RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 TDRD1Q9BXT4 1180 aaKnown RBP2.39□□□□□ -2.03
HPS3-205ENST00000478525 THAP2Q9H0W7 228 aa2.39□□□□□ -2.03
HPS3-205ENST00000478525 PAG1Q9NWQ8 432 aa2.39□□□□□ -2.03
HPS3-205ENST00000478525 OSER1Q9NX31 292 aa2.39□□□□□ -2.03
HPS3-205ENST00000478525 TSPAN16Q9UKR8 245 aa2.39□□□□□ -2.03
HPS3-205ENST00000478525 VSIG4Q9Y279 399 aa2.39□□□□□ -2.03
HPS3-205ENST00000478525 PCDHGA5Q9Y5G8 931 aa2.39□□□□□ -2.03
HPS3-205ENST00000478525 STYXL1Q9Y6J8 313 aa2.39□□□□□ -2.03
HPS3-205ENST00000478525 DGKBQ9Y6T7 804 aa2.39□□□□□ -2.03
HPS3-205ENST00000478525 LOC105371242A0A075B767 164 aa2.38□□□□□ -2.03
HPS3-205ENST00000478525 HYKKA2RU49 373 aa2.38□□□□□ -2.03
HPS3-205ENST00000478525 ANKRD61A6NGH8 418 aa2.38□□□□□ -2.03
HPS3-205ENST00000478525 SCAMP1O15126 338 aa2.38□□□□□ -2.03
HPS3-205ENST00000478525 PHF1O43189 567 aaPredicted RBP2.38□□□□□ -2.03
HPS3-205ENST00000478525 VTNP04004 478 aa2.38□□□□□ -2.03
HPS3-205ENST00000478525 HLA-FP30511 346 aa2.38□□□□□ -2.03
HPS3-205ENST00000478525 OXTRP30559 389 aa2.38□□□□□ -2.03
HPS3-205ENST00000478525 CAPGP40121 348 aa2.38□□□□□ -2.03
HPS3-205ENST00000478525 TSFMP43897 325 aaKnown RBP2.38□□□□□ -2.03
HPS3-205ENST00000478525 RPS3AP61247 264 aaKnown RBP2.38□□□□□ -2.03
HPS3-205ENST00000478525 LYZP61626 148 aa2.38□□□□□ -2.03
HPS3-205ENST00000478525 FCHO2Q0JRZ9 810 aa2.38□□□□□ -2.03
HPS3-205ENST00000478525 TNIP1Q15025 636 aa2.38□□□□□ -2.03
HPS3-205ENST00000478525 C3AR1Q16581 482 aa2.38□□□□□ -2.03
HPS3-205ENST00000478525 ITPRIPL2Q3MIP1 535 aa2.38□□□□□ -2.03
HPS3-205ENST00000478525 PHLDA2Q53GA4 152 aa2.38□□□□□ -2.03
HPS3-205ENST00000478525 TMEM64Q6YI46 380 aa2.38□□□□□ -2.03
HPS3-205ENST00000478525 CLEC17AQ6ZS10 378 aa2.38□□□□□ -2.03
HPS3-205ENST00000478525 INTS8Q75QN2 995 aaKnown RBP2.38□□□□□ -2.03
HPS3-205ENST00000478525 TMEM139Q8IV31 216 aa2.38□□□□□ -2.03
HPS3-205ENST00000478525 PARP8Q8N3A8 854 aa2.38□□□□□ -2.03
HPS3-205ENST00000478525 OR52N5Q8NH56 324 aa2.38□□□□□ -2.03
HPS3-205ENST00000478525 IRGQQ8WZA9 623 aa2.38□□□□□ -2.03
HPS3-205ENST00000478525 ATXN7L3BQ96GX2 97 aa2.38□□□□□ -2.03
HPS3-205ENST00000478525 OR2A14Q96R47 310 aa2.38□□□□□ -2.03
HPS3-205ENST00000478525 C16orf70Q9BSU1 422 aa2.38□□□□□ -2.03
HPS3-205ENST00000478525 OR2B2Q9GZK3 357 aa2.38□□□□□ -2.03
HPS3-205ENST00000478525 SMC4Q9NTJ3 1288 aa2.38□□□□□ -2.03
HPS3-205ENST00000478525 COMMD10Q9Y6G5 202 aa2.38□□□□□ -2.03
HPS3-205ENST00000478525 UMODL1Q5DID0 1318 aa2.38□□□□□ -2.03
HPS3-205ENST00000478525 ZNF840PA6NDX5 716 aa2.37□□□□□ -2.03
HPS3-205ENST00000478525 RNASEH1O60930 286 aaKnown RBP2.37□□□□□ -2.03
HPS3-205ENST00000478525 KRT6AP02538 564 aa2.37□□□□□ -2.03
HPS3-205ENST00000478525 KRT6BP04259 564 aa2.37□□□□□ -2.03
HPS3-205ENST00000478525 SLC2A2P11168 524 aaPredicted RBP2.37□□□□□ -2.03
HPS3-205ENST00000478525 TMEM11P17152 192 aa2.37□□□□□ -2.03
HPS3-205ENST00000478525 KRT6CP48668 564 aa2.37□□□□□ -2.03
HPS3-205ENST00000478525 MELKQ14680 651 aa2.37□□□□□ -2.03
HPS3-205ENST00000478525 ASTE1Q2TB18 679 aaPredicted RBP2.37□□□□□ -2.03
HPS3-205ENST00000478525 ZSCAN23Q3MJ62 389 aa2.37□□□□□ -2.03
HPS3-205ENST00000478525 TIPARPQ7Z3E1 657 aaKnown RBP2.37□□□□□ -2.03
HPS3-205ENST00000478525 RTN4RL2Q86UN3 420 aa2.37□□□□□ -2.03
HPS3-205ENST00000478525 EID3Q8N140 333 aa2.37□□□□□ -2.03
HPS3-205ENST00000478525 TMTC2Q8N394 836 aa2.37□□□□□ -2.03
HPS3-205ENST00000478525 ESX1Q8N693 406 aa2.37□□□□□ -2.03
HPS3-205ENST00000478525 ETNPPLQ8TBG4 499 aa2.37□□□□□ -2.03
HPS3-205ENST00000478525 NPRL2Q8WTW4 380 aa2.37□□□□□ -2.03
HPS3-205ENST00000478525 ERLEC1Q96DZ1 483 aa2.37□□□□□ -2.03
HPS3-205ENST00000478525 RRP36Q96EU6 259 aaKnown RBP2.37□□□□□ -2.03
HPS3-205ENST00000478525 RPS6KC1Q96S38 1066 aa2.37□□□□□ -2.03
HPS3-205ENST00000478525 LGMNQ99538 433 aa2.37□□□□□ -2.03
HPS3-205ENST00000478525 PLK3Q9H4B4 646 aa2.37□□□□□ -2.03
HPS3-205ENST00000478525 TUBB1Q9H4B7 451 aa2.37□□□□□ -2.03
HPS3-205ENST00000478525 PPCSQ9HAB8 311 aa2.37□□□□□ -2.03
HPS3-205ENST00000478525 PPANQ9NQ55 473 aaKnown RBP2.37□□□□□ -2.03
HPS3-205ENST00000478525 AMACRQ9UHK6 382 aa2.37□□□□□ -2.03
HPS3-205ENST00000478525 NTNG1Q9Y2I2 539 aa2.37□□□□□ -2.03
HPS3-205ENST00000478525 A0A1W2PPH5 198 aa2.36□□□□□ -2.03
HPS3-205ENST00000478525 GALR3O60755 368 aaPredicted RBP2.36□□□□□ -2.03
HPS3-205ENST00000478525 ZNF354AO60765 605 aaPredicted RBP2.36□□□□□ -2.03
HPS3-205ENST00000478525 GLRA3O75311 464 aa2.36□□□□□ -2.03
HPS3-205ENST00000478525 CCNDBP1O95273 360 aa2.36□□□□□ -2.03
HPS3-205ENST00000478525 POP4O95707 220 aaKnown RBP2.36□□□□□ -2.03
HPS3-205ENST00000478525 XBP1P17861 261 aa2.36□□□□□ -2.03
HPS3-205ENST00000478525 SLC6A6P31641 620 aa2.36□□□□□ -2.03
HPS3-205ENST00000478525 RPL21P46778 160 aaKnown RBP2.36□□□□□ -2.03
HPS3-205ENST00000478525 LBX1P52954 281 aa2.36□□□□□ -2.03
HPS3-205ENST00000478525 MAZP56270 477 aaKnown RBP2.36□□□□□ -2.03
HPS3-205ENST00000478525 GCNT1Q02742 428 aa2.36□□□□□ -2.03
HPS3-205ENST00000478525 EFTUD2Q15029 972 aaKnown RBP eCLIP2.36□□□□□ -2.03
HPS3-205ENST00000478525 HERC3Q15034 1050 aa2.36□□□□□ -2.03
HPS3-205ENST00000478525 MED22Q15528 200 aa2.36□□□□□ -2.03
HPS3-205ENST00000478525 DLG2Q15700 870 aa2.36□□□□□ -2.03
HPS3-205ENST00000478525 PDLIM3Q53GG5 364 aaPredicted RBP2.36□□□□□ -2.03
HPS3-205ENST00000478525 PRR30Q53SZ7 412 aaPredicted RBP2.36□□□□□ -2.03
HPS3-205ENST00000478525 SPDYCQ5MJ68 293 aa2.36□□□□□ -2.03
HPS3-205ENST00000478525 R3HCC1LQ7Z5L2 792 aaKnown RBP2.36□□□□□ -2.03
HPS3-205ENST00000478525 FAM131BQ86XD5 332 aa2.36□□□□□ -2.03
HPS3-205ENST00000478525 ZFAND4Q86XD8 727 aa2.36□□□□□ -2.03
HPS3-205ENST00000478525 ARID3BQ8IVW6 561 aaPredicted RBP2.36□□□□□ -2.03
HPS3-205ENST00000478525 CFAP206Q8IYR0 622 aa2.36□□□□□ -2.03
HPS3-205ENST00000478525 MAP3K3Q99759 626 aa2.36□□□□□ -2.03
HPS3-205ENST00000478525 WASH6PQ9NQA3 447 aa2.36□□□□□ -2.03
HPS3-205ENST00000478525 ZHX1Q9UKY1 873 aaPredicted RBP2.36□□□□□ -2.03
HPS3-205ENST00000478525 NENFQ9UMX5 172 aa2.36□□□□□ -2.03
HPS3-205ENST00000478525 WIPI2Q9Y4P8 454 aa2.36□□□□□ -2.03
HPS3-205ENST00000478525 MUC19Q7Z5P9 8384 aa2.36□□□□□ -2.03
HPS3-205ENST00000478525 TFECO14948 347 aaPredicted RBP2.35□□□□□ -2.03
HPS3-205ENST00000478525 CDK2AP2O75956 126 aa2.35□□□□□ -2.03
HPS3-205ENST00000478525 DDHD2O94830 711 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms