RNA–Protein interactions for RNA: ENST00000479707.1

AGRN-208, Transcript of agrin, humanhuman

TSL 3

Gene AGRN, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-208ENST00000479707 SLC26A11Q86WA9 606 aa18.27■□□□□ 0.52
AGRN-208ENST00000479707 ZC3HC1Q86WB0 502 aaKnown RBP18.27■□□□□ 0.52
AGRN-208ENST00000479707 CTAGE3PQ8IX95 158 aa18.27■□□□□ 0.52
AGRN-208ENST00000479707 BMPERQ8N8U9 685 aa18.27■□□□□ 0.52
AGRN-208ENST00000479707 FAM45AQ8TCE6 357 aa18.27■□□□□ 0.52
AGRN-208ENST00000479707 FBF1Q8TES7 1133 aa18.27■□□□□ 0.52
AGRN-208ENST00000479707 UBXN4Q92575 508 aa18.27■□□□□ 0.52
AGRN-208ENST00000479707 CD180Q99467 661 aa18.27■□□□□ 0.52
AGRN-208ENST00000479707 OLFM1Q99784 485 aa18.27■□□□□ 0.52
AGRN-208ENST00000479707 NSMCE4AQ9NXX6 385 aa18.27■□□□□ 0.52
AGRN-208ENST00000479707 B3GALT1Q9Y5Z6 326 aa18.27■□□□□ 0.52
AGRN-208ENST00000479707 FAM95CA0A1B0GW59 222 aa18.26■□□□□ 0.51
AGRN-208ENST00000479707 FAM159BA6NKW6 160 aa18.26■□□□□ 0.51
AGRN-208ENST00000479707 SRRM3A6NNA2 597 aaPredicted RBP18.26■□□□□ 0.51
AGRN-208ENST00000479707 ARHGEF33A8MVX0 844 aa18.26■□□□□ 0.51
AGRN-208ENST00000479707 B4E171 279 aa18.26■□□□□ 0.51
AGRN-208ENST00000479707 MATN2O00339 956 aa18.26■□□□□ 0.51
AGRN-208ENST00000479707 RASGRF2O14827 1237 aa18.26■□□□□ 0.51
AGRN-208ENST00000479707 NVLO15381 856 aaKnown RBP18.26■□□□□ 0.51
AGRN-208ENST00000479707 PSIP1O75475 530 aaKnown RBP18.26■□□□□ 0.51
AGRN-208ENST00000479707 MPC1LP0DKB6 136 aa18.26■□□□□ 0.51
AGRN-208ENST00000479707 PVRP15151 417 aa18.26■□□□□ 0.51
AGRN-208ENST00000479707 UGT2B7P16662 529 aa18.26■□□□□ 0.51
AGRN-208ENST00000479707 NELFEP18615 380 aaKnown RBP18.26■□□□□ 0.51
AGRN-208ENST00000479707 CD9P21926 228 aa18.26■□□□□ 0.51
AGRN-208ENST00000479707 CCNFP41002 786 aa18.26■□□□□ 0.51
AGRN-208ENST00000479707 TSPAN7P41732 249 aa18.26■□□□□ 0.51
AGRN-208ENST00000479707 SKIV2L2P42285 1042 aaKnown RBP18.26■□□□□ 0.51
AGRN-208ENST00000479707 MLLT3P42568 568 aaPredicted RBP18.26■□□□□ 0.51
AGRN-208ENST00000479707 RAB28P51157 221 aa18.26■□□□□ 0.51
AGRN-208ENST00000479707 PCBP4P57723 403 aaKnown RBP18.26■□□□□ 0.51
AGRN-208ENST00000479707 DCAF12Q5T6F0 453 aa18.26■□□□□ 0.51
AGRN-208ENST00000479707 NEK10Q6ZWH5 1172 aa18.26■□□□□ 0.51
AGRN-208ENST00000479707 TRIM73Q86UV7 250 aa18.26■□□□□ 0.51
AGRN-208ENST00000479707 LINC01555Q8NAE3 123 aa18.26■□□□□ 0.51
AGRN-208ENST00000479707 MAGEC3Q8TD91 643 aa18.26■□□□□ 0.51
AGRN-208ENST00000479707 OR6C1Q96RD1 312 aa18.26■□□□□ 0.51
AGRN-208ENST00000479707 MENTQ9BUN1 341 aa18.26■□□□□ 0.51
AGRN-208ENST00000479707 L2HGDHQ9H9P8 463 aa18.26■□□□□ 0.51
AGRN-208ENST00000479707 SOHLH2Q9NX45 425 aa18.26■□□□□ 0.51
AGRN-208ENST00000479707 OR6C2Q9NZP2 312 aa18.26■□□□□ 0.51
AGRN-208ENST00000479707 SEMA5BQ9P283 1151 aa18.26■□□□□ 0.51
AGRN-208ENST00000479707 CORO1CQ9ULV4 474 aaPredicted RBP18.26■□□□□ 0.51
AGRN-208ENST00000479707 PCDHGA7Q9Y5G6 932 aa18.26■□□□□ 0.51
AGRN-208ENST00000479707 ADAMTS20P59510 1910 aa18.25■□□□□ 0.51
AGRN-208ENST00000479707 URB1O60287 2271 aaKnown RBP18.25■□□□□ 0.51
AGRN-208ENST00000479707 POLR1CO15160 346 aaPredicted RBP18.25■□□□□ 0.51
AGRN-208ENST00000479707 ZNF500O60304 480 aaPredicted RBP18.25■□□□□ 0.51
AGRN-208ENST00000479707 SYF2O95926 243 aaKnown RBP18.25■□□□□ 0.51
AGRN-208ENST00000479707 CATP04040 527 aaKnown RBP18.25■□□□□ 0.51
AGRN-208ENST00000479707 EBLN1P0CF75 366 aa18.25■□□□□ 0.51
AGRN-208ENST00000479707 CBSLP0DN79 551 aa18.25■□□□□ 0.51
AGRN-208ENST00000479707 ENO3P13929 434 aaPredicted RBP18.25■□□□□ 0.51
AGRN-208ENST00000479707 FOLR1P15328 257 aa18.25■□□□□ 0.51
AGRN-208ENST00000479707 ST6GAL1P15907 406 aa18.25■□□□□ 0.51
AGRN-208ENST00000479707 FDXRP22570 491 aa18.25■□□□□ 0.51
AGRN-208ENST00000479707 ECHS1P30084 290 aa18.25■□□□□ 0.51
AGRN-208ENST00000479707 PEBP1P30086 187 aaKnown RBP18.25■□□□□ 0.51
AGRN-208ENST00000479707 CBSP35520 551 aa18.25■□□□□ 0.51
AGRN-208ENST00000479707 EIF2S3P41091 472 aaKnown RBP18.25■□□□□ 0.51
AGRN-208ENST00000479707 KBTBD12Q3ZCT8 623 aa18.25■□□□□ 0.51
AGRN-208ENST00000479707 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.25■□□□□ 0.51
AGRN-208ENST00000479707 UBAP2Q5T6F2 1119 aaKnown RBP18.25■□□□□ 0.51
AGRN-208ENST00000479707 SPESP1Q6UW49 350 aa18.25■□□□□ 0.51
AGRN-208ENST00000479707 CYS1Q717R9 158 aa18.25■□□□□ 0.51
AGRN-208ENST00000479707 ZFAND4Q86XD8 727 aa18.25■□□□□ 0.51
AGRN-208ENST00000479707 FAM20CQ8IXL6 584 aa18.25■□□□□ 0.51
AGRN-208ENST00000479707 IFT20Q8IY31 132 aa18.25■□□□□ 0.51
AGRN-208ENST00000479707 PPM1NQ8N819 430 aa18.25■□□□□ 0.51
AGRN-208ENST00000479707 SNIP1Q8TAD8 396 aaKnown RBP18.25■□□□□ 0.51
AGRN-208ENST00000479707 LINGO1Q96FE5 620 aa18.25■□□□□ 0.51
AGRN-208ENST00000479707 SLC41A2Q96JW4 573 aa18.25■□□□□ 0.51
AGRN-208ENST00000479707 OR2A14Q96R47 310 aa18.25■□□□□ 0.51
AGRN-208ENST00000479707 FMO2Q99518 471 aa18.25■□□□□ 0.51
AGRN-208ENST00000479707 FAM129AQ9BZQ8 928 aa18.25■□□□□ 0.51
AGRN-208ENST00000479707 FBXO8Q9NRD0 319 aa18.25■□□□□ 0.51
AGRN-208ENST00000479707 C1GALT1Q9NS00 363 aa18.25■□□□□ 0.51
AGRN-208ENST00000479707 SIDT1Q9NXL6 827 aaKnown RBP18.25■□□□□ 0.51
AGRN-208ENST00000479707 NINJ2Q9NZG7 142 aa18.25■□□□□ 0.51
AGRN-208ENST00000479707 TXNDC16Q9P2K2 825 aa18.25■□□□□ 0.51
AGRN-208ENST00000479707 NFU1Q9UMS0 254 aa18.25■□□□□ 0.51
AGRN-208ENST00000479707 MTO1Q9Y2Z2 717 aaKnown RBP18.25■□□□□ 0.51
AGRN-208ENST00000479707 APC2O95996 2303 aa18.24■□□□□ 0.51
AGRN-208ENST00000479707 ZBTB14O43829 449 aa18.24■□□□□ 0.51
AGRN-208ENST00000479707 SNRNP200O75643 2136 aaKnown RBP18.24■□□□□ 0.51
AGRN-208ENST00000479707 FAM155BO75949 473 aa18.24■□□□□ 0.51
AGRN-208ENST00000479707 ZBTB11O95625 1053 aaPredicted RBP18.24■□□□□ 0.51
AGRN-208ENST00000479707 C1QAP02745 245 aa18.24■□□□□ 0.51
AGRN-208ENST00000479707 MAP4P27816 1152 aaKnown RBP18.24■□□□□ 0.51
AGRN-208ENST00000479707 STX2P32856 288 aa18.24■□□□□ 0.51
AGRN-208ENST00000479707 RGS4P49798 205 aa18.24■□□□□ 0.51
AGRN-208ENST00000479707 RAB15P59190 212 aa18.24■□□□□ 0.51
AGRN-208ENST00000479707 HSD11B2P80365 405 aa18.24■□□□□ 0.51
AGRN-208ENST00000479707 ZNF460Q14592 562 aa18.24■□□□□ 0.51
AGRN-208ENST00000479707 EFTUD2Q15029 972 aaKnown RBP eCLIP18.24■□□□□ 0.512e-15■■■■■ 30.5
AGRN-208ENST00000479707 TEX35Q5T0J7 233 aa18.24■□□□□ 0.51
AGRN-208ENST00000479707 CEACAM20Q6UY09 585 aa18.24■□□□□ 0.51
AGRN-208ENST00000479707 UBE2R2Q712K3 238 aaPredicted RBP18.24■□□□□ 0.51
AGRN-208ENST00000479707 RAB42Q8N4Z0 105 aa18.24■□□□□ 0.51
AGRN-208ENST00000479707 ZNF248Q8NDW4 579 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms