RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 MPP5Q8N3R9 675 aa13.95□□□□□ -0.18
SMARCE1-209ENST00000478349 GLIS1Q8NBF1 620 aa13.95□□□□□ -0.18
SMARCE1-209ENST00000478349 OR13J1Q8NGT2 312 aa13.95□□□□□ -0.18
SMARCE1-209ENST00000478349 MAIP1Q8WWC4 291 aa13.95□□□□□ -0.18
SMARCE1-209ENST00000478349 ATG4AQ8WYN0 398 aa13.95□□□□□ -0.18
SMARCE1-209ENST00000478349 HDAC10Q969S8 669 aa13.95□□□□□ -0.18
SMARCE1-209ENST00000478349 VPS50Q96JG6 964 aa13.95□□□□□ -0.18
SMARCE1-209ENST00000478349 PANX3Q96QZ0 392 aa13.95□□□□□ -0.18
SMARCE1-209ENST00000478349 OR2A14Q96R47 310 aa13.95□□□□□ -0.18
SMARCE1-209ENST00000478349 DESI2Q9BSY9 194 aa13.95□□□□□ -0.18
SMARCE1-209ENST00000478349 RBSNQ9H1K0 784 aa13.95□□□□□ -0.18
SMARCE1-209ENST00000478349 ETNK1Q9HBU6 452 aa13.95□□□□□ -0.18
SMARCE1-209ENST00000478349 SLAMF7Q9NQ25 335 aa13.95□□□□□ -0.18
SMARCE1-209ENST00000478349 RAB6BQ9NRW1 208 aa13.95□□□□□ -0.18
SMARCE1-209ENST00000478349 C5AR2Q9P296 337 aa13.95□□□□□ -0.18
SMARCE1-209ENST00000478349 IFT80Q9P2H3 777 aaPredicted RBP13.95□□□□□ -0.18
SMARCE1-209ENST00000478349 PLCL2Q9UPR0 1127 aa13.95□□□□□ -0.18
SMARCE1-209ENST00000478349 LRRK2Q5S007 2527 aa13.94□□□□□ -0.18
SMARCE1-209ENST00000478349 OR51F1A6NGY5 319 aa13.94□□□□□ -0.18
SMARCE1-209ENST00000478349 K7EM74 188 aa13.94□□□□□ -0.18
SMARCE1-209ENST00000478349 S1PR4O95977 384 aa13.94□□□□□ -0.18
SMARCE1-209ENST00000478349 APRTP07741 180 aa13.94□□□□□ -0.18
SMARCE1-209ENST00000478349 PRSS56P0CW18 603 aa13.94□□□□□ -0.18
SMARCE1-209ENST00000478349 GP1BBP13224 206 aa13.94□□□□□ -0.18
SMARCE1-209ENST00000478349 OTX2P32243 289 aa13.94□□□□□ -0.18
SMARCE1-209ENST00000478349 ARSFP54793 590 aa13.94□□□□□ -0.18
SMARCE1-209ENST00000478349 ACVR1Q04771 509 aa13.94□□□□□ -0.18
SMARCE1-209ENST00000478349 HSPA14Q0VDF9 509 aa13.94□□□□□ -0.18
SMARCE1-209ENST00000478349 ATP1A4Q13733 1029 aa13.94□□□□□ -0.18
SMARCE1-209ENST00000478349 SSPNQ14714 243 aa13.94□□□□□ -0.18
SMARCE1-209ENST00000478349 NAA25Q14CX7 972 aa13.94□□□□□ -0.18
SMARCE1-209ENST00000478349 OASLQ15646 514 aaKnown RBP13.94□□□□□ -0.18
SMARCE1-209ENST00000478349 ZC3H12BQ5HYM0 836 aaKnown RBP13.94□□□□□ -0.18
SMARCE1-209ENST00000478349 MRGPREQ86SM8 312 aa13.94□□□□□ -0.18
SMARCE1-209ENST00000478349 TRIM73Q86UV7 250 aa13.94□□□□□ -0.18
SMARCE1-209ENST00000478349 LRRC6Q86X45 466 aa13.94□□□□□ -0.18
SMARCE1-209ENST00000478349 NACC2Q96BF6 587 aa13.94□□□□□ -0.18
SMARCE1-209ENST00000478349 EIF2B3Q9NR50 452 aaKnown RBP13.94□□□□□ -0.18
SMARCE1-209ENST00000478349 CATSPERZQ9NTU4 200 aa13.94□□□□□ -0.18
SMARCE1-209ENST00000478349 GNPTGQ9UJJ9 305 aa13.94□□□□□ -0.18
SMARCE1-209ENST00000478349 TCAF1Q9Y4C2 921 aa13.94□□□□□ -0.18
SMARCE1-209ENST00000478349 CAPN6Q9Y6Q1 641 aa13.94□□□□□ -0.18
SMARCE1-209ENST00000478349 CLEC18AA5D8T8 446 aa13.93□□□□□ -0.18
SMARCE1-209ENST00000478349 PRMT5O14744 637 aaPredicted RBP13.93□□□□□ -0.18
SMARCE1-209ENST00000478349 PDGFAP04085 211 aa13.93□□□□□ -0.18
SMARCE1-209ENST00000478349 PKLRP30613 574 aa13.93□□□□□ -0.18
SMARCE1-209ENST00000478349 CYP2A13Q16696 494 aa13.93□□□□□ -0.18
SMARCE1-209ENST00000478349 KYNUQ16719 465 aa13.93□□□□□ -0.18
SMARCE1-209ENST00000478349 FHL5Q5TD97 284 aa13.93□□□□□ -0.18
SMARCE1-209ENST00000478349 IRAK1BP1Q5VVH5 260 aa13.93□□□□□ -0.18
SMARCE1-209ENST00000478349 YOD1Q5VVQ6 348 aaPredicted RBP13.93□□□□□ -0.18
SMARCE1-209ENST00000478349 MLIPQ5VWP3 458 aa13.93□□□□□ -0.18
SMARCE1-209ENST00000478349 PTRHD1Q6GMV3 140 aaKnown RBP13.93□□□□□ -0.18
SMARCE1-209ENST00000478349 CLEC18BQ6UXF7 455 aa13.93□□□□□ -0.18
SMARCE1-209ENST00000478349 SLC13A5Q86YT5 568 aaPredicted RBP13.93□□□□□ -0.18
SMARCE1-209ENST00000478349 TMEM139Q8IV31 216 aa13.93□□□□□ -0.18
SMARCE1-209ENST00000478349 CLEC18CQ8NCF0 446 aa13.93□□□□□ -0.18
SMARCE1-209ENST00000478349 OR2Y1Q8NGV0 311 aa13.93□□□□□ -0.18
SMARCE1-209ENST00000478349 MAGEC3Q8TD91 643 aa13.93□□□□□ -0.18
SMARCE1-209ENST00000478349 PNPLA2Q96AD5 504 aa13.93□□□□□ -0.18
SMARCE1-209ENST00000478349 FOPNLQ96NB1 174 aa13.93□□□□□ -0.18
SMARCE1-209ENST00000478349 CARD6Q9BX69 1037 aa13.93□□□□□ -0.18
SMARCE1-209ENST00000478349 IL22Q9GZX6 179 aa13.93□□□□□ -0.18
SMARCE1-209ENST00000478349 LRRC4CQ9HCJ2 640 aa13.93□□□□□ -0.18
SMARCE1-209ENST00000478349 CASS4Q9NQ75 786 aa13.93□□□□□ -0.18
SMARCE1-209ENST00000478349 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.93□□□□□ -0.18
SMARCE1-209ENST00000478349 SLC39A10Q9ULF5 831 aa13.93□□□□□ -0.18
SMARCE1-209ENST00000478349 ZKSCAN5Q9Y2L8 839 aa13.93□□□□□ -0.18
SMARCE1-209ENST00000478349 PTRH2Q9Y3E5 179 aaKnown RBP13.93□□□□□ -0.18
SMARCE1-209ENST00000478349 PRSS21Q9Y6M0 314 aa13.93□□□□□ -0.18
SMARCE1-209ENST00000478349 TCRBV7S2A1N4TA0A589 114 aa13.92□□□□□ -0.18
SMARCE1-209ENST00000478349 BHMG1C9JSJ3 638 aaPredicted RBP13.92□□□□□ -0.18
SMARCE1-209ENST00000478349 ZNF185O15231 689 aa13.92□□□□□ -0.18
SMARCE1-209ENST00000478349 OR1I1O60431 355 aa13.92□□□□□ -0.18
SMARCE1-209ENST00000478349 SORBS2O94875 1100 aaKnown RBP13.92□□□□□ -0.18
SMARCE1-209ENST00000478349 AGFG2O95081 481 aa13.92□□□□□ -0.18
SMARCE1-209ENST00000478349 CAPN1P07384 714 aa13.92□□□□□ -0.18
SMARCE1-209ENST00000478349 ITGAXP20702 1163 aa13.92□□□□□ -0.18
SMARCE1-209ENST00000478349 SRSF1Q07955 248 aaKnown RBP eCLIP13.92□□□□□ -0.18
SMARCE1-209ENST00000478349 RPS6KA1Q15418 735 aa13.92□□□□□ -0.18
SMARCE1-209ENST00000478349 DEFB110Q30KQ9 67 aa13.92□□□□□ -0.18
SMARCE1-209ENST00000478349 NKAIN1Q4KMZ8 207 aa13.92□□□□□ -0.18
SMARCE1-209ENST00000478349 TCTE1Q5JU00 501 aa13.92□□□□□ -0.18
SMARCE1-209ENST00000478349 PCID2Q5JVF3 399 aa13.92□□□□□ -0.18
SMARCE1-209ENST00000478349 RNF187Q5TA31 235 aaPredicted RBP13.92□□□□□ -0.18
SMARCE1-209ENST00000478349 ZNF385CQ66K41 422 aaPredicted RBP13.92□□□□□ -0.18
SMARCE1-209ENST00000478349 LCN10Q6JVE6 187 aa13.92□□□□□ -0.18
SMARCE1-209ENST00000478349 JMJD6Q6NYC1 403 aaPredicted RBP13.92□□□□□ -0.18
SMARCE1-209ENST00000478349 GSTA5Q7RTV2 222 aa13.92□□□□□ -0.18
SMARCE1-209ENST00000478349 ZBTB2Q8N680 514 aa13.92□□□□□ -0.18
SMARCE1-209ENST00000478349 OTUD6BQ8N6M0 293 aa13.92□□□□□ -0.18
SMARCE1-209ENST00000478349 ZNF655Q8N720 491 aaPredicted RBP13.92□□□□□ -0.18
SMARCE1-209ENST00000478349 FDCSPQ8NFU4 85 aa13.92□□□□□ -0.18
SMARCE1-209ENST00000478349 SKA2Q8WVK7 121 aaPredicted RBP13.92□□□□□ -0.18
SMARCE1-209ENST00000478349 FKBP10Q96AY3 582 aa13.92□□□□□ -0.18
SMARCE1-209ENST00000478349 PTERQ96BW5 349 aa13.92□□□□□ -0.18
SMARCE1-209ENST00000478349 GBP5Q96PP8 586 aa13.92□□□□□ -0.18
SMARCE1-209ENST00000478349 SMAD5Q99717 465 aaKnown RBP13.92□□□□□ -0.18
SMARCE1-209ENST00000478349 SPHK1Q9NYA1 384 aa13.92□□□□□ -0.18
SMARCE1-209ENST00000478349 BFARQ9NZS9 450 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms