RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 NVLO15381 856 aaKnown RBP7.6□□□□□ -1.19
SNX13-208ENST00000482558 CD3EAPO15446 510 aaKnown RBP7.6□□□□□ -1.19
SNX13-208ENST00000482558 LDB2O43679 373 aa7.6□□□□□ -1.19
SNX13-208ENST00000482558 VPS4BO75351 444 aa7.6□□□□□ -1.19
SNX13-208ENST00000482558 ENTPD5O75356 428 aa7.6□□□□□ -1.19
SNX13-208ENST00000482558 CNTN5O94779 1100 aa7.6□□□□□ -1.19
SNX13-208ENST00000482558 PIGNO95427 931 aa7.6□□□□□ -1.19
SNX13-208ENST00000482558 TOP3BO95985 862 aaKnown RBP7.6□□□□□ -1.19
SNX13-208ENST00000482558 MMP2P08253 660 aa7.6□□□□□ -1.19
SNX13-208ENST00000482558 CLEC2LP0C7M8 214 aa7.6□□□□□ -1.19
SNX13-208ENST00000482558 ATXN1LP0C7T5 689 aaKnown RBP7.6□□□□□ -1.19
SNX13-208ENST00000482558 IL11P20809 199 aa7.6□□□□□ -1.19
SNX13-208ENST00000482558 IMPDH1P20839 514 aa7.6□□□□□ -1.19
SNX13-208ENST00000482558 ATP6V1C1P21283 382 aa7.6□□□□□ -1.19
SNX13-208ENST00000482558 SAT1P21673 171 aa7.6□□□□□ -1.19
SNX13-208ENST00000482558 SLC7A1P30825 629 aa7.6□□□□□ -1.19
SNX13-208ENST00000482558 CPOXP36551 454 aa7.6□□□□□ -1.19
SNX13-208ENST00000482558 PTDSS1P48651 473 aaKnown RBP7.6□□□□□ -1.19
SNX13-208ENST00000482558 GPR15P49685 360 aa7.6□□□□□ -1.19
SNX13-208ENST00000482558 PGFP49763 221 aa7.6□□□□□ -1.19
SNX13-208ENST00000482558 ATP4BP51164 291 aa7.6□□□□□ -1.19
SNX13-208ENST00000482558 CLCN2P51788 898 aa7.6□□□□□ -1.19
SNX13-208ENST00000482558 TPD52P55327 224 aaPredicted RBP7.6□□□□□ -1.19
SNX13-208ENST00000482558 RPL26P61254 145 aaKnown RBP7.6□□□□□ -1.19
SNX13-208ENST00000482558 MRPS35P82673 323 aaKnown RBP7.6□□□□□ -1.19
SNX13-208ENST00000482558 DSC2Q02487 901 aa7.6□□□□□ -1.19
SNX13-208ENST00000482558 KLF10Q13118 480 aa7.6□□□□□ -1.19
SNX13-208ENST00000482558 STX5Q13190 355 aa7.6□□□□□ -1.19
SNX13-208ENST00000482558 CYLC2Q14093 348 aaPredicted RBP7.6□□□□□ -1.19
SNX13-208ENST00000482558 KPNB1Q14974 876 aaKnown RBP7.6□□□□□ -1.19
SNX13-208ENST00000482558 RCN1Q15293 331 aa7.6□□□□□ -1.19
SNX13-208ENST00000482558 TAF1AQ15573 450 aaPredicted RBP7.6□□□□□ -1.19
SNX13-208ENST00000482558 DLG2Q15700 870 aa7.6□□□□□ -1.19
SNX13-208ENST00000482558 KHDC1Q4VXA5 237 aaKnown RBP7.6□□□□□ -1.19
SNX13-208ENST00000482558 ACSBG2Q5FVE4 666 aa7.6□□□□□ -1.19
SNX13-208ENST00000482558 TECRLQ5HYJ1 363 aa7.6□□□□□ -1.19
SNX13-208ENST00000482558 ADGRF1Q5T601 910 aa7.6□□□□□ -1.19
SNX13-208ENST00000482558 HECTD2Q5U5R9 776 aa7.6□□□□□ -1.19
SNX13-208ENST00000482558 SDHAF4Q5VUM1 108 aa7.6□□□□□ -1.19
SNX13-208ENST00000482558 UGT3A1Q6NUS8 523 aa7.6□□□□□ -1.19
SNX13-208ENST00000482558 ZFP1Q6P2D0 407 aa7.6□□□□□ -1.19
SNX13-208ENST00000482558 AFTPHQ6ULP2 937 aa7.6□□□□□ -1.19
SNX13-208ENST00000482558 DENND6AQ8IWF6 608 aa7.6□□□□□ -1.19
SNX13-208ENST00000482558 RNF168Q8IYW5 571 aaPredicted RBP7.6□□□□□ -1.19
SNX13-208ENST00000482558 STK40Q8N2I9 435 aa7.6□□□□□ -1.19
SNX13-208ENST00000482558 SLC25A41Q8N5S1 370 aa7.6□□□□□ -1.19
SNX13-208ENST00000482558 KYQ8NBH2 561 aa7.6□□□□□ -1.19
SNX13-208ENST00000482558 OR13J1Q8NGT2 312 aa7.6□□□□□ -1.19
SNX13-208ENST00000482558 OR4L1Q8NH43 312 aa7.6□□□□□ -1.19
SNX13-208ENST00000482558 HEXDCQ8WVB3 486 aa7.6□□□□□ -1.19
SNX13-208ENST00000482558 DNAJC9Q8WXX5 260 aa7.6□□□□□ -1.19
SNX13-208ENST00000482558 ST8SIA4Q92187 359 aa7.6□□□□□ -1.19
SNX13-208ENST00000482558 HDAC10Q969S8 669 aa7.6□□□□□ -1.19
SNX13-208ENST00000482558 NXNL1Q96CM4 212 aa7.6□□□□□ -1.19
SNX13-208ENST00000482558 L3HYPDHQ96EM0 354 aa7.6□□□□□ -1.19
SNX13-208ENST00000482558 NAF1Q96HR8 494 aaKnown RBP7.6□□□□□ -1.19
SNX13-208ENST00000482558 IGSF21Q96ID5 467 aa7.6□□□□□ -1.19
SNX13-208ENST00000482558 CCT7Q99832 543 aa7.6□□□□□ -1.19
SNX13-208ENST00000482558 GPATCH1Q9BRR8 931 aaKnown RBP7.6□□□□□ -1.19
SNX13-208ENST00000482558 MCOLN1Q9GZU1 580 aa7.6□□□□□ -1.19
SNX13-208ENST00000482558 TFB2MQ9H5Q4 396 aaKnown RBP7.6□□□□□ -1.19
SNX13-208ENST00000482558 EFCAB1Q9HAE3 211 aa7.6□□□□□ -1.19
SNX13-208ENST00000482558 NLE1Q9NVX2 485 aaPredicted RBP7.6□□□□□ -1.19
SNX13-208ENST00000482558 TMEM45AQ9NWC5 275 aa7.6□□□□□ -1.19
SNX13-208ENST00000482558 UTP6Q9NYH9 597 aaKnown RBP7.6□□□□□ -1.19
SNX13-208ENST00000482558 CPSF2Q9P2I0 782 aaKnown RBP7.6□□□□□ -1.19
SNX13-208ENST00000482558 NUDT5Q9UKK9 219 aa7.6□□□□□ -1.19
SNX13-208ENST00000482558 TBC1D30Q9Y2I9 924 aa7.6□□□□□ -1.19
SNX13-208ENST00000482558 ASB3Q9Y575 518 aa7.6□□□□□ -1.19
SNX13-208ENST00000482558 ATP23Q9Y6H3 246 aa7.6□□□□□ -1.19
SNX13-208ENST00000482558 NUMBLQ9Y6R0 609 aa7.6□□□□□ -1.19
SNX13-208ENST00000482558 GOLGA8TH3BQL2 631 aa7.59□□□□□ -1.19
SNX13-208ENST00000482558 INSIG1O15503 277 aa7.59□□□□□ -1.19
SNX13-208ENST00000482558 DCXO43602 365 aa7.59□□□□□ -1.19
SNX13-208ENST00000482558 PTP4A3O75365 173 aa7.59□□□□□ -1.19
SNX13-208ENST00000482558 B3GALNT1O75752 331 aa7.59□□□□□ -1.19
SNX13-208ENST00000482558 WISP3O95389 354 aaPredicted RBP7.59□□□□□ -1.19
SNX13-208ENST00000482558 RHOCP08134 193 aa7.59□□□□□ -1.19
SNX13-208ENST00000482558 FGF4P08620 206 aa7.59□□□□□ -1.19
SNX13-208ENST00000482558 SBK3P0C264 359 aa7.59□□□□□ -1.19
SNX13-208ENST00000482558 CCDC166P0CW27 439 aa7.59□□□□□ -1.19
SNX13-208ENST00000482558 HSPA1AP0DMV8 641 aaKnown RBP7.59□□□□□ -1.19
SNX13-208ENST00000482558 HSPA1BP0DMV9 641 aaKnown RBP7.59□□□□□ -1.19
SNX13-208ENST00000482558 PORP16435 677 aaPredicted RBP7.59□□□□□ -1.19
SNX13-208ENST00000482558 GM2AP17900 193 aa7.59□□□□□ -1.19
SNX13-208ENST00000482558 FDXRP22570 491 aa7.59□□□□□ -1.19
SNX13-208ENST00000482558 TTPAP49638 278 aa7.59□□□□□ -1.19
SNX13-208ENST00000482558 CLCN4P51793 760 aa7.59□□□□□ -1.19
SNX13-208ENST00000482558 INHBCP55103 352 aa7.59□□□□□ -1.19
SNX13-208ENST00000482558 ADARP55265 1226 aaKnown RBP7.59□□□□□ -1.19
SNX13-208ENST00000482558 SQLEQ14534 574 aa7.59□□□□□ -1.19
SNX13-208ENST00000482558 GPR19Q15760 415 aa7.59□□□□□ -1.19
SNX13-208ENST00000482558 GSTA3Q16772 222 aa7.59□□□□□ -1.19
SNX13-208ENST00000482558 TYSND1Q2T9J0 566 aa7.59□□□□□ -1.19
SNX13-208ENST00000482558 C3orf36Q3SXR2 165 aa7.59□□□□□ -1.19
SNX13-208ENST00000482558 SPATS1Q496A3 300 aa7.59□□□□□ -1.19
SNX13-208ENST00000482558 NADSYN1Q6IA69 706 aa7.59□□□□□ -1.19
SNX13-208ENST00000482558 NAPRTQ6XQN6 538 aa7.59□□□□□ -1.19
SNX13-208ENST00000482558 LRRC74BQ6ZQY2 392 aa7.59□□□□□ -1.19
SNX13-208ENST00000482558 MAVSQ7Z434 540 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms