RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 SLC13A5Q86YT5 568 aaPredicted RBP14.71□□□□□ -0.05
LIMS3-203ENST00000480744 RNF10Q8N5U6 811 aaKnown RBP14.71□□□□□ -0.05
LIMS3-203ENST00000480744 ZNF655Q8N720 491 aaPredicted RBP14.71□□□□□ -0.05
LIMS3-203ENST00000480744 CCDC89Q8N998 374 aa14.71□□□□□ -0.05
LIMS3-203ENST00000480744 TMEM102Q8N9M5 508 aaPredicted RBP14.71□□□□□ -0.05
LIMS3-203ENST00000480744 PPHLN1Q8NEY8 458 aaKnown RBP14.71□□□□□ -0.05
LIMS3-203ENST00000480744 FDCSPQ8NFU4 85 aa14.71□□□□□ -0.05
LIMS3-203ENST00000480744 CFAP61Q8NHU2 1237 aa14.71□□□□□ -0.05
LIMS3-203ENST00000480744 SGSM3Q96HU1 749 aa14.71□□□□□ -0.05
LIMS3-203ENST00000480744 ZNF778Q96MU6 729 aa14.71□□□□□ -0.05
LIMS3-203ENST00000480744 RANBP9Q96S59 729 aa14.71□□□□□ -0.05
LIMS3-203ENST00000480744 NUDT9Q9BW91 350 aa14.71□□□□□ -0.05
LIMS3-203ENST00000480744 TSSK1BQ9BXA7 367 aa14.71□□□□□ -0.05
LIMS3-203ENST00000480744 MFRPQ9BY79 579 aa14.71□□□□□ -0.05
LIMS3-203ENST00000480744 FRMD8P1Q9BZ68 369 aaPredicted RBP14.71□□□□□ -0.05
LIMS3-203ENST00000480744 MLXIPLQ9NP71 852 aa14.71□□□□□ -0.05
LIMS3-203ENST00000480744 TXLNGQ9NUQ3 528 aa14.71□□□□□ -0.05
LIMS3-203ENST00000480744 DHCR7Q9UBM7 475 aaKnown RBP14.71□□□□□ -0.05
LIMS3-203ENST00000480744 ANAPC5Q9UJX4 755 aa14.71□□□□□ -0.05
LIMS3-203ENST00000480744 TCAF1Q9Y4C2 921 aa14.71□□□□□ -0.05
LIMS3-203ENST00000480744 NUP210LQ5VU65 1888 aa14.71□□□□□ -0.05
LIMS3-203ENST00000480744 CLEC18AA5D8T8 446 aa14.7□□□□□ -0.06
LIMS3-203ENST00000480744 ZSCAN9O15535 394 aaPredicted RBP14.7□□□□□ -0.06
LIMS3-203ENST00000480744 DPM1O60762 260 aa14.7□□□□□ -0.06
LIMS3-203ENST00000480744 CTSBP07858 339 aa14.7□□□□□ -0.06
LIMS3-203ENST00000480744 PEBP1P30086 187 aaKnown RBP14.7□□□□□ -0.06
LIMS3-203ENST00000480744 CCR7P32248 378 aa14.7□□□□□ -0.06
LIMS3-203ENST00000480744 PPARGP37231 505 aaPredicted RBP14.7□□□□□ -0.06
LIMS3-203ENST00000480744 FOLR3P41439 243 aa14.7□□□□□ -0.06
LIMS3-203ENST00000480744 GABRA4P48169 554 aa14.7□□□□□ -0.06
LIMS3-203ENST00000480744 SEMA3AQ14563 771 aa14.7□□□□□ -0.06
LIMS3-203ENST00000480744 KIR2DS3Q14952 304 aa14.7□□□□□ -0.06
LIMS3-203ENST00000480744 SLC5A12Q1EHB4 618 aa14.7□□□□□ -0.06
LIMS3-203ENST00000480744 DNAJC21Q5F1R6 531 aaKnown RBP14.7□□□□□ -0.06
LIMS3-203ENST00000480744 PAPD7Q5XG87 772 aaKnown RBP14.7□□□□□ -0.06
LIMS3-203ENST00000480744 ZNF385CQ66K41 422 aaPredicted RBP14.7□□□□□ -0.06
LIMS3-203ENST00000480744 CLEC18BQ6UXF7 455 aa14.7□□□□□ -0.06
LIMS3-203ENST00000480744 MED25Q71SY5 747 aa14.7□□□□□ -0.06
LIMS3-203ENST00000480744 ZNF534Q76KX8 674 aa14.7□□□□□ -0.06
LIMS3-203ENST00000480744 NLRP9Q7RTR0 991 aa14.7□□□□□ -0.06
LIMS3-203ENST00000480744 LDB1Q86U70 411 aaPredicted RBP14.7□□□□□ -0.06
LIMS3-203ENST00000480744 TAX1BP1Q86VP1 789 aa14.7□□□□□ -0.06
LIMS3-203ENST00000480744 VRK3Q8IV63 474 aa14.7□□□□□ -0.06
LIMS3-203ENST00000480744 FAM20CQ8IXL6 584 aa14.7□□□□□ -0.06
LIMS3-203ENST00000480744 C2orf73Q8N5S3 287 aaPredicted RBP14.7□□□□□ -0.06
LIMS3-203ENST00000480744 LMNTD1Q8N9Z9 388 aa14.7□□□□□ -0.06
LIMS3-203ENST00000480744 CLEC18CQ8NCF0 446 aa14.7□□□□□ -0.06
LIMS3-203ENST00000480744 FLVCR1-AS1Q8TAF5 88 aa14.7□□□□□ -0.06
LIMS3-203ENST00000480744 LKAAEAR1Q8TD35 194 aa14.7□□□□□ -0.06
LIMS3-203ENST00000480744 C17orf62Q9BQA9 187 aa14.7□□□□□ -0.06
LIMS3-203ENST00000480744 DHRS4Q9BTZ2 278 aa14.7□□□□□ -0.06
LIMS3-203ENST00000480744 CASS4Q9NQ75 786 aa14.7□□□□□ -0.06
LIMS3-203ENST00000480744 GPR83Q9NYM4 423 aa14.7□□□□□ -0.06
LIMS3-203ENST00000480744 MAP10Q9P2G4 905 aa14.7□□□□□ -0.06
LIMS3-203ENST00000480744 IFT80Q9P2H3 777 aaPredicted RBP14.7□□□□□ -0.06
LIMS3-203ENST00000480744 NDOR1Q9UHB4 597 aa14.7□□□□□ -0.06
LIMS3-203ENST00000480744 RIMKLBQ9ULI2 386 aa14.7□□□□□ -0.06
LIMS3-203ENST00000480744 KLHL20Q9Y2M5 609 aa14.7□□□□□ -0.06
LIMS3-203ENST00000480744 PTRH2Q9Y3E5 179 aaKnown RBP14.7□□□□□ -0.06
LIMS3-203ENST00000480744 IQCF5A8MTL0 148 aa14.69□□□□□ -0.06
LIMS3-203ENST00000480744 CEACAM4O75871 244 aa14.69□□□□□ -0.06
LIMS3-203ENST00000480744 APOA4P06727 396 aa14.69□□□□□ -0.06
LIMS3-203ENST00000480744 MAGP20916 626 aa14.69□□□□□ -0.06
LIMS3-203ENST00000480744 GNLYP22749 145 aa14.69□□□□□ -0.06
LIMS3-203ENST00000480744 PKLRP30613 574 aa14.69□□□□□ -0.06
LIMS3-203ENST00000480744 RAB28P51157 221 aa14.69□□□□□ -0.06
LIMS3-203ENST00000480744 DCDP81605 110 aaKnown RBP14.69□□□□□ -0.06
LIMS3-203ENST00000480744 ACVR1Q04771 509 aa14.69□□□□□ -0.06
LIMS3-203ENST00000480744 TMED2Q15363 201 aa14.69□□□□□ -0.06
LIMS3-203ENST00000480744 AARS2Q5JTZ9 985 aaKnown RBP14.69□□□□□ -0.06
LIMS3-203ENST00000480744 RHBDD2Q6NTF9 364 aa14.69□□□□□ -0.06
LIMS3-203ENST00000480744 MRGPREQ86SM8 312 aa14.69□□□□□ -0.06
LIMS3-203ENST00000480744 SLC22A15Q8IZD6 547 aa14.69□□□□□ -0.06
LIMS3-203ENST00000480744 KRT222Q8N1A0 295 aa14.69□□□□□ -0.06
LIMS3-203ENST00000480744 GLIS1Q8NBF1 620 aa14.69□□□□□ -0.06
LIMS3-203ENST00000480744 NDC1Q9BTX1 674 aa14.69□□□□□ -0.06
LIMS3-203ENST00000480744 AP1M1Q9BXS5 423 aa14.69□□□□□ -0.06
LIMS3-203ENST00000480744 TSGA10Q9BZW7 698 aa14.69□□□□□ -0.06
LIMS3-203ENST00000480744 SLAMF7Q9NQ25 335 aa14.69□□□□□ -0.06
LIMS3-203ENST00000480744 CATSPERZQ9NTU4 200 aa14.69□□□□□ -0.06
LIMS3-203ENST00000480744 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.69□□□□□ -0.06
LIMS3-203ENST00000480744 PAK5Q9P286 719 aa14.69□□□□□ -0.06
LIMS3-203ENST00000480744 SRPK3Q9UPE1 567 aa14.69□□□□□ -0.06
LIMS3-203ENST00000480744 PLCL2Q9UPR0 1127 aa14.69□□□□□ -0.06
LIMS3-203ENST00000480744 CDYLQ9Y232 598 aa14.69□□□□□ -0.06
LIMS3-203ENST00000480744 PCDHGB7Q9Y5F8 929 aa14.69□□□□□ -0.06
LIMS3-203ENST00000480744 ESPL1Q14674 2120 aa14.69□□□□□ -0.06
LIMS3-203ENST00000480744 BLACEA4D250 179 aa14.68□□□□□ -0.06
LIMS3-203ENST00000480744 GOLGA6L6A8MZA4 724 aa14.68□□□□□ -0.06
LIMS3-203ENST00000480744 H3BMH7 237 aa14.68□□□□□ -0.06
LIMS3-203ENST00000480744 PEX12O00623 359 aa14.68□□□□□ -0.06
LIMS3-203ENST00000480744 KRT86O43790 486 aa14.68□□□□□ -0.06
LIMS3-203ENST00000480744 KLF7O75840 302 aaPredicted RBP14.68□□□□□ -0.06
LIMS3-203ENST00000480744 RPN2P04844 631 aa14.68□□□□□ -0.06
LIMS3-203ENST00000480744 ZSCAN5DPP0CG00 497 aa14.68□□□□□ -0.06
LIMS3-203ENST00000480744 SESN2P58004 480 aaPredicted RBP14.68□□□□□ -0.06
LIMS3-203ENST00000480744 FOXL2P58012 376 aa14.68□□□□□ -0.06
LIMS3-203ENST00000480744 RPS6KA1Q15418 735 aa14.68□□□□□ -0.06
LIMS3-203ENST00000480744 PRR30Q53SZ7 412 aaPredicted RBP14.68□□□□□ -0.06
LIMS3-203ENST00000480744 PTRHD1Q6GMV3 140 aaKnown RBP14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms