RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 OR51E2Q9H255 320 aa10.43□□□□□ -0.74
SIK3-210ENST00000480468 SEMA4BQ9NPR2 832 aaPredicted RBP10.43□□□□□ -0.74
SIK3-210ENST00000480468 TRMT6Q9UJA5 497 aaKnown RBP10.43□□□□□ -0.74
SIK3-210ENST00000480468 AUP1Q9Y679 476 aa10.43□□□□□ -0.74
SIK3-210ENST00000480468 U3KQV3 271 aa10.43□□□□□ -0.74
SIK3-210ENST00000480468 COL11A1P12107 1806 aaPredicted RBP10.43□□□□□ -0.74
SIK3-210ENST00000480468 PCM1Q15154 2024 aa10.43□□□□□ -0.74
SIK3-210ENST00000480468 TRIM77I1YAP6 450 aa10.42□□□□□ -0.74
SIK3-210ENST00000480468 TLL1O43897 1013 aa10.42□□□□□ -0.74
SIK3-210ENST00000480468 DNTTP04053 509 aa10.42□□□□□ -0.74
SIK3-210ENST00000480468 DDX5P17844 614 aaKnown RBP10.42□□□□□ -0.74
SIK3-210ENST00000480468 MYL9P24844 172 aa10.42□□□□□ -0.74
SIK3-210ENST00000480468 DNAJA1P31689 397 aaKnown RBP10.42□□□□□ -0.74
SIK3-210ENST00000480468 TIAL1Q01085 375 aaKnown RBP eCLIP10.42□□□□□ -0.74
SIK3-210ENST00000480468 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.42□□□□□ -0.74
SIK3-210ENST00000480468 SCN1BQ07699 218 aa10.42□□□□□ -0.74
SIK3-210ENST00000480468 HYAL2Q12891 473 aa10.42□□□□□ -0.74
SIK3-210ENST00000480468 PM20D1Q6GTS8 502 aa10.42□□□□□ -0.74
SIK3-210ENST00000480468 OR2T5Q6IEZ7 315 aa10.42□□□□□ -0.74
SIK3-210ENST00000480468 PLPPR4Q7Z2D5 763 aa10.42□□□□□ -0.74
SIK3-210ENST00000480468 KCTD20Q7Z5Y7 419 aa10.42□□□□□ -0.74
SIK3-210ENST00000480468 CALHM3Q86XJ0 350 aa10.42□□□□□ -0.74
SIK3-210ENST00000480468 PLPP6Q8IY26 295 aa10.42□□□□□ -0.74
SIK3-210ENST00000480468 CYP4Z2PQ8N1L4 340 aa10.42□□□□□ -0.74
SIK3-210ENST00000480468 FAM181AQ8N9Y4 354 aa10.42□□□□□ -0.74
SIK3-210ENST00000480468 OR2T29Q8NH02 315 aa10.42□□□□□ -0.74
SIK3-210ENST00000480468 ZNF675Q8TD23 568 aa10.42□□□□□ -0.74
SIK3-210ENST00000480468 PPP1R13LQ8WUF5 828 aa10.42□□□□□ -0.74
SIK3-210ENST00000480468 SLC13A3Q8WWT9 602 aa10.42□□□□□ -0.74
SIK3-210ENST00000480468 COL21A1Q96P44 957 aa10.42□□□□□ -0.74
SIK3-210ENST00000480468 MCCC1Q96RQ3 725 aaPredicted RBP10.42□□□□□ -0.74
SIK3-210ENST00000480468 GTPBP2Q9BX10 602 aaKnown RBP10.42□□□□□ -0.74
SIK3-210ENST00000480468 C1QTNF7Q9BXJ2 289 aa10.42□□□□□ -0.74
SIK3-210ENST00000480468 DUSP16Q9BY84 665 aa10.42□□□□□ -0.74
SIK3-210ENST00000480468 SMURF1Q9HCE7 757 aa10.42□□□□□ -0.74
SIK3-210ENST00000480468 ATP13A1Q9HD20 1204 aa10.42□□□□□ -0.74
SIK3-210ENST00000480468 OLA1Q9NTK5 396 aaKnown RBP10.42□□□□□ -0.74
SIK3-210ENST00000480468 WDR70Q9NW82 654 aa10.42□□□□□ -0.74
SIK3-210ENST00000480468 ABI2Q9NYB9 513 aaPredicted RBP10.42□□□□□ -0.74
SIK3-210ENST00000480468 KLHL20Q9Y2M5 609 aa10.42□□□□□ -0.74
SIK3-210ENST00000480468 V9GYH0 126 aa10.42□□□□□ -0.74
SIK3-210ENST00000480468 RLFQ13129 1914 aa10.42□□□□□ -0.74
SIK3-210ENST00000480468 PLXNA1Q9UIW2 1896 aa10.42□□□□□ -0.74
SIK3-210ENST00000480468 LINC00862A6NCI5 91 aa10.42□□□□□ -0.74
SIK3-210ENST00000480468 OR6C70A6NIJ9 312 aa10.42□□□□□ -0.74
SIK3-210ENST00000480468 MATN3O15232 486 aa10.42□□□□□ -0.74
SIK3-210ENST00000480468 KLK8O60259 260 aa10.42□□□□□ -0.74
SIK3-210ENST00000480468 PMPCBO75439 489 aa10.42□□□□□ -0.74
SIK3-210ENST00000480468 SERPINA1P01009 418 aa10.42□□□□□ -0.74
SIK3-210ENST00000480468 CAPN1P07384 714 aa10.42□□□□□ -0.74
SIK3-210ENST00000480468 GJB1P08034 283 aa10.42□□□□□ -0.74
SIK3-210ENST00000480468 MSL3P1P0C860 447 aa10.42□□□□□ -0.74
SIK3-210ENST00000480468 AKT1P31749 480 aa10.42□□□□□ -0.74
SIK3-210ENST00000480468 SLC9A3P48764 834 aa10.42□□□□□ -0.74
SIK3-210ENST00000480468 GMPSP49915 693 aaPredicted RBP10.42□□□□□ -0.74
SIK3-210ENST00000480468 CREMQ03060 361 aa10.42□□□□□ -0.74
SIK3-210ENST00000480468 IRF3Q14653 427 aa10.42□□□□□ -0.74
SIK3-210ENST00000480468 RUNDC3AQ59EK9 446 aa10.42□□□□□ -0.74
SIK3-210ENST00000480468 CARD16Q5EG05 197 aa10.42□□□□□ -0.74
SIK3-210ENST00000480468 Q6ZSR9 355 aa10.42□□□□□ -0.74
SIK3-210ENST00000480468 CEP68Q76N32 757 aa10.42□□□□□ -0.74
SIK3-210ENST00000480468 KRT73Q86Y46 540 aa10.42□□□□□ -0.74
SIK3-210ENST00000480468 P3H2Q8IVL5 708 aa10.42□□□□□ -0.74
SIK3-210ENST00000480468 ZDHHC21Q8IVQ6 265 aa10.42□□□□□ -0.74
SIK3-210ENST00000480468 ENTHD1Q8IYW4 607 aa10.42□□□□□ -0.74
SIK3-210ENST00000480468 RYBPQ8N488 228 aaPredicted RBP10.42□□□□□ -0.74
SIK3-210ENST00000480468 ATPAF2Q8N5M1 289 aa10.42□□□□□ -0.74
SIK3-210ENST00000480468 OR4M1Q8NGD0 313 aa10.42□□□□□ -0.74
SIK3-210ENST00000480468 OR56A4Q8NGH8 313 aa10.42□□□□□ -0.74
SIK3-210ENST00000480468 DNAJB8Q8NHS0 232 aa10.42□□□□□ -0.74
SIK3-210ENST00000480468 TMEM80Q96HE8 168 aa10.42□□□□□ -0.74
SIK3-210ENST00000480468 ZNF419Q96HQ0 510 aaPredicted RBP10.42□□□□□ -0.74
SIK3-210ENST00000480468 HRASLS5Q96KN8 279 aa10.42□□□□□ -0.74
SIK3-210ENST00000480468 FRMD6Q96NE9 622 aa10.42□□□□□ -0.74
SIK3-210ENST00000480468 C17orf62Q9BQA9 187 aa10.42□□□□□ -0.74
SIK3-210ENST00000480468 ACAT2Q9BWD1 397 aa10.42□□□□□ -0.74
SIK3-210ENST00000480468 DERL2Q9GZP9 239 aa10.42□□□□□ -0.74
SIK3-210ENST00000480468 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.42□□□□□ -0.74
SIK3-210ENST00000480468 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.42□□□□□ -0.74
SIK3-210ENST00000480468 OR12D3Q9UGF7 316 aa10.42□□□□□ -0.74
SIK3-210ENST00000480468 STOML2Q9UJZ1 356 aa10.42□□□□□ -0.74
SIK3-210ENST00000480468 ZNF225Q9UK10 706 aa10.42□□□□□ -0.74
SIK3-210ENST00000480468 ZSWIM8A7E2V4 1837 aa10.42□□□□□ -0.74
SIK3-210ENST00000480468 MROH6A6NGR9 719 aa10.41□□□□□ -0.74
SIK3-210ENST00000480468 CLCA1A8K7I4 914 aa10.41□□□□□ -0.74
SIK3-210ENST00000480468 SUPT3HB4E1H0 165 aa10.41□□□□□ -0.74
SIK3-210ENST00000480468 ARHGEF15O94989 841 aa10.41□□□□□ -0.74
SIK3-210ENST00000480468 EGFRP00533 1210 aa10.41□□□□□ -0.74
SIK3-210ENST00000480468 TGFB3P10600 412 aa10.41□□□□□ -0.74
SIK3-210ENST00000480468 UQCRC1P31930 480 aa10.41□□□□□ -0.74
SIK3-210ENST00000480468 CSTF2P33240 577 aaKnown RBP eCLIP10.41□□□□□ -0.74
SIK3-210ENST00000480468 DGKQP52824 942 aa10.41□□□□□ -0.74
SIK3-210ENST00000480468 RPP38P78345 283 aaKnown RBP10.41□□□□□ -0.74
SIK3-210ENST00000480468 NPRL3Q12980 569 aa10.41□□□□□ -0.74
SIK3-210ENST00000480468 EIF4HQ15056 248 aaKnown RBP10.41□□□□□ -0.74
SIK3-210ENST00000480468 IL31Q6EBC2 164 aa10.41□□□□□ -0.74
SIK3-210ENST00000480468 FAHD1Q6P587 224 aa10.41□□□□□ -0.74
SIK3-210ENST00000480468 KDELC1Q6UW63 502 aa10.41□□□□□ -0.74
SIK3-210ENST00000480468 GPRIN3Q6ZVF9 776 aa10.41□□□□□ -0.74
SIK3-210ENST00000480468 ZNF367Q7RTV3 350 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms