RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 VAPBO95292 243 aa10.11□□□□□ -0.79
CPSF4-212ENST00000482251 WISP1O95388 367 aa10.11□□□□□ -0.79
CPSF4-212ENST00000482251 APOA4P06727 396 aa10.11□□□□□ -0.79
CPSF4-212ENST00000482251 KLK3P07288 261 aaPredicted RBP10.11□□□□□ -0.79
CPSF4-212ENST00000482251 TPSB2P20231 275 aa10.11□□□□□ -0.79
CPSF4-212ENST00000482251 RORAP35398 523 aa10.11□□□□□ -0.79
CPSF4-212ENST00000482251 PPARGP37231 505 aaPredicted RBP10.11□□□□□ -0.79
CPSF4-212ENST00000482251 PTGIRP43119 386 aa10.11□□□□□ -0.79
CPSF4-212ENST00000482251 TTPAP49638 278 aa10.11□□□□□ -0.79
CPSF4-212ENST00000482251 PMS2P54278 862 aa10.11□□□□□ -0.79
CPSF4-212ENST00000482251 FOXL2P58012 376 aa10.11□□□□□ -0.79
CPSF4-212ENST00000482251 KCNJ11Q14654 390 aa10.11□□□□□ -0.79
CPSF4-212ENST00000482251 TPSAB1Q15661 275 aa10.11□□□□□ -0.79
CPSF4-212ENST00000482251 UGT8Q16880 541 aa10.11□□□□□ -0.79
CPSF4-212ENST00000482251 CRTC2Q53ET0 693 aaPredicted RBP10.11□□□□□ -0.79
CPSF4-212ENST00000482251 DNAJC21Q5F1R6 531 aaKnown RBP10.11□□□□□ -0.79
CPSF4-212ENST00000482251 CTSL3PQ5NE16 218 aa10.11□□□□□ -0.79
CPSF4-212ENST00000482251 CASC4Q6P4E1 433 aa10.11□□□□□ -0.79
CPSF4-212ENST00000482251 CNSTQ6PJW8 725 aa10.11□□□□□ -0.79
CPSF4-212ENST00000482251 SYVN1Q86TM6 617 aa10.11□□□□□ -0.79
CPSF4-212ENST00000482251 SPNS2Q8IVW8 549 aa10.11□□□□□ -0.79
CPSF4-212ENST00000482251 DCUN1D3Q8IWE4 304 aa10.11□□□□□ -0.79
CPSF4-212ENST00000482251 GPR135Q8IZ08 494 aa10.11□□□□□ -0.79
CPSF4-212ENST00000482251 LINC01555Q8NAE3 123 aa10.11□□□□□ -0.79
CPSF4-212ENST00000482251 SPRTNQ9H040 489 aaPredicted RBP10.11□□□□□ -0.79
CPSF4-212ENST00000482251 CLMPQ9H6B4 373 aa10.11□□□□□ -0.79
CPSF4-212ENST00000482251 POLG2Q9UHN1 485 aa10.11□□□□□ -0.79
CPSF4-212ENST00000482251 GNPTGQ9UJJ9 305 aa10.11□□□□□ -0.79
CPSF4-212ENST00000482251 TLK1Q9UKI8 766 aa10.11□□□□□ -0.79
CPSF4-212ENST00000482251 NFS1Q9Y697 457 aa10.11□□□□□ -0.79
CPSF4-212ENST00000482251 TNRC6AQ8NDV7 1962 aaKnown RBP10.1□□□□□ -0.79
CPSF4-212ENST00000482251 FER1L5A0AVI2 2057 aa10.1□□□□□ -0.79
CPSF4-212ENST00000482251 NIPSNAP2O75323 286 aa10.1□□□□□ -0.79
CPSF4-212ENST00000482251 GPC4O75487 556 aa10.1□□□□□ -0.79
CPSF4-212ENST00000482251 OR2B3O76000 313 aa10.1□□□□□ -0.79
CPSF4-212ENST00000482251 KRT14P02533 472 aa10.1□□□□□ -0.79
CPSF4-212ENST00000482251 PDGFAP04085 211 aa10.1□□□□□ -0.79
CPSF4-212ENST00000482251 MAGP20916 626 aa10.1□□□□□ -0.79
CPSF4-212ENST00000482251 AOAHP28039 575 aa10.1□□□□□ -0.79
CPSF4-212ENST00000482251 PSMB5P28074 263 aa10.1□□□□□ -0.79
CPSF4-212ENST00000482251 FMO4P31512 558 aa10.1□□□□□ -0.79
CPSF4-212ENST00000482251 NPY2RP49146 381 aa10.1□□□□□ -0.79
CPSF4-212ENST00000482251 RAB28P51157 221 aa10.1□□□□□ -0.79
CPSF4-212ENST00000482251 PLOD1Q02809 727 aaPredicted RBP10.1□□□□□ -0.79
CPSF4-212ENST00000482251 KCNC4Q03721 635 aa10.1□□□□□ -0.79
CPSF4-212ENST00000482251 CCSMST1Q4G0I0 132 aa10.1□□□□□ -0.79
CPSF4-212ENST00000482251 IZUMO3Q5VZ72 239 aa10.1□□□□□ -0.79
CPSF4-212ENST00000482251 LRRC8BQ6P9F7 803 aa10.1□□□□□ -0.79
CPSF4-212ENST00000482251 ZNF517Q6ZMY9 492 aaPredicted RBP10.1□□□□□ -0.79
CPSF4-212ENST00000482251 OTOAQ7RTW8 1153 aa10.1□□□□□ -0.79
CPSF4-212ENST00000482251 ZNF655Q8N720 491 aaPredicted RBP10.1□□□□□ -0.79
CPSF4-212ENST00000482251 GSDMBQ8TAX9 411 aa10.1□□□□□ -0.79
CPSF4-212ENST00000482251 UBE2Q2Q8WVN8 375 aa10.1□□□□□ -0.79
CPSF4-212ENST00000482251 ASZ1Q8WWH4 475 aa10.1□□□□□ -0.79
CPSF4-212ENST00000482251 PEX13Q92968 403 aa10.1□□□□□ -0.79
CPSF4-212ENST00000482251 MAGOHBQ96A72 148 aaKnown RBP10.1□□□□□ -0.79
CPSF4-212ENST00000482251 ZNF669Q96BR6 464 aaPredicted RBP10.1□□□□□ -0.79
CPSF4-212ENST00000482251 SGSM3Q96HU1 749 aa10.1□□□□□ -0.79
CPSF4-212ENST00000482251 MENTQ9BUN1 341 aa10.1□□□□□ -0.79
CPSF4-212ENST00000482251 KIFC1Q9BW19 673 aa10.1□□□□□ -0.79
CPSF4-212ENST00000482251 CARD6Q9BX69 1037 aa10.1□□□□□ -0.79
CPSF4-212ENST00000482251 GPR87Q9BY21 358 aa10.1□□□□□ -0.79
CPSF4-212ENST00000482251 P2RY12Q9H244 342 aa10.1□□□□□ -0.79
CPSF4-212ENST00000482251 OR6C2Q9NZP2 312 aa10.1□□□□□ -0.79
CPSF4-212ENST00000482251 DHCR7Q9UBM7 475 aaKnown RBP10.1□□□□□ -0.79
CPSF4-212ENST00000482251 SERTAD3Q9UJW9 196 aa10.1□□□□□ -0.79
CPSF4-212ENST00000482251 SOX13Q9UN79 622 aa10.1□□□□□ -0.79
CPSF4-212ENST00000482251 FARSAQ9Y285 508 aaKnown RBP10.1□□□□□ -0.79
CPSF4-212ENST00000482251 CRYL1Q9Y2S2 319 aa10.1□□□□□ -0.79
CPSF4-212ENST00000482251 PCSK5Q92824 1860 aa10.1□□□□□ -0.79
CPSF4-212ENST00000482251 C9J4A7 227 aa10.09□□□□□ -0.79
CPSF4-212ENST00000482251 ZSCAN9O15535 394 aaPredicted RBP10.09□□□□□ -0.79
CPSF4-212ENST00000482251 KDM1AO60341 852 aa10.09□□□□□ -0.79
CPSF4-212ENST00000482251 RPN2P04844 631 aa10.09□□□□□ -0.79
CPSF4-212ENST00000482251 CAPN1P07384 714 aa10.09□□□□□ -0.79
CPSF4-212ENST00000482251 MSL3P1P0C860 447 aa10.09□□□□□ -0.79
CPSF4-212ENST00000482251 CBSLP0DN79 551 aa10.09□□□□□ -0.79
CPSF4-212ENST00000482251 OTX2P32243 289 aa10.09□□□□□ -0.79
CPSF4-212ENST00000482251 CBSP35520 551 aa10.09□□□□□ -0.79
CPSF4-212ENST00000482251 GABRA4P48169 554 aa10.09□□□□□ -0.79
CPSF4-212ENST00000482251 RAPSNQ13702 412 aa10.09□□□□□ -0.79
CPSF4-212ENST00000482251 GRB7Q14451 532 aa10.09□□□□□ -0.79
CPSF4-212ENST00000482251 KIR2DS3Q14952 304 aa10.09□□□□□ -0.79
CPSF4-212ENST00000482251 NCF4Q15080 339 aa10.09□□□□□ -0.79
CPSF4-212ENST00000482251 IGFBP7Q16270 282 aa10.09□□□□□ -0.79
CPSF4-212ENST00000482251 KYNUQ16719 465 aa10.09□□□□□ -0.79
CPSF4-212ENST00000482251 MRNIPQ6NTE8 343 aa10.09□□□□□ -0.79
CPSF4-212ENST00000482251 UNC5DQ6UXZ4 953 aa10.09□□□□□ -0.79
CPSF4-212ENST00000482251 C4orf22Q6V702 233 aa10.09□□□□□ -0.79
CPSF4-212ENST00000482251 ASB18Q6ZVZ8 466 aa10.09□□□□□ -0.79
CPSF4-212ENST00000482251 SLC35F6Q8N357 371 aa10.09□□□□□ -0.79
CPSF4-212ENST00000482251 COG1Q8WTW3 980 aa10.09□□□□□ -0.79
CPSF4-212ENST00000482251 LPGAT1Q92604 370 aa10.09□□□□□ -0.79
CPSF4-212ENST00000482251 TCTN2Q96GX1 697 aa10.09□□□□□ -0.79
CPSF4-212ENST00000482251 LRFN5Q96NI6 719 aa10.09□□□□□ -0.79
CPSF4-212ENST00000482251 PANX3Q96QZ0 392 aa10.09□□□□□ -0.79
CPSF4-212ENST00000482251 NLNQ9BYT8 704 aa10.09□□□□□ -0.79
CPSF4-212ENST00000482251 MRM3Q9HC36 420 aaKnown RBP10.09□□□□□ -0.79
CPSF4-212ENST00000482251 SYTL2Q9HCH5 934 aa10.09□□□□□ -0.79
CPSF4-212ENST00000482251 ACSS2Q9NR19 701 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms