RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 SPHK1Q9NYA1 384 aa12.98□□□□□ -0.33
CTDSP1-208ENST00000482272 GPN3Q9UHW5 284 aaPredicted RBP12.98□□□□□ -0.33
CTDSP1-208ENST00000482272 TTLL8A6PVC2 850 aa12.97□□□□□ -0.33
CTDSP1-208ENST00000482272 CYSRT1A8MQ03 144 aa12.97□□□□□ -0.33
CTDSP1-208ENST00000482272 CD3EAPO15446 510 aaKnown RBP12.97□□□□□ -0.33
CTDSP1-208ENST00000482272 GPC4O75487 556 aa12.97□□□□□ -0.33
CTDSP1-208ENST00000482272 PDGFAP04085 211 aa12.97□□□□□ -0.33
CTDSP1-208ENST00000482272 CAPN1P07384 714 aa12.97□□□□□ -0.33
CTDSP1-208ENST00000482272 CTSBP07858 339 aa12.97□□□□□ -0.33
CTDSP1-208ENST00000482272 CCR7P32248 378 aa12.97□□□□□ -0.33
CTDSP1-208ENST00000482272 RPL22P35268 128 aaKnown RBP12.97□□□□□ -0.33
CTDSP1-208ENST00000482272 NPY2RP49146 381 aa12.97□□□□□ -0.33
CTDSP1-208ENST00000482272 TTPAP49638 278 aa12.97□□□□□ -0.33
CTDSP1-208ENST00000482272 RAB28P51157 221 aa12.97□□□□□ -0.33
CTDSP1-208ENST00000482272 SSPNQ14714 243 aa12.97□□□□□ -0.33
CTDSP1-208ENST00000482272 NCF4Q15080 339 aa12.97□□□□□ -0.33
CTDSP1-208ENST00000482272 KYNUQ16719 465 aa12.97□□□□□ -0.33
CTDSP1-208ENST00000482272 SLC5A12Q1EHB4 618 aa12.97□□□□□ -0.33
CTDSP1-208ENST00000482272 MLIPQ5VWP3 458 aa12.97□□□□□ -0.33
CTDSP1-208ENST00000482272 PAPD7Q5XG87 772 aaKnown RBP12.97□□□□□ -0.33
CTDSP1-208ENST00000482272 CPZQ66K79 652 aa12.97□□□□□ -0.33
CTDSP1-208ENST00000482272 RHBDD2Q6NTF9 364 aa12.97□□□□□ -0.33
CTDSP1-208ENST00000482272 TTC23LQ6PF05 361 aa12.97□□□□□ -0.33
CTDSP1-208ENST00000482272 DRICH1Q6PGQ1 229 aaPredicted RBP12.97□□□□□ -0.33
CTDSP1-208ENST00000482272 FAM198BQ6UWH4 519 aa12.97□□□□□ -0.33
CTDSP1-208ENST00000482272 GSTA5Q7RTV2 222 aa12.97□□□□□ -0.33
CTDSP1-208ENST00000482272 LDB1Q86U70 411 aaPredicted RBP12.97□□□□□ -0.33
CTDSP1-208ENST00000482272 TRIM73Q86UV7 250 aa12.97□□□□□ -0.33
CTDSP1-208ENST00000482272 HPS6Q86YV9 775 aa12.97□□□□□ -0.33
CTDSP1-208ENST00000482272 VRK3Q8IV63 474 aa12.97□□□□□ -0.33
CTDSP1-208ENST00000482272 CFAP61Q8NHU2 1237 aa12.97□□□□□ -0.33
CTDSP1-208ENST00000482272 FLVCR1-AS1Q8TAF5 88 aa12.97□□□□□ -0.33
CTDSP1-208ENST00000482272 GSDMBQ8TAX9 411 aa12.97□□□□□ -0.33
CTDSP1-208ENST00000482272 PROKR1Q8TCW9 393 aa12.97□□□□□ -0.33
CTDSP1-208ENST00000482272 MIB2Q96AX9 1013 aa12.97□□□□□ -0.33
CTDSP1-208ENST00000482272 IP6K3Q96PC2 410 aa12.97□□□□□ -0.33
CTDSP1-208ENST00000482272 PANX3Q96QZ0 392 aa12.97□□□□□ -0.33
CTDSP1-208ENST00000482272 SPRTNQ9H040 489 aaPredicted RBP12.97□□□□□ -0.33
CTDSP1-208ENST00000482272 CATSPERZQ9NTU4 200 aa12.97□□□□□ -0.33
CTDSP1-208ENST00000482272 TXLNGQ9NUQ3 528 aa12.97□□□□□ -0.33
CTDSP1-208ENST00000482272 IRAK4Q9NWZ3 460 aa12.97□□□□□ -0.33
CTDSP1-208ENST00000482272 BFARQ9NZS9 450 aa12.97□□□□□ -0.33
CTDSP1-208ENST00000482272 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.97□□□□□ -0.33
CTDSP1-208ENST00000482272 PLAGL1Q9UM63 463 aa12.97□□□□□ -0.33
CTDSP1-208ENST00000482272 PLCL2Q9UPR0 1127 aa12.97□□□□□ -0.33
CTDSP1-208ENST00000482272 PLAAQ9Y263 795 aa12.97□□□□□ -0.33
CTDSP1-208ENST00000482272 ZKSCAN5Q9Y2L8 839 aa12.97□□□□□ -0.33
CTDSP1-208ENST00000482272 ZNF451Q9Y4E5 1061 aa12.97□□□□□ -0.33
CTDSP1-208ENST00000482272 IQCF5A8MTL0 148 aa12.96□□□□□ -0.33
CTDSP1-208ENST00000482272 PRMT5O14744 637 aaPredicted RBP12.96□□□□□ -0.33
CTDSP1-208ENST00000482272 KPNA5O15131 536 aa12.96□□□□□ -0.33
CTDSP1-208ENST00000482272 ZNF185O15231 689 aa12.96□□□□□ -0.33
CTDSP1-208ENST00000482272 DPM1O60762 260 aa12.96□□□□□ -0.33
CTDSP1-208ENST00000482272 VPS4BO75351 444 aa12.96□□□□□ -0.33
CTDSP1-208ENST00000482272 CBSLP0DN79 551 aa12.96□□□□□ -0.33
CTDSP1-208ENST00000482272 CD9P21926 228 aa12.96□□□□□ -0.33
CTDSP1-208ENST00000482272 PEBP1P30086 187 aaKnown RBP12.96□□□□□ -0.33
CTDSP1-208ENST00000482272 CBSP35520 551 aa12.96□□□□□ -0.33
CTDSP1-208ENST00000482272 GABRA4P48169 554 aa12.96□□□□□ -0.33
CTDSP1-208ENST00000482272 CD97P48960 835 aa12.96□□□□□ -0.33
CTDSP1-208ENST00000482272 SESN2P58004 480 aaPredicted RBP12.96□□□□□ -0.33
CTDSP1-208ENST00000482272 CRADDP78560 199 aa12.96□□□□□ -0.33
CTDSP1-208ENST00000482272 BASP1P80723 227 aaKnown RBP12.96□□□□□ -0.33
CTDSP1-208ENST00000482272 DCDP81605 110 aaKnown RBP12.96□□□□□ -0.33
CTDSP1-208ENST00000482272 TMED2Q15363 201 aa12.96□□□□□ -0.33
CTDSP1-208ENST00000482272 ZIC1Q15915 447 aa12.96□□□□□ -0.33
CTDSP1-208ENST00000482272 DEFB110Q30KQ9 67 aa12.96□□□□□ -0.33
CTDSP1-208ENST00000482272 ZNF385CQ66K41 422 aaPredicted RBP12.96□□□□□ -0.33
CTDSP1-208ENST00000482272 PTRHD1Q6GMV3 140 aaKnown RBP12.96□□□□□ -0.33
CTDSP1-208ENST00000482272 UNC5DQ6UXZ4 953 aa12.96□□□□□ -0.33
CTDSP1-208ENST00000482272 SPNS2Q8IVW8 549 aa12.96□□□□□ -0.33
CTDSP1-208ENST00000482272 TMEM151BQ8IW70 566 aa12.96□□□□□ -0.33
CTDSP1-208ENST00000482272 DNAJC22Q8N4W6 341 aa12.96□□□□□ -0.33
CTDSP1-208ENST00000482272 ZBTB2Q8N680 514 aa12.96□□□□□ -0.33
CTDSP1-208ENST00000482272 EFCAB3Q8N7B9 438 aa12.96□□□□□ -0.33
CTDSP1-208ENST00000482272 DENND1AQ8TEH3 1009 aa12.96□□□□□ -0.33
CTDSP1-208ENST00000482272 NDC1Q9BTX1 674 aa12.96□□□□□ -0.33
CTDSP1-208ENST00000482272 IL22Q9GZX6 179 aa12.96□□□□□ -0.33
CTDSP1-208ENST00000482272 EIF2B3Q9NR50 452 aaKnown RBP12.96□□□□□ -0.33
CTDSP1-208ENST00000482272 INTS7Q9NVH2 962 aaKnown RBP12.96□□□□□ -0.33
CTDSP1-208ENST00000482272 MARCH4Q9P2E8 410 aaPredicted RBP12.96□□□□□ -0.33
CTDSP1-208ENST00000482272 NDOR1Q9UHB4 597 aa12.96□□□□□ -0.33
CTDSP1-208ENST00000482272 SLC39A10Q9ULF5 831 aa12.96□□□□□ -0.33
CTDSP1-208ENST00000482272 VPS4AQ9UN37 437 aa12.96□□□□□ -0.33
CTDSP1-208ENST00000482272 SRPK3Q9UPE1 567 aa12.96□□□□□ -0.33
CTDSP1-208ENST00000482272 CDYLQ9Y232 598 aa12.96□□□□□ -0.33
CTDSP1-208ENST00000482272 MRFAP1Q9Y605 127 aa12.96□□□□□ -0.33
CTDSP1-208ENST00000482272 SPTBP11277 2137 aa12.95□□□□□ -0.34
CTDSP1-208ENST00000482272 A6NL46 340 aa12.95□□□□□ -0.34
CTDSP1-208ENST00000482272 H3BMH7 237 aa12.95□□□□□ -0.34
CTDSP1-208ENST00000482272 PFDN6O15212 129 aa12.95□□□□□ -0.34
CTDSP1-208ENST00000482272 ZSCAN9O15535 394 aaPredicted RBP12.95□□□□□ -0.34
CTDSP1-208ENST00000482272 NDUFS3O75489 264 aa12.95□□□□□ -0.34
CTDSP1-208ENST00000482272 CEACAM4O75871 244 aa12.95□□□□□ -0.34
CTDSP1-208ENST00000482272 SLCO2B1O94956 709 aa12.95□□□□□ -0.34
CTDSP1-208ENST00000482272 S1PR4O95977 384 aa12.95□□□□□ -0.34
CTDSP1-208ENST00000482272 IGHEP01854 428 aa12.95□□□□□ -0.34
CTDSP1-208ENST00000482272 CCDC175P0C221 793 aa12.95□□□□□ -0.34
CTDSP1-208ENST00000482272 AOAHP28039 575 aa12.95□□□□□ -0.34
CTDSP1-208ENST00000482272 PKLRP30613 574 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms