RNA–Protein interactions for RNA: ENST00000478075.1

CALD1-218, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 193 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-218ENST00000478075 ZNF146Q15072 292 aa0.7□□□□□ -2.3
CALD1-218ENST00000478075 SLC9B1Q4ZJI4 515 aa0.7□□□□□ -2.3
CALD1-218ENST00000478075 SOWAHCQ53LP3 525 aaPredicted RBP0.7□□□□□ -2.3
CALD1-218ENST00000478075 TFDP3Q5H9I0 405 aa0.7□□□□□ -2.3
CALD1-218ENST00000478075 MARC1Q5VT66 337 aa0.7□□□□□ -2.3
CALD1-218ENST00000478075 ADALQ6DHV7 355 aa0.7□□□□□ -2.3
CALD1-218ENST00000478075 SLC22A25Q6T423 547 aa0.7□□□□□ -2.3
CALD1-218ENST00000478075 PAMR1Q6UXH9 720 aa0.7□□□□□ -2.3
CALD1-218ENST00000478075 C3P1Q6ZMU1 363 aa0.7□□□□□ -2.3
CALD1-218ENST00000478075 LRRC8DQ7L1W4 858 aa0.7□□□□□ -2.3
CALD1-218ENST00000478075 GSTA5Q7RTV2 222 aa0.7□□□□□ -2.3
CALD1-218ENST00000478075 GALNT5Q7Z7M9 940 aa0.7□□□□□ -2.3
CALD1-218ENST00000478075 MOGAT3Q86VF5 341 aa0.7□□□□□ -2.3
CALD1-218ENST00000478075 CATSPER3Q86XQ3 398 aa0.7□□□□□ -2.3
CALD1-218ENST00000478075 CEP97Q8IW35 865 aa0.7□□□□□ -2.3
CALD1-218ENST00000478075 PHLDA1Q8WV24 401 aaPredicted RBP0.7□□□□□ -2.3
CALD1-218ENST00000478075 FAM122AQ96E09 287 aa0.7□□□□□ -2.3
CALD1-218ENST00000478075 COG8Q96MW5 612 aa0.7□□□□□ -2.3
CALD1-218ENST00000478075 LMF2Q9BU23 707 aaKnown RBP0.7□□□□□ -2.3
CALD1-218ENST00000478075 ABHD6Q9BV23 337 aa0.7□□□□□ -2.3
CALD1-218ENST00000478075 THAP2Q9H0W7 228 aa0.7□□□□□ -2.3
CALD1-218ENST00000478075 PRKRIP1Q9H875 184 aaPredicted RBP0.7□□□□□ -2.3
CALD1-218ENST00000478075 MTHFD2LQ9H903 347 aaPredicted RBP0.7□□□□□ -2.3
CALD1-218ENST00000478075 ZNF701Q9NV72 531 aaPredicted RBP0.7□□□□□ -2.3
CALD1-218ENST00000478075 MTMR10Q9NXD2 777 aa0.7□□□□□ -2.3
CALD1-218ENST00000478075 PPP1R14DQ9NXH3 145 aa0.7□□□□□ -2.3
CALD1-218ENST00000478075 ABI3Q9P2A4 366 aa0.7□□□□□ -2.3
CALD1-218ENST00000478075 DBNLQ9UJU6 430 aaKnown RBP0.7□□□□□ -2.3
CALD1-218ENST00000478075 KLK12Q9UKR0 248 aa0.7□□□□□ -2.3
CALD1-218ENST00000478075 A0A1W2PQM1 296 aa0.69□□□□□ -2.3
CALD1-218ENST00000478075 SMAD9O15198 467 aaKnown RBP0.69□□□□□ -2.3
CALD1-218ENST00000478075 PCP11498 1178 aaKnown RBP0.69□□□□□ -2.3
CALD1-218ENST00000478075 RPS2P15880 293 aaKnown RBP0.69□□□□□ -2.3
CALD1-218ENST00000478075 PSMC2P35998 433 aaKnown RBP0.69□□□□□ -2.3
CALD1-218ENST00000478075 PAPOLAP51003 745 aaKnown RBP0.69□□□□□ -2.3
CALD1-218ENST00000478075 XGP55808 180 aa0.69□□□□□ -2.3
CALD1-218ENST00000478075 MAZP56270 477 aaKnown RBP0.69□□□□□ -2.3
CALD1-218ENST00000478075 WNT4P56705 351 aa0.69□□□□□ -2.3
CALD1-218ENST00000478075 KRTAP12-3P60328 96 aa0.69□□□□□ -2.3
CALD1-218ENST00000478075 CX3CL1P78423 397 aa0.69□□□□□ -2.3
CALD1-218ENST00000478075 EBI3Q14213 229 aa0.69□□□□□ -2.3
CALD1-218ENST00000478075 SQLEQ14534 574 aa0.69□□□□□ -2.3
CALD1-218ENST00000478075 TAB1Q15750 504 aa0.69□□□□□ -2.3
CALD1-218ENST00000478075 NFIL3Q16649 462 aa0.69□□□□□ -2.3
CALD1-218ENST00000478075 MEP1AQ16819 746 aa0.69□□□□□ -2.3
CALD1-218ENST00000478075 CCDC38Q502W7 563 aa0.69□□□□□ -2.3
CALD1-218ENST00000478075 TMUB2Q71RG4 321 aa0.69□□□□□ -2.3
CALD1-218ENST00000478075 TPRX1Q8N7U7 411 aa0.69□□□□□ -2.3
CALD1-218ENST00000478075 OR5T2Q8NGG2 359 aa0.69□□□□□ -2.3
CALD1-218ENST00000478075 OR10G7Q8NGN6 311 aa0.69□□□□□ -2.3
CALD1-218ENST00000478075 GSDMBQ8TAX9 411 aa0.69□□□□□ -2.3
CALD1-218ENST00000478075 APOBEC4Q8WW27 367 aaKnown RBP0.69□□□□□ -2.3
CALD1-218ENST00000478075 PSPC1Q8WXF1 523 aaKnown RBP0.69□□□□□ -2.3
CALD1-218ENST00000478075 GTF3C6Q969F1 213 aa0.69□□□□□ -2.3
CALD1-218ENST00000478075 RILPL2Q969X0 211 aa0.69□□□□□ -2.3
CALD1-218ENST00000478075 TBC1D20Q96BZ9 403 aa0.69□□□□□ -2.3
CALD1-218ENST00000478075 SPAG5Q96R06 1193 aa0.69□□□□□ -2.3
CALD1-218ENST00000478075 SLC22A12Q96S37 553 aa0.69□□□□□ -2.3
CALD1-218ENST00000478075 SEPT5Q99719 369 aaPredicted RBP0.69□□□□□ -2.3
CALD1-218ENST00000478075 KIFC3Q9BVG8 833 aa0.69□□□□□ -2.3
CALD1-218ENST00000478075 RBM24Q9BX46 236 aaKnown RBP0.69□□□□□ -2.3
CALD1-218ENST00000478075 VN1R1Q9GZP7 353 aa0.69□□□□□ -2.3
CALD1-218ENST00000478075 P4HTMQ9NXG6 502 aa0.69□□□□□ -2.3
CALD1-218ENST00000478075 ABHD14A-ACY1A0A1B0GW23 586 aa0.68□□□□□ -2.3
CALD1-218ENST00000478075 PINLYPA6NC86 204 aa0.68□□□□□ -2.3
CALD1-218ENST00000478075 ANKRD61A6NGH8 418 aa0.68□□□□□ -2.3
CALD1-218ENST00000478075 G3V2L1 256 aa0.68□□□□□ -2.3
CALD1-218ENST00000478075 GAPDHSO14556 408 aaPredicted RBP0.68□□□□□ -2.3
CALD1-218ENST00000478075 RNASEH1O60930 286 aaKnown RBP0.68□□□□□ -2.3
CALD1-218ENST00000478075 NKX2-2O95096 273 aa0.68□□□□□ -2.3
CALD1-218ENST00000478075 PGM1P36871 562 aa0.68□□□□□ -2.3
CALD1-218ENST00000478075 RBMXP38159 391 aaKnown RBP0.68□□□□□ -2.3
CALD1-218ENST00000478075 ARL1P40616 181 aaPredicted RBP0.68□□□□□ -2.3
CALD1-218ENST00000478075 ATP4BP51164 291 aa0.68□□□□□ -2.3
CALD1-218ENST00000478075 TAS2R40P59535 323 aa0.68□□□□□ -2.3
CALD1-218ENST00000478075 FKBP3Q00688 224 aaKnown RBP0.68□□□□□ -2.3
CALD1-218ENST00000478075 TDGQ13569 410 aa0.68□□□□□ -2.3
CALD1-218ENST00000478075 ADIPOQQ15848 244 aa0.68□□□□□ -2.3
CALD1-218ENST00000478075 ZNF74Q16587 644 aa0.68□□□□□ -2.3
CALD1-218ENST00000478075 SLC25A53Q5H9E4 307 aa0.68□□□□□ -2.3
CALD1-218ENST00000478075 LCN1P1Q5VSP4 162 aa0.68□□□□□ -2.3
CALD1-218ENST00000478075 IL31Q6EBC2 164 aa0.68□□□□□ -2.3
CALD1-218ENST00000478075 CCDC174Q6PII3 467 aa0.68□□□□□ -2.3
CALD1-218ENST00000478075 BBS12Q6ZW61 710 aa0.68□□□□□ -2.3
CALD1-218ENST00000478075 GALNT13Q8IUC8 556 aa0.68□□□□□ -2.3
CALD1-218ENST00000478075 TMEM139Q8IV31 216 aa0.68□□□□□ -2.3
CALD1-218ENST00000478075 EID3Q8N140 333 aa0.68□□□□□ -2.3
CALD1-218ENST00000478075 OR52N5Q8NH56 324 aa0.68□□□□□ -2.3
CALD1-218ENST00000478075 LINC01006Q8NI28 216 aa0.68□□□□□ -2.3
CALD1-218ENST00000478075 RNF128Q8TEB7 428 aa0.68□□□□□ -2.3
CALD1-218ENST00000478075 RNF138Q8WVD3 245 aa0.68□□□□□ -2.3
CALD1-218ENST00000478075 MXD3Q9BW11 206 aa0.68□□□□□ -2.3
CALD1-218ENST00000478075 FAM49AQ9H0Q0 323 aaPredicted RBP0.68□□□□□ -2.3
CALD1-218ENST00000478075 NTN4Q9HB63 628 aa0.68□□□□□ -2.3
CALD1-218ENST00000478075 NPAP1Q9NZP6 1156 aa0.68□□□□□ -2.3
CALD1-218ENST00000478075 TSPYL4Q9UJ04 414 aa0.68□□□□□ -2.3
CALD1-218ENST00000478075 RAB26Q9ULW5 256 aa0.68□□□□□ -2.3
CALD1-218ENST00000478075 PA2G4Q9UQ80 394 aaKnown RBP0.68□□□□□ -2.3
CALD1-218ENST00000478075 MUC6Q6W4X9 2439 aa0.68□□□□□ -2.3
CALD1-218ENST00000478075 PTCH1Q13635 1447 aa0.67□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms