RNA–Protein interactions for RNA: ENST00000483326.1

LTN1-205, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 1,753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-205ENST00000483326 RNASEH1O60930 286 aaKnown RBP4.11□□□□□ -1.75
LTN1-205ENST00000483326 VPS4BO75351 444 aa4.11□□□□□ -1.75
LTN1-205ENST00000483326 DDAH2O95865 285 aa4.11□□□□□ -1.75
LTN1-205ENST00000483326 TFAP2AP05549 437 aa4.11□□□□□ -1.75
LTN1-205ENST00000483326 FAM58BPP0C7Q3 252 aa4.11□□□□□ -1.75
LTN1-205ENST00000483326 ITGA2P17301 1181 aa4.11□□□□□ -1.75
LTN1-205ENST00000483326 GM2AP17900 193 aa4.11□□□□□ -1.75
LTN1-205ENST00000483326 F8A1P23610 371 aa4.11□□□□□ -1.75
LTN1-205ENST00000483326 HTR7P34969 479 aa4.11□□□□□ -1.75
LTN1-205ENST00000483326 ASMTP46597 345 aa4.11□□□□□ -1.75
LTN1-205ENST00000483326 SULT1E1P49888 294 aa4.11□□□□□ -1.75
LTN1-205ENST00000483326 ENTPD1P49961 510 aa4.11□□□□□ -1.75
LTN1-205ENST00000483326 HNMTP50135 292 aa4.11□□□□□ -1.75
LTN1-205ENST00000483326 GDI2P50395 445 aaKnown RBP4.11□□□□□ -1.75
LTN1-205ENST00000483326 GATMP50440 423 aa4.11□□□□□ -1.75
LTN1-205ENST00000483326 RAB28P51157 221 aa4.11□□□□□ -1.75
LTN1-205ENST00000483326 ARHGDIBP52566 201 aa4.11□□□□□ -1.75
LTN1-205ENST00000483326 ATXN3P54252 364 aaPredicted RBP4.11□□□□□ -1.75
LTN1-205ENST00000483326 PNLIPRP2P54317 469 aa4.11□□□□□ -1.75
LTN1-205ENST00000483326 LILRA4P59901 499 aa4.11□□□□□ -1.75
LTN1-205ENST00000483326 RAB14P61106 215 aa4.11□□□□□ -1.75
LTN1-205ENST00000483326 PPP2CBP62714 309 aa4.11□□□□□ -1.75
LTN1-205ENST00000483326 PPP2CAP67775 309 aa4.11□□□□□ -1.75
LTN1-205ENST00000483326 RHAGQ02094 409 aa4.11□□□□□ -1.75
LTN1-205ENST00000483326 PPATQ06203 517 aa4.11□□□□□ -1.75
LTN1-205ENST00000483326 GRSF1Q12849 480 aaKnown RBP eCLIP4.11□□□□□ -1.75
LTN1-205ENST00000483326 GRAPQ13588 217 aa4.11□□□□□ -1.75
LTN1-205ENST00000483326 KRR1Q13601 381 aaKnown RBP4.11□□□□□ -1.75
LTN1-205ENST00000483326 FRG1Q14331 258 aaKnown RBP4.11□□□□□ -1.75
LTN1-205ENST00000483326 ACOX1Q15067 660 aa4.11□□□□□ -1.75
LTN1-205ENST00000483326 MAPK6Q16659 721 aa4.11□□□□□ -1.75
LTN1-205ENST00000483326 ASTE1Q2TB18 679 aaPredicted RBP4.11□□□□□ -1.75
LTN1-205ENST00000483326 PTCHD3Q3KNS1 767 aa4.11□□□□□ -1.75
LTN1-205ENST00000483326 SLC39A12Q504Y0 691 aa4.11□□□□□ -1.75
LTN1-205ENST00000483326 UBAP2Q5T6F2 1119 aaKnown RBP4.11□□□□□ -1.75
LTN1-205ENST00000483326 KIAA0930Q6ICG6 404 aaPredicted RBP4.11□□□□□ -1.75
LTN1-205ENST00000483326 PLEKHA7Q6IQ23 1121 aa4.11□□□□□ -1.75
LTN1-205ENST00000483326 MEX3BQ6ZN04 569 aaKnown RBP4.11□□□□□ -1.75
LTN1-205ENST00000483326 GPRIN1Q7Z2K8 1008 aa4.11□□□□□ -1.75
LTN1-205ENST00000483326 HAUS6Q7Z4H7 955 aa4.11□□□□□ -1.75
LTN1-205ENST00000483326 LRRC6Q86X45 466 aa4.11□□□□□ -1.75
LTN1-205ENST00000483326 CNTN4Q8IWV2 1026 aa4.11□□□□□ -1.75
LTN1-205ENST00000483326 KBTBD2Q8IY47 623 aa4.11□□□□□ -1.75
LTN1-205ENST00000483326 MARVELD2Q8N4S9 558 aa4.11□□□□□ -1.75
LTN1-205ENST00000483326 PLD5Q8N7P1 536 aa4.11□□□□□ -1.75
LTN1-205ENST00000483326 CAMKVQ8NCB2 501 aa4.11□□□□□ -1.75
LTN1-205ENST00000483326 PDPRQ8NCN5 879 aa4.11□□□□□ -1.75
LTN1-205ENST00000483326 C7orf57Q8NEG2 295 aa4.11□□□□□ -1.75
LTN1-205ENST00000483326 ZNF420Q8TAQ5 688 aaPredicted RBP4.11□□□□□ -1.75
LTN1-205ENST00000483326 CKAP2Q8WWK9 683 aa4.11□□□□□ -1.75
LTN1-205ENST00000483326 RAB40AQ8WXH6 277 aa4.11□□□□□ -1.75
LTN1-205ENST00000483326 OVCA2Q8WZ82 227 aa4.11□□□□□ -1.75
LTN1-205ENST00000483326 MBD6Q96DN6 1003 aa4.11□□□□□ -1.75
LTN1-205ENST00000483326 MTBPQ96DY7 904 aa4.11□□□□□ -1.75
LTN1-205ENST00000483326 RMND5BQ96G75 393 aaPredicted RBP4.11□□□□□ -1.75
LTN1-205ENST00000483326 NSL1Q96IY1 281 aa4.11□□□□□ -1.75
LTN1-205ENST00000483326 TGS1Q96RS0 853 aaKnown RBP4.11□□□□□ -1.75
LTN1-205ENST00000483326 KRT12Q99456 494 aa4.11□□□□□ -1.75
LTN1-205ENST00000483326 PKP4Q99569 1192 aa4.11□□□□□ -1.75
LTN1-205ENST00000483326 NPAS1Q99742 590 aa4.11□□□□□ -1.75
LTN1-205ENST00000483326 CLSTN3Q9BQT9 956 aa4.11□□□□□ -1.75
LTN1-205ENST00000483326 NUSAP1Q9BXS6 441 aaKnown RBP4.11□□□□□ -1.75
LTN1-205ENST00000483326 CTDSP1Q9GZU7 261 aa4.11□□□□□ -1.75
LTN1-205ENST00000483326 ZMYND12Q9H0C1 365 aa4.11□□□□□ -1.75
LTN1-205ENST00000483326 RBM38Q9H0Z9 239 aaKnown RBP4.11□□□□□ -1.75
LTN1-205ENST00000483326 TMEM245Q9H330 911 aa4.11□□□□□ -1.75
LTN1-205ENST00000483326 DPEP3Q9H4B8 488 aa4.11□□□□□ -1.75
LTN1-205ENST00000483326 SLITRK6Q9H5Y7 841 aa4.11□□□□□ -1.75
LTN1-205ENST00000483326 SLA2Q9H6Q3 261 aa4.11□□□□□ -1.75
LTN1-205ENST00000483326 TRIM45Q9H8W5 580 aaPredicted RBP4.11□□□□□ -1.75
LTN1-205ENST00000483326 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.11□□□□□ -1.75
LTN1-205ENST00000483326 TMOD2Q9NZR1 351 aa4.11□□□□□ -1.75
LTN1-205ENST00000483326 FETUBQ9UGM5 382 aa4.11□□□□□ -1.75
LTN1-205ENST00000483326 FBXO40Q9UH90 709 aa4.11□□□□□ -1.75
LTN1-205ENST00000483326 BCAP29Q9UHQ4 241 aa4.11□□□□□ -1.75
LTN1-205ENST00000483326 CDC42EP3Q9UKI2 254 aa4.11□□□□□ -1.75
LTN1-205ENST00000483326 INTS6Q9UL03 887 aaKnown RBP4.11□□□□□ -1.75
LTN1-205ENST00000483326 MKLN1Q9UL63 735 aa4.11□□□□□ -1.75
LTN1-205ENST00000483326 ZNF175Q9Y473 711 aa4.11□□□□□ -1.75
LTN1-205ENST00000483326 PCDHGA5Q9Y5G8 931 aa4.11□□□□□ -1.75
LTN1-205ENST00000483326 PCDHGA1Q9Y5H4 931 aa4.11□□□□□ -1.75
LTN1-205ENST00000483326 ANKARQ7Z5J8 1434 aa4.11□□□□□ -1.75
LTN1-205ENST00000483326 MYH7P12883 1935 aa4.11□□□□□ -1.75
LTN1-205ENST00000483326 MYH13Q9UKX3 1938 aa4.11□□□□□ -1.75
LTN1-205ENST00000483326 ATP8B3O60423 1300 aa4.11□□□□□ -1.75
LTN1-205ENST00000483326 SETD1AO15047 1707 aaKnown RBP4.1□□□□□ -1.75
LTN1-205ENST00000483326 AKAP12Q02952 1782 aa4.1□□□□□ -1.75
LTN1-205ENST00000483326 DLC1Q96QB1 1528 aa4.1□□□□□ -1.75
LTN1-205ENST00000483326 A0A087WWV3 80 aa4.1□□□□□ -1.75
LTN1-205ENST00000483326 C15orf38-AP3S2A0A0A6YYH1 394 aa4.1□□□□□ -1.75
LTN1-205ENST00000483326 FAM237AA0A1B0GTK4 181 aa4.1□□□□□ -1.75
LTN1-205ENST00000483326 ATP6V1G2-DDX39BF2Z307 99 aa4.1□□□□□ -1.75
LTN1-205ENST00000483326 M0QYT0 321 aa4.1□□□□□ -1.75
LTN1-205ENST00000483326 SLC33A1O00400 549 aaPredicted RBP4.1□□□□□ -1.75
LTN1-205ENST00000483326 NKX2-8O15522 239 aa4.1□□□□□ -1.75
LTN1-205ENST00000483326 PAPSS1O43252 624 aaPredicted RBP4.1□□□□□ -1.75
LTN1-205ENST00000483326 GATCO43716 136 aaKnown RBP4.1□□□□□ -1.75
LTN1-205ENST00000483326 AVILO75366 819 aa4.1□□□□□ -1.75
LTN1-205ENST00000483326 TADA2AO75478 443 aa4.1□□□□□ -1.75
LTN1-205ENST00000483326 CSDE1O75534 798 aaKnown RBP4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms