RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 BCO2Q9BYV7 579 aa6.04□□□□□ -1.44
PRPF4B-205ENST00000480058 PCDHB16Q9NRJ7 776 aa6.04□□□□□ -1.44
PRPF4B-205ENST00000480058 PIH1D1Q9NWS0 290 aaKnown RBP6.04□□□□□ -1.44
PRPF4B-205ENST00000480058 OGDHLQ9ULD0 1010 aa6.04□□□□□ -1.44
PRPF4B-205ENST00000480058 ERVW-1Q9UQF0 538 aa6.04□□□□□ -1.44
PRPF4B-205ENST00000480058 GOLGA4Q13439 2230 aaKnown RBP6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 PRAMEF33A0A0G2JMD5 474 aa6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 NOBOXO60393 691 aa6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 PRAMEF10O60809 474 aa6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 MT-ND2P03891 347 aa6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 H1F0P07305 194 aaKnown RBP6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 CTPS1P17812 591 aa6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 KHKP50053 298 aa6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 MRPS10P82664 201 aaKnown RBP6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 GSTM4Q03013 218 aa6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 PLA2G4EQ3MJ16 856 aa6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 CDCA2Q69YH5 1023 aaPredicted RBP6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 ADGRG2Q8IZP9 1017 aa6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 TOMM5Q8N4H5 51 aa6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 EXOC2Q96KP1 924 aa6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 AARSD1Q9BTE6 412 aaKnown RBP6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 MND1Q9BWT6 205 aa6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 VPS29Q9UBQ0 182 aa6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 A0A1B0GVI7 797 aa6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 SCAMP3O14828 347 aaKnown RBP6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 GRM6O15303 877 aa6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 SLC19A2O60779 497 aa6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 TGM6O95932 706 aa6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 LINGO3P0C6S8 592 aa6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 IVDP26440 423 aa6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 GBX2P52951 348 aaPredicted RBP6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 MAPK12P53778 367 aa6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 STXBP1P61764 594 aaKnown RBP6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 IRAK1BP1Q5VVH5 260 aa6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 HACD4Q5VWC8 232 aa6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 RNF19BQ6ZMZ0 732 aa6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 OR4C6Q8NH72 309 aa6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 CXorf40AQ8TE69 158 aa6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 TMEM174Q8WUU8 243 aa6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 ISOC1Q96CN7 298 aa6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 ZC3H10Q96K80 434 aaKnown RBP6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 OR52B2Q96RD2 323 aa6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 C7orf50Q9BRJ6 194 aaKnown RBP6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 GON7Q9BXV9 100 aa6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 SLC32A1Q9H598 525 aa6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 APOBEC3GQ9HC16 384 aaKnown RBP6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 FZD10Q9ULW2 581 aa6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 TIMM13Q9Y5L4 95 aaPredicted RBP6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 PLOD2O00469 737 aa6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 TLX3O43711 291 aaPredicted RBP6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 DNAJB6O75190 326 aa6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 BANF1O75531 89 aa6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 RETP07949 1114 aa6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 CKBP12277 381 aa6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 MATN1P21941 496 aa6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 HRH2P25021 359 aa6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 ADORA2AP29274 412 aa6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 RFX3P48380 749 aa6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 HNRNPFP52597 415 aaKnown RBP6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 ADAM15Q13444 863 aa6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 GPAT3Q53EU6 434 aa6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 FAM182BQ5T319 152 aa6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 MOAP1Q96BY2 351 aa6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 BIRC7Q96CA5 298 aa6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 CHFRQ96EP1 664 aa6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 CPNE2Q96FN4 548 aaPredicted RBP6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 COMMD4Q9H0A8 199 aa6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 SGK2Q9HBY8 427 aa6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 MCUBQ9NWR8 336 aa6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 PHF24Q9UPV7 400 aa6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 U3KQV3 271 aa6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 PXDNQ92626 1479 aa6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 NOTOA8MTQ0 251 aa6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 L7N2F9 121 aa6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 WRBO00258 174 aa6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 CACNB4O00305 520 aaPredicted RBP6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 CLDN4O14493 209 aa6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 TSPAN3O60637 253 aa6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 RASAL1O95294 804 aa6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 CST3P01034 146 aaPredicted RBP6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 C2orf80Q0P641 193 aa6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 KCTD19Q17RG1 926 aaPredicted RBP6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 ZCCHC12Q6PEW1 402 aa6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 SLC24A5Q71RS6 500 aa6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 RAVER1Q8IY67 606 aaKnown RBP6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 C1orf216Q8TAB5 229 aa6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 DNAJA4Q8WW22 397 aaPredicted RBP6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 OR8D1Q8WZ84 308 aa6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 PKP2Q99959 881 aa6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 CST11Q9H112 138 aa6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 UNKLQ9H9P5 680 aaKnown RBP6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 NKX1-2Q9UD57 310 aaPredicted RBP6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 HCN2Q9UL51 889 aa6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 SPIN1Q9Y657 262 aaPredicted RBP6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 FFAR2O15552 330 aa6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 KCNE1P15382 129 aa6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 ZNF182P17025 639 aaPredicted RBP6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 STC1P52823 247 aa6.03□□□□□ -1.44
PRPF4B-205ENST00000480058 PRKAG1P54619 331 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms