ENST00000484246 MAPK10P53779 464 aa15.37■□□□□ 0.05
UPF3A-208ENST00000484246 HSD11B2P80365 405 aa15.37■□□□□ 0.05
UPF3A-208ENST00000484246 CYP2A13Q16696 494 aa15.37■□□□□ 0.05
UPF3A-208ENST00000484246 SLC5A12Q1EHB4 618 aa15.37■□□□□ 0.05
UPF3A-208ENST00000484246 DCAF12Q5T6F0 453 aa15.37■□□□□ 0.05
UPF3A-208ENST00000484246 ANKS6Q68DC2 871 aa15.37■□□□□ 0.05
UPF3A-208ENST00000484246 CEACAM20Q6UY09 585 aa15.37■□□□□ 0.05
UPF3A-208ENST00000484246 BPHLQ86WA6 291 aaPredicted RBP15.37■□□□□ 0.05
UPF3A-208ENST00000484246 DTX1Q86Y01 620 aa15.37■□□□□ 0.05
UPF3A-208ENST00000484246 RAB42Q8N4Z0 105 aa15.37■□□□□ 0.05
UPF3A-208ENST00000484246 DENND1AQ8TEH3 1009 aa15.37■□□□□ 0.05
UPF3A-208ENST00000484246 PMEPA1Q969W9 287 aa15.37■□□□□ 0.05
UPF3A-208ENST00000484246 SLC22A18Q96BI1 424 aa15.37■□□□□ 0.05
UPF3A-208ENST00000484246 VPS39Q96JC1 886 aa15.37■□□□□ 0.05
UPF3A-208ENST00000484246 FCRL4Q96PJ5 515 aa15.37■□□□□ 0.05
UPF3A-208ENST00000484246 OR2A14Q96R47 310 aa15.37■□□□□ 0.05
UPF3A-208ENST00000484246 OLFM1Q99784 485 aa15.37■□□□□ 0.05
UPF3A-208ENST00000484246 DPH1Q9BZG8 443 aa15.37■□□□□ 0.05
UPF3A-208ENST00000484246 SPRY4Q9C004 299 aa15.37■□□□□ 0.05
UPF3A-208ENST00000484246 POPDC3Q9HBV1 291 aa15.37■□□□□ 0.05
UPF3A-208ENST00000484246 SYTL2Q9HCH5 934 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms