RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 MTX2O75431 263 aa8.67□□□□□ -1.02
DDX56-211ENST00000479602 PSIP1O75475 530 aaKnown RBP8.67□□□□□ -1.02
DDX56-211ENST00000479602 HAUS5O94927 633 aa8.67□□□□□ -1.02
DDX56-211ENST00000479602 WISP1O95388 367 aa8.67□□□□□ -1.02
DDX56-211ENST00000479602 CPNE6O95741 557 aa8.67□□□□□ -1.02
DDX56-211ENST00000479602 TSPAN12O95859 305 aa8.67□□□□□ -1.02
DDX56-211ENST00000479602 SLC35G4P0C7Q5 338 aa8.67□□□□□ -1.02
DDX56-211ENST00000479602 FGF3P11487 239 aaPredicted RBP8.67□□□□□ -1.02
DDX56-211ENST00000479602 COL6A2P12110 1019 aa8.67□□□□□ -1.02
DDX56-211ENST00000479602 ACP5P13686 325 aa8.67□□□□□ -1.02
DDX56-211ENST00000479602 H2AFXP16104 143 aaPredicted RBP8.67□□□□□ -1.02
DDX56-211ENST00000479602 CRABP2P29373 138 aa8.67□□□□□ -1.02
DDX56-211ENST00000479602 CCR7P32248 378 aa8.67□□□□□ -1.02
DDX56-211ENST00000479602 HALP42357 657 aa8.67□□□□□ -1.02
DDX56-211ENST00000479602 OR1D5P58170 312 aa8.67□□□□□ -1.02
DDX56-211ENST00000479602 GPLD1P80108 840 aa8.67□□□□□ -1.02
DDX56-211ENST00000479602 CDKL1Q00532 357 aa8.67□□□□□ -1.02
DDX56-211ENST00000479602 BOP1Q14137 746 aaKnown RBP8.67□□□□□ -1.02
DDX56-211ENST00000479602 ARHGAP19Q14CB8 494 aa8.67□□□□□ -1.02
DDX56-211ENST00000479602 TBR1Q16650 682 aa8.67□□□□□ -1.02
DDX56-211ENST00000479602 ZNF789Q5FWF6 425 aa8.67□□□□□ -1.02
DDX56-211ENST00000479602 PTRHD1Q6GMV3 140 aaKnown RBP8.67□□□□□ -1.02
DDX56-211ENST00000479602 METTL2BQ6P1Q9 378 aaKnown RBP8.67□□□□□ -1.02
DDX56-211ENST00000479602 FOXR1Q6PIV2 292 aa8.67□□□□□ -1.02
DDX56-211ENST00000479602 CNSTQ6PJW8 725 aa8.67□□□□□ -1.02
DDX56-211ENST00000479602 OTOAQ7RTW8 1153 aa8.67□□□□□ -1.02
DDX56-211ENST00000479602 STRA8Q7Z7C7 330 aa8.67□□□□□ -1.02
DDX56-211ENST00000479602 ZFAND4Q86XD8 727 aa8.67□□□□□ -1.02
DDX56-211ENST00000479602 TBC1D21Q8IYX1 336 aa8.67□□□□□ -1.02
DDX56-211ENST00000479602 NKAPQ8N5F7 415 aaKnown RBP8.67□□□□□ -1.02
DDX56-211ENST00000479602 ZBTB2Q8N680 514 aa8.67□□□□□ -1.02
DDX56-211ENST00000479602 Q8N9G6 341 aaPredicted RBP8.67□□□□□ -1.02
DDX56-211ENST00000479602 OR5K2Q8NHB8 316 aa8.67□□□□□ -1.02
DDX56-211ENST00000479602 MAGEC3Q8TD91 643 aa8.67□□□□□ -1.02
DDX56-211ENST00000479602 DCAKDQ8WVC6 231 aa8.67□□□□□ -1.02
DDX56-211ENST00000479602 CABS1Q96KC9 395 aa8.67□□□□□ -1.02
DDX56-211ENST00000479602 PAFAH2Q99487 392 aa8.67□□□□□ -1.02
DDX56-211ENST00000479602 CMKLR1Q99788 373 aa8.67□□□□□ -1.02
DDX56-211ENST00000479602 RAB11FIP5Q9BXF6 653 aa8.67□□□□□ -1.02
DDX56-211ENST00000479602 CHRNA10Q9GZZ6 450 aa8.67□□□□□ -1.02
DDX56-211ENST00000479602 TFB2MQ9H5Q4 396 aaKnown RBP8.67□□□□□ -1.02
DDX56-211ENST00000479602 STN1Q9H668 368 aaKnown RBP8.67□□□□□ -1.02
DDX56-211ENST00000479602 FBXO6Q9NRD1 293 aaPredicted RBP8.67□□□□□ -1.02
DDX56-211ENST00000479602 KLC4Q9NSK0 619 aa8.67□□□□□ -1.02
DDX56-211ENST00000479602 MKS1Q9NXB0 559 aa8.67□□□□□ -1.02
DDX56-211ENST00000479602 SEMA5BQ9P283 1151 aa8.67□□□□□ -1.02
DDX56-211ENST00000479602 PSMC3IPQ9P2W1 217 aaPredicted RBP8.67□□□□□ -1.02
DDX56-211ENST00000479602 EPHA6Q9UF33 1036 aa8.67□□□□□ -1.02
DDX56-211ENST00000479602 TBC1D29Q9UFV1 150 aa8.67□□□□□ -1.02
DDX56-211ENST00000479602 PISDQ9UG56 409 aa8.67□□□□□ -1.02
DDX56-211ENST00000479602 POLG2Q9UHN1 485 aa8.67□□□□□ -1.02
DDX56-211ENST00000479602 ZNHIT2Q9UHR6 403 aa8.67□□□□□ -1.02
DDX56-211ENST00000479602 LGALS13Q9UHV8 139 aa8.67□□□□□ -1.02
DDX56-211ENST00000479602 DOLKQ9UPQ8 538 aa8.67□□□□□ -1.02
DDX56-211ENST00000479602 PCDHGA4Q9Y5G9 962 aa8.67□□□□□ -1.02
DDX56-211ENST00000479602 EXOC1LA0A1B0GW35 172 aa8.66□□□□□ -1.02
DDX56-211ENST00000479602 FAM95CA0A1B0GW59 222 aa8.66□□□□□ -1.02
DDX56-211ENST00000479602 CCDC78A2IDD5 438 aa8.66□□□□□ -1.02
DDX56-211ENST00000479602 HMX2A2RU54 273 aa8.66□□□□□ -1.02
DDX56-211ENST00000479602 CXorf49A8MYA2 514 aaPredicted RBP8.66□□□□□ -1.02
DDX56-211ENST00000479602 E5RI56 91 aa8.66□□□□□ -1.02
DDX56-211ENST00000479602 IFRD1O00458 451 aaPredicted RBP8.66□□□□□ -1.02
DDX56-211ENST00000479602 TOX3O15405 576 aaPredicted RBP8.66□□□□□ -1.02
DDX56-211ENST00000479602 ACSL3O95573 720 aa8.66□□□□□ -1.02
DDX56-211ENST00000479602 C8GP07360 202 aa8.66□□□□□ -1.02
DDX56-211ENST00000479602 INHBAP08476 426 aa8.66□□□□□ -1.02
DDX56-211ENST00000479602 MTHFD1P11586 935 aaKnown RBP8.66□□□□□ -1.02
DDX56-211ENST00000479602 GCAP28676 217 aa8.66□□□□□ -1.02
DDX56-211ENST00000479602 HSD17B3P37058 310 aa8.66□□□□□ -1.02
DDX56-211ENST00000479602 HSD17B2P37059 387 aa8.66□□□□□ -1.02
DDX56-211ENST00000479602 RGS4P49798 205 aa8.66□□□□□ -1.02
DDX56-211ENST00000479602 MAZP56270 477 aaKnown RBP8.66□□□□□ -1.02
DDX56-211ENST00000479602 AP1S2P56377 157 aa8.66□□□□□ -1.02
DDX56-211ENST00000479602 MPP1Q00013 466 aa8.66□□□□□ -1.02
DDX56-211ENST00000479602 TRA2AQ13595 282 aaKnown RBP eCLIP8.66□□□□□ -1.02
DDX56-211ENST00000479602 NFE2L1Q14494 772 aa8.66□□□□□ -1.02
DDX56-211ENST00000479602 SLC29A2Q14542 456 aa8.66□□□□□ -1.02
DDX56-211ENST00000479602 TCEA2Q15560 299 aa8.66□□□□□ -1.02
DDX56-211ENST00000479602 KCTD19Q17RG1 926 aaPredicted RBP8.66□□□□□ -1.02
DDX56-211ENST00000479602 TNFAIP8L3Q5GJ75 292 aa8.66□□□□□ -1.02
DDX56-211ENST00000479602 BEND6Q5SZJ8 279 aaPredicted RBP8.66□□□□□ -1.02
DDX56-211ENST00000479602 LGSNQ5TDP6 509 aa8.66□□□□□ -1.02
DDX56-211ENST00000479602 HECTD2Q5U5R9 776 aa8.66□□□□□ -1.02
DDX56-211ENST00000479602 DOK6Q6PKX4 331 aa8.66□□□□□ -1.02
DDX56-211ENST00000479602 LRIG3Q6UXM1 1119 aa8.66□□□□□ -1.02
DDX56-211ENST00000479602 CHST15Q7LFX5 561 aaPredicted RBP8.66□□□□□ -1.02
DDX56-211ENST00000479602 ARHGAP22Q7Z5H3 698 aa8.66□□□□□ -1.02
DDX56-211ENST00000479602 SLC9B2Q86UD5 537 aa8.66□□□□□ -1.02
DDX56-211ENST00000479602 PIM3Q86V86 326 aa8.66□□□□□ -1.02
DDX56-211ENST00000479602 DCUN1D3Q8IWE4 304 aa8.66□□□□□ -1.02
DDX56-211ENST00000479602 IQCKQ8N0W5 287 aa8.66□□□□□ -1.02
DDX56-211ENST00000479602 OTUD6BQ8N6M0 293 aa8.66□□□□□ -1.02
DDX56-211ENST00000479602 BMPERQ8N8U9 685 aa8.66□□□□□ -1.02
DDX56-211ENST00000479602 OR4D9Q8NGE8 314 aa8.66□□□□□ -1.02
DDX56-211ENST00000479602 GIMAP7Q8NHV1 300 aa8.66□□□□□ -1.02
DDX56-211ENST00000479602 RHEBL1Q8TAI7 183 aa8.66□□□□□ -1.02
DDX56-211ENST00000479602 LKAAEAR1Q8TD35 194 aa8.66□□□□□ -1.02
DDX56-211ENST00000479602 SLC37A2Q8TED4 501 aa8.66□□□□□ -1.02
DDX56-211ENST00000479602 ZDHHC1Q8WTX9 485 aa8.66□□□□□ -1.02
DDX56-211ENST00000479602 MZB1Q8WU39 189 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms