RNA–Protein interactions for RNA: ENST00000481048.5

LRCH3-216, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 536 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-216ENST00000481048 SLC10A2Q12908 348 aaPredicted RBP6.34□□□□□ -1.39
LRCH3-216ENST00000481048 NFATC2Q13469 925 aa6.34□□□□□ -1.39
LRCH3-216ENST00000481048 IHHQ14623 411 aa6.34□□□□□ -1.39
LRCH3-216ENST00000481048 PDK1Q15118 436 aa6.34□□□□□ -1.39
LRCH3-216ENST00000481048 PTPRRQ15256 657 aa6.34□□□□□ -1.39
LRCH3-216ENST00000481048 TESK1Q15569 626 aa6.34□□□□□ -1.39
LRCH3-216ENST00000481048 ATP13A4Q4VNC1 1196 aa6.34□□□□□ -1.39
LRCH3-216ENST00000481048 SPDYAQ5MJ70 313 aa6.34□□□□□ -1.39
LRCH3-216ENST00000481048 ZDHHC20Q5W0Z9 365 aa6.34□□□□□ -1.39
LRCH3-216ENST00000481048 ANKS6Q68DC2 871 aa6.34□□□□□ -1.39
LRCH3-216ENST00000481048 CCDC70Q6NSX1 233 aa6.34□□□□□ -1.39
LRCH3-216ENST00000481048 ABRAXAS1Q6UWZ7 409 aa6.34□□□□□ -1.39
LRCH3-216ENST00000481048 TMEM26Q6ZUK4 368 aa6.34□□□□□ -1.39
LRCH3-216ENST00000481048 BZW1Q7L1Q6 419 aaKnown RBP6.34□□□□□ -1.39
LRCH3-216ENST00000481048 KDELC2Q7Z4H8 507 aa6.34□□□□□ -1.39
LRCH3-216ENST00000481048 TRIM74Q86UV6 250 aa6.34□□□□□ -1.39
LRCH3-216ENST00000481048 NT5DC3Q86UY8 548 aa6.34□□□□□ -1.39
LRCH3-216ENST00000481048 TRAM1L1Q8N609 369 aa6.34□□□□□ -1.39
LRCH3-216ENST00000481048 LPCAT1Q8NF37 534 aa6.34□□□□□ -1.39
LRCH3-216ENST00000481048 BRSK1Q8TDC3 778 aa6.34□□□□□ -1.39
LRCH3-216ENST00000481048 JPH3Q8WXH2 748 aaPredicted RBP6.34□□□□□ -1.39
LRCH3-216ENST00000481048 CTNNBL1Q8WYA6 563 aaPredicted RBP6.34□□□□□ -1.39
LRCH3-216ENST00000481048 FCRL4Q96PJ5 515 aa6.34□□□□□ -1.39
LRCH3-216ENST00000481048 RNF157Q96PX1 679 aa6.34□□□□□ -1.39
LRCH3-216ENST00000481048 AGAP2Q99490 1192 aa6.34□□□□□ -1.39
LRCH3-216ENST00000481048 TIMM29Q9BSF4 260 aa6.34□□□□□ -1.39
LRCH3-216ENST00000481048 SPATA16Q9BXB7 569 aa6.34□□□□□ -1.39
LRCH3-216ENST00000481048 MAK16Q9BXY0 300 aaKnown RBP6.34□□□□□ -1.39
LRCH3-216ENST00000481048 POT1Q9NUX5 634 aa6.34□□□□□ -1.39
LRCH3-216ENST00000481048 TMEM9Q9P0T7 183 aa6.34□□□□□ -1.39
LRCH3-216ENST00000481048 ATXN10Q9UBB4 475 aa6.34□□□□□ -1.39
LRCH3-216ENST00000481048 EPHA6Q9UF33 1036 aa6.34□□□□□ -1.39
LRCH3-216ENST00000481048 KCND3Q9UK17 655 aa6.34□□□□□ -1.39
LRCH3-216ENST00000481048 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.34□□□□□ -1.39
LRCH3-216ENST00000481048 PCM1Q15154 2024 aa6.33□□□□□ -1.4
LRCH3-216ENST00000481048 SVILO95425 2214 aa6.33□□□□□ -1.4
LRCH3-216ENST00000481048 DIDO1Q9BTC0 2240 aaKnown RBP6.33□□□□□ -1.4
LRCH3-216ENST00000481048 LOC101059948A0A1B0GTJ6 334 aa6.33□□□□□ -1.4
LRCH3-216ENST00000481048 KLHL33A6NCF5 533 aa6.33□□□□□ -1.4
LRCH3-216ENST00000481048 GOLGA6L3A6NEY3 463 aa6.33□□□□□ -1.4
LRCH3-216ENST00000481048 A8MU76 341 aa6.33□□□□□ -1.4
LRCH3-216ENST00000481048 PPP1R12AO14974 1030 aaPredicted RBP6.33□□□□□ -1.4
LRCH3-216ENST00000481048 SNX2O60749 519 aa6.33□□□□□ -1.4
LRCH3-216ENST00000481048 UBXN7O94888 489 aa6.33□□□□□ -1.4
LRCH3-216ENST00000481048 CDK14O94921 469 aa6.33□□□□□ -1.4
LRCH3-216ENST00000481048 EML2O95834 649 aa6.33□□□□□ -1.4
LRCH3-216ENST00000481048 JCHAINP01591 159 aa6.33□□□□□ -1.4
LRCH3-216ENST00000481048 MT-ND3P03897 115 aa6.33□□□□□ -1.4
LRCH3-216ENST00000481048 TPM3P06753 285 aa6.33□□□□□ -1.4
LRCH3-216ENST00000481048 MMP2P08253 660 aa6.33□□□□□ -1.4
LRCH3-216ENST00000481048 ZNF7P17097 686 aaPredicted RBP6.33□□□□□ -1.4
LRCH3-216ENST00000481048 ZNF8P17098 575 aaPredicted RBP6.33□□□□□ -1.4
LRCH3-216ENST00000481048 AMD1P17707 334 aa6.33□□□□□ -1.4
LRCH3-216ENST00000481048 VCLP18206 1134 aa6.33□□□□□ -1.4
LRCH3-216ENST00000481048 CD86P42081 329 aa6.33□□□□□ -1.4
LRCH3-216ENST00000481048 GBE1Q04446 702 aa6.33□□□□□ -1.4
LRCH3-216ENST00000481048 TLE1Q04724 770 aa6.33□□□□□ -1.4
LRCH3-216ENST00000481048 CDK18Q07002 472 aa6.33□□□□□ -1.4
LRCH3-216ENST00000481048 CDC20Q12834 499 aa6.33□□□□□ -1.4
LRCH3-216ENST00000481048 SLC18A3Q16572 532 aa6.33□□□□□ -1.4
LRCH3-216ENST00000481048 ZNF569Q5MCW4 686 aa6.33□□□□□ -1.4
LRCH3-216ENST00000481048 LRRC38Q5VT99 294 aa6.33□□□□□ -1.4
LRCH3-216ENST00000481048 AGAP9Q5VTM2 703 aa6.33□□□□□ -1.4
LRCH3-216ENST00000481048 SLC9A4Q6AI14 798 aa6.33□□□□□ -1.4
LRCH3-216ENST00000481048 DENND5AQ6IQ26 1287 aa6.33□□□□□ -1.4
LRCH3-216ENST00000481048 TIPARPQ7Z3E1 657 aaKnown RBP6.33□□□□□ -1.4
LRCH3-216ENST00000481048 ADGRG6Q86SQ4 1221 aa6.33□□□□□ -1.4
LRCH3-216ENST00000481048 LRRTM4Q86VH4 590 aa6.33□□□□□ -1.4
LRCH3-216ENST00000481048 ZGRF1Q86YA3 2104 aa6.33□□□□□ -1.4
LRCH3-216ENST00000481048 RHOT2Q8IXI1 618 aa6.33□□□□□ -1.4
LRCH3-216ENST00000481048 PQLC3Q8N755 202 aa6.33□□□□□ -1.4
LRCH3-216ENST00000481048 CNTD1Q8N815 330 aa6.33□□□□□ -1.4
LRCH3-216ENST00000481048 C9orf43Q8TAL5 461 aaPredicted RBP6.33□□□□□ -1.4
LRCH3-216ENST00000481048 Q8TCH9 128 aa6.33□□□□□ -1.4
LRCH3-216ENST00000481048 GLYATL1Q969I3 302 aa6.33□□□□□ -1.4
LRCH3-216ENST00000481048 TADA1Q96BN2 335 aa6.33□□□□□ -1.4
LRCH3-216ENST00000481048 IMP4Q96G21 291 aaKnown RBP6.33□□□□□ -1.4
LRCH3-216ENST00000481048 ZDHHC12Q96GR4 267 aa6.33□□□□□ -1.4
LRCH3-216ENST00000481048 C9orf72Q96LT7 481 aa6.33□□□□□ -1.4
LRCH3-216ENST00000481048 PLEKHG4BQ96PX9 1271 aa6.33□□□□□ -1.4
LRCH3-216ENST00000481048 VPS35Q96QK1 796 aa6.33□□□□□ -1.4
LRCH3-216ENST00000481048 ANP32EQ9BTT0 268 aa6.33□□□□□ -1.4
LRCH3-216ENST00000481048 MEGF9Q9H1U4 602 aa6.33□□□□□ -1.4
LRCH3-216ENST00000481048 SLC25A51Q9H1U9 297 aa6.33□□□□□ -1.4
LRCH3-216ENST00000481048 OR2AG1Q9H205 316 aa6.33□□□□□ -1.4
LRCH3-216ENST00000481048 TRABDQ9H4I3 376 aa6.33□□□□□ -1.4
LRCH3-216ENST00000481048 ZNF768Q9H5H4 540 aaKnown RBP6.33□□□□□ -1.4
LRCH3-216ENST00000481048 SLC40A1Q9NP59 571 aa6.33□□□□□ -1.4
LRCH3-216ENST00000481048 KLC4Q9NSK0 619 aa6.33□□□□□ -1.4
LRCH3-216ENST00000481048 SEMA5BQ9P283 1151 aa6.33□□□□□ -1.4
LRCH3-216ENST00000481048 CTTNBP2NLQ9P2B4 639 aa6.33□□□□□ -1.4
LRCH3-216ENST00000481048 NENFQ9UMX5 172 aa6.33□□□□□ -1.4
LRCH3-216ENST00000481048 KCNK6Q9Y257 313 aa6.33□□□□□ -1.4
LRCH3-216ENST00000481048 TTLL3Q9Y4R7 772 aa6.33□□□□□ -1.4
LRCH3-216ENST00000481048 RPS6KL1Q9Y6S9 549 aa6.33□□□□□ -1.4
LRCH3-216ENST00000481048 USP9YO00507 2555 aaPredicted RBP6.33□□□□□ -1.4
LRCH3-216ENST00000481048 SHANK1Q9Y566 2161 aa6.33□□□□□ -1.4
LRCH3-216ENST00000481048 POLEQ07864 2286 aa6.32□□□□□ -1.4
LRCH3-216ENST00000481048 FLNCQ14315 2725 aa6.32□□□□□ -1.4
LRCH3-216ENST00000481048 NOTCH2Q04721 2471 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms