RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 RPL10P27635 214 aaKnown RBP13.92□□□□□ -0.18
NPHP4-208ENST00000478423 LEPRP48357 1165 aaKnown RBP13.92□□□□□ -0.18
NPHP4-208ENST00000478423 PEX13Q92968 403 aa13.92□□□□□ -0.18
NPHP4-208ENST00000478423 BTBD9Q96Q07 612 aa13.92□□□□□ -0.18
NPHP4-208ENST00000478423 CCM2Q9BSQ5 444 aa13.92□□□□□ -0.18
NPHP4-208ENST00000478423 WDR6Q9NNW5 1121 aaKnown RBP13.92□□□□□ -0.18
NPHP4-208ENST00000478423 TOR4AQ9NXH8 423 aa13.92□□□□□ -0.18
NPHP4-208ENST00000478423 FBXL12Q9NXK8 326 aa13.92□□□□□ -0.18
NPHP4-208ENST00000478423 MARCH4Q9P2E8 410 aaPredicted RBP13.92□□□□□ -0.18
NPHP4-208ENST00000478423 PAIP2BQ9ULR5 123 aaKnown RBP13.92□□□□□ -0.18
NPHP4-208ENST00000478423 PLCH1Q4KWH8 1693 aa13.92□□□□□ -0.18
NPHP4-208ENST00000478423 VEGFBP49765 207 aa13.92□□□□□ -0.18
NPHP4-208ENST00000478423 ITGA1P56199 1179 aa13.92□□□□□ -0.18
NPHP4-208ENST00000478423 MED22Q15528 200 aa13.92□□□□□ -0.18
NPHP4-208ENST00000478423 FAM171BQ6P995 826 aa13.92□□□□□ -0.18
NPHP4-208ENST00000478423 GALNT18Q6P9A2 607 aa13.92□□□□□ -0.18
NPHP4-208ENST00000478423 THAP5Q7Z6K1 395 aa13.92□□□□□ -0.18
NPHP4-208ENST00000478423 ZDHHC21Q8IVQ6 265 aa13.92□□□□□ -0.18
NPHP4-208ENST00000478423 C12orf76Q8N812 135 aaPredicted RBP13.92□□□□□ -0.18
NPHP4-208ENST00000478423 WDR60Q8WVS4 1066 aa13.92□□□□□ -0.18
NPHP4-208ENST00000478423 ZHX1-C8orf76Q96EF9 292 aa13.92□□□□□ -0.18
NPHP4-208ENST00000478423 RAB26Q9ULW5 256 aa13.92□□□□□ -0.18
NPHP4-208ENST00000478423 ERN1O75460 977 aaKnown RBP13.92□□□□□ -0.18
NPHP4-208ENST00000478423 RFPL2O75678 378 aa13.92□□□□□ -0.18
NPHP4-208ENST00000478423 HLA-DQA2P01906 255 aa13.92□□□□□ -0.18
NPHP4-208ENST00000478423 SLC35E2BP0CK96 405 aa13.92□□□□□ -0.18
NPHP4-208ENST00000478423 NR2F6P10588 404 aa13.92□□□□□ -0.18
NPHP4-208ENST00000478423 MYCLP1P12525 358 aaPredicted RBP13.92□□□□□ -0.18
NPHP4-208ENST00000478423 GLDCP23378 1020 aa13.92□□□□□ -0.18
NPHP4-208ENST00000478423 RGS8P57771 180 aaPredicted RBP13.92□□□□□ -0.18
NPHP4-208ENST00000478423 NFATC2Q13469 925 aa13.92□□□□□ -0.18
NPHP4-208ENST00000478423 MINDY4Q4G0A6 757 aa13.92□□□□□ -0.18
NPHP4-208ENST00000478423 LRRTM4Q86VH4 590 aa13.92□□□□□ -0.18
NPHP4-208ENST00000478423 FAM81AQ8TBF8 368 aa13.92□□□□□ -0.18
NPHP4-208ENST00000478423 HMGB4Q8WW32 186 aa13.92□□□□□ -0.18
NPHP4-208ENST00000478423 RTP4Q96DX8 246 aa13.92□□□□□ -0.18
NPHP4-208ENST00000478423 MOCOSQ96EN8 888 aa13.92□□□□□ -0.18
NPHP4-208ENST00000478423 CGREF1Q99674 301 aa13.92□□□□□ -0.18
NPHP4-208ENST00000478423 SERHL2Q9H4I8 314 aa13.92□□□□□ -0.18
NPHP4-208ENST00000478423 COQ10BQ9H8M1 238 aa13.92□□□□□ -0.18
NPHP4-208ENST00000478423 POLMQ9NP87 494 aaPredicted RBP13.92□□□□□ -0.18
NPHP4-208ENST00000478423 SERHLQ9NQF3 203 aa13.92□□□□□ -0.18
NPHP4-208ENST00000478423 IFT80Q9P2H3 777 aaPredicted RBP13.92□□□□□ -0.18
NPHP4-208ENST00000478423 RSL24D1Q9UHA3 163 aaKnown RBP13.92□□□□□ -0.18
NPHP4-208ENST00000478423 STX11O75558 287 aa13.91□□□□□ -0.18
NPHP4-208ENST00000478423 ADGRE1Q14246 886 aa13.91□□□□□ -0.18
NPHP4-208ENST00000478423 PRAMEF14Q5SWL7 426 aa13.91□□□□□ -0.18
NPHP4-208ENST00000478423 PRAMEF13Q5VWM6 474 aa13.91□□□□□ -0.18
NPHP4-208ENST00000478423 AGTRAPQ6RW13 159 aa13.91□□□□□ -0.18
NPHP4-208ENST00000478423 ENPP7Q6UWV6 458 aa13.91□□□□□ -0.18
NPHP4-208ENST00000478423 C1orf52Q8N6N3 182 aaKnown RBP13.91□□□□□ -0.18
NPHP4-208ENST00000478423 TMEM174Q8WUU8 243 aa13.91□□□□□ -0.18
NPHP4-208ENST00000478423 PGAP3Q96FM1 320 aaPredicted RBP13.91□□□□□ -0.18
NPHP4-208ENST00000478423 DEPDC7Q96QD5 511 aa13.91□□□□□ -0.18
NPHP4-208ENST00000478423 REXO4Q9GZR2 422 aaKnown RBP13.91□□□□□ -0.18
NPHP4-208ENST00000478423 ZDHHC4Q9NPG8 344 aa13.91□□□□□ -0.18
NPHP4-208ENST00000478423 SPHK2Q9NRA0 654 aa13.91□□□□□ -0.18
NPHP4-208ENST00000478423 MRPS17Q9Y2R5 130 aaKnown RBP13.91□□□□□ -0.18
NPHP4-208ENST00000478423 TRIM43BA6NCK2 446 aa13.91□□□□□ -0.18
NPHP4-208ENST00000478423 K7ERQ8 282 aa13.91□□□□□ -0.18
NPHP4-208ENST00000478423 CCNA2P20248 432 aa13.91□□□□□ -0.18
NPHP4-208ENST00000478423 ALAS2P22557 587 aa13.91□□□□□ -0.18
NPHP4-208ENST00000478423 VARSP26640 1264 aaKnown RBP13.91□□□□□ -0.18
NPHP4-208ENST00000478423 ITPKBP27987 946 aa13.91□□□□□ -0.18
NPHP4-208ENST00000478423 AGTR2P50052 363 aa13.91□□□□□ -0.18
NPHP4-208ENST00000478423 CASP9P55211 416 aa13.91□□□□□ -0.18
NPHP4-208ENST00000478423 SEMA3AQ14563 771 aa13.91□□□□□ -0.18
NPHP4-208ENST00000478423 UBAP2Q5T6F2 1119 aaKnown RBP13.91□□□□□ -0.18
NPHP4-208ENST00000478423 RSBN1Q5VWQ0 802 aaPredicted RBP13.91□□□□□ -0.18
NPHP4-208ENST00000478423 TRIQKQ629K1 86 aa13.91□□□□□ -0.18
NPHP4-208ENST00000478423 SLC39A5Q6ZMH5 540 aa13.91□□□□□ -0.18
NPHP4-208ENST00000478423 OTUB2Q96DC9 234 aa13.91□□□□□ -0.18
NPHP4-208ENST00000478423 DGCR14Q96DF8 476 aaKnown RBP13.91□□□□□ -0.18
NPHP4-208ENST00000478423 CRISPLD1Q9H336 500 aa13.91□□□□□ -0.18
NPHP4-208ENST00000478423 MAGEE1Q9HCI5 957 aa13.91□□□□□ -0.18
NPHP4-208ENST00000478423 ZBTB26Q9HCK0 441 aa13.91□□□□□ -0.18
NPHP4-208ENST00000478423 ELOVL2Q9NXB9 296 aa13.91□□□□□ -0.18
NPHP4-208ENST00000478423 TRPS1Q9UHF7 1281 aa13.91□□□□□ -0.18
NPHP4-208ENST00000478423 TESMINQ9Y4I5 508 aa13.91□□□□□ -0.18
NPHP4-208ENST00000478423 CHURC1-FNTBB4DL54 471 aa13.91□□□□□ -0.18
NPHP4-208ENST00000478423 BCKDKO14874 412 aa13.91□□□□□ -0.18
NPHP4-208ENST00000478423 STXBP1P61764 594 aaKnown RBP13.91□□□□□ -0.18
NPHP4-208ENST00000478423 TOMM20Q15388 145 aa13.91□□□□□ -0.18
NPHP4-208ENST00000478423 TEAD4Q15561 434 aa13.91□□□□□ -0.18
NPHP4-208ENST00000478423 HKDC1Q2TB90 917 aa13.91□□□□□ -0.18
NPHP4-208ENST00000478423 KLHL12Q53G59 568 aa13.91□□□□□ -0.18
NPHP4-208ENST00000478423 ZNF678Q5SXM1 525 aa13.91□□□□□ -0.18
NPHP4-208ENST00000478423 CST9Q5W186 159 aa13.91□□□□□ -0.18
NPHP4-208ENST00000478423 TNFAIP8L2Q6P589 184 aaPredicted RBP13.91□□□□□ -0.18
NPHP4-208ENST00000478423 ZNF783Q6ZMS7 281 aa13.91□□□□□ -0.18
NPHP4-208ENST00000478423 LRRC70Q7Z2Q7 622 aa13.91□□□□□ -0.18
NPHP4-208ENST00000478423 GOLGA7Q7Z5G4 137 aa13.91□□□□□ -0.18
NPHP4-208ENST00000478423 TRIM74Q86UV6 250 aa13.91□□□□□ -0.18
NPHP4-208ENST00000478423 ADGRG2Q8IZP9 1017 aa13.91□□□□□ -0.18
NPHP4-208ENST00000478423 ASB9Q96DX5 294 aa13.91□□□□□ -0.18
NPHP4-208ENST00000478423 HDHD2Q9H0R4 259 aa13.91□□□□□ -0.18
NPHP4-208ENST00000478423 RGS17Q9UGC6 210 aaPredicted RBP13.91□□□□□ -0.18
NPHP4-208ENST00000478423 DHRS7Q9Y394 339 aa13.91□□□□□ -0.18
NPHP4-208ENST00000478423 LEFTY1O75610 366 aa13.9□□□□□ -0.18
NPHP4-208ENST00000478423 S1PR4O95977 384 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms