RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 VPS37BQ9H9H4 285 aa19.45■□□□□ 0.7
PDLIM1-202ENST00000477757 SPHK1Q9NYA1 384 aa19.45■□□□□ 0.7
PDLIM1-202ENST00000477757 NIPBLQ6KC79 2804 aaeCLIP19.45■□□□□ 0.7
PDLIM1-202ENST00000477757 PCNX1Q96RV3 2341 aa19.44■□□□□ 0.7
PDLIM1-202ENST00000477757 A0A1B0GTH6 734 aa19.44■□□□□ 0.7
PDLIM1-202ENST00000477757 UNC5CO95185 931 aa19.44■□□□□ 0.7
PDLIM1-202ENST00000477757 PIM1P11309 404 aaPredicted RBP19.44■□□□□ 0.7
PDLIM1-202ENST00000477757 ATP1B2P14415 290 aaPredicted RBP19.44■□□□□ 0.7
PDLIM1-202ENST00000477757 ALAS2P22557 587 aa19.44■□□□□ 0.7
PDLIM1-202ENST00000477757 TNFSF10P50591 281 aa19.44■□□□□ 0.7
PDLIM1-202ENST00000477757 DYNLT1P63172 113 aa19.44■□□□□ 0.7
PDLIM1-202ENST00000477757 ARG2P78540 354 aa19.44■□□□□ 0.7
PDLIM1-202ENST00000477757 TAF1AQ15573 450 aaPredicted RBP19.44■□□□□ 0.7
PDLIM1-202ENST00000477757 NFKBIBQ15653 356 aa19.44■□□□□ 0.7
PDLIM1-202ENST00000477757 TTLL10Q6ZVT0 673 aa19.44■□□□□ 0.7
PDLIM1-202ENST00000477757 CDH24Q86UP0 819 aa19.44■□□□□ 0.7
PDLIM1-202ENST00000477757 RFX6Q8HWS3 928 aa19.44■□□□□ 0.7
PDLIM1-202ENST00000477757 HEXDCQ8WVB3 486 aa19.44■□□□□ 0.7
PDLIM1-202ENST00000477757 TFB1MQ8WVM0 346 aaKnown RBP19.44■□□□□ 0.7
PDLIM1-202ENST00000477757 FSD1LQ9BXM9 530 aa19.44■□□□□ 0.7
PDLIM1-202ENST00000477757 SEMA3GQ9NS98 782 aa19.44■□□□□ 0.7
PDLIM1-202ENST00000477757 EURLQ9NYK6 297 aa19.44■□□□□ 0.7
PDLIM1-202ENST00000477757 OR6C2Q9NZP2 312 aa19.44■□□□□ 0.7
PDLIM1-202ENST00000477757 CHMP5Q9NZZ3 219 aa19.44■□□□□ 0.7
PDLIM1-202ENST00000477757 CTSFQ9UBX1 484 aa19.44■□□□□ 0.7
PDLIM1-202ENST00000477757 TRAV17A0A0B4J275 112 aa19.43■□□□□ 0.7
PDLIM1-202ENST00000477757 C2orf81A6NN90 581 aa19.43■□□□□ 0.7
PDLIM1-202ENST00000477757 HPP00738 406 aa19.43■□□□□ 0.7
PDLIM1-202ENST00000477757 CAPN3P20807 821 aa19.43■□□□□ 0.7
PDLIM1-202ENST00000477757 ARSFP54793 590 aa19.43■□□□□ 0.7
PDLIM1-202ENST00000477757 KRTAP10-9P60411 292 aa19.43■□□□□ 0.7
PDLIM1-202ENST00000477757 ZNF449Q6P9G9 518 aa19.43■□□□□ 0.7
PDLIM1-202ENST00000477757 XKRXQ6PP77 449 aa19.43■□□□□ 0.7
PDLIM1-202ENST00000477757 OR5AR1Q8NGP9 310 aa19.43■□□□□ 0.7
PDLIM1-202ENST00000477757 DENND1AQ8TEH3 1009 aa19.43■□□□□ 0.7
PDLIM1-202ENST00000477757 SOX17Q9H6I2 414 aaPredicted RBP19.43■□□□□ 0.7
PDLIM1-202ENST00000477757 KLHL8Q9P2G9 620 aaPredicted RBP19.43■□□□□ 0.7
PDLIM1-202ENST00000477757 IGLV3-16A0A075B6K0 115 aa19.42■□□□□ 0.7
PDLIM1-202ENST00000477757 DYTNA2CJ06 578 aa19.42■□□□□ 0.7
PDLIM1-202ENST00000477757 DSCR3O14972 297 aa19.42■□□□□ 0.7
PDLIM1-202ENST00000477757 USP1O94782 785 aa19.42■□□□□ 0.7
PDLIM1-202ENST00000477757 KRT1P04264 644 aa19.42■□□□□ 0.7
PDLIM1-202ENST00000477757 ITGALP20701 1170 aa19.42■□□□□ 0.7
PDLIM1-202ENST00000477757 AGAP20933 346 aa19.42■□□□□ 0.7
PDLIM1-202ENST00000477757 SOX11P35716 441 aa19.42■□□□□ 0.7
PDLIM1-202ENST00000477757 PBX1P40424 430 aa19.42■□□□□ 0.7
PDLIM1-202ENST00000477757 FANCCQ00597 558 aa19.42■□□□□ 0.7
PDLIM1-202ENST00000477757 SHISA6Q6ZSJ9 500 aa19.42■□□□□ 0.7
PDLIM1-202ENST00000477757 ZNF567Q8N184 647 aa19.42■□□□□ 0.7
PDLIM1-202ENST00000477757 LMBRD1Q9NUN5 540 aa19.42■□□□□ 0.7
PDLIM1-202ENST00000477757 ABI3Q9P2A4 366 aa19.42■□□□□ 0.7
PDLIM1-202ENST00000477757 SNRNP200O75643 2136 aaKnown RBP19.42■□□□□ 0.7
PDLIM1-202ENST00000477757 C5orf60A6NFR6 353 aa19.41■□□□□ 0.7
PDLIM1-202ENST00000477757 PRICKLE3O43900 615 aaPredicted RBP19.41■□□□□ 0.7
PDLIM1-202ENST00000477757 H2AFZP0C0S5 128 aa19.41■□□□□ 0.7
PDLIM1-202ENST00000477757 NR2C2P49116 596 aa19.41■□□□□ 0.7
PDLIM1-202ENST00000477757 H2AFVQ71UI9 128 aa19.41■□□□□ 0.7
PDLIM1-202ENST00000477757 BZW1Q7L1Q6 419 aaKnown RBP19.41■□□□□ 0.7
PDLIM1-202ENST00000477757 SNX20Q7Z614 316 aa19.41■□□□□ 0.7
PDLIM1-202ENST00000477757 FAM20CQ8IXL6 584 aa19.41■□□□□ 0.7
PDLIM1-202ENST00000477757 CTNNBL1Q8WYA6 563 aaPredicted RBP19.41■□□□□ 0.7
PDLIM1-202ENST00000477757 C14orf79Q96F83 325 aa19.41■□□□□ 0.7
PDLIM1-202ENST00000477757 NAP1L5Q96NT1 182 aaPredicted RBP19.41■□□□□ 0.7
PDLIM1-202ENST00000477757 VAT1Q99536 393 aa19.41■□□□□ 0.7
PDLIM1-202ENST00000477757 MESP1Q9BRJ9 268 aa19.41■□□□□ 0.7
PDLIM1-202ENST00000477757 ZNF160Q9HCG1 818 aa19.41■□□□□ 0.7
PDLIM1-202ENST00000477757 SAE1Q9UBE0 346 aaPredicted RBP19.41■□□□□ 0.7
PDLIM1-202ENST00000477757 SEC14L3Q9UDX4 400 aa19.41■□□□□ 0.7
PDLIM1-202ENST00000477757 SH3BGRL2Q9UJC5 107 aa19.41■□□□□ 0.7
PDLIM1-202ENST00000477757 NCOA6Q14686 2063 aaPredicted RBP19.4■□□□□ 0.7
PDLIM1-202ENST00000477757 VSTM2BA6NLU5 285 aa19.4■□□□□ 0.7
PDLIM1-202ENST00000477757 GSTM1P09488 218 aa19.4■□□□□ 0.7
PDLIM1-202ENST00000477757 TPBGLP0DKB5 382 aa19.4■□□□□ 0.7
PDLIM1-202ENST00000477757 ACPPP15309 386 aa19.4■□□□□ 0.7
PDLIM1-202ENST00000477757 PECAM1P16284 738 aaPredicted RBP19.4■□□□□ 0.7
PDLIM1-202ENST00000477757 MST1P26927 711 aa19.4■□□□□ 0.7
PDLIM1-202ENST00000477757 PEBP1P30086 187 aaKnown RBP19.4■□□□□ 0.7
PDLIM1-202ENST00000477757 ZNF140P52738 457 aaPredicted RBP19.4■□□□□ 0.7
PDLIM1-202ENST00000477757 ADORA2A-AS1P86434 159 aa19.4■□□□□ 0.7
PDLIM1-202ENST00000477757 GSTM4Q03013 218 aa19.4■□□□□ 0.7
PDLIM1-202ENST00000477757 MESDQ14696 234 aa19.4■□□□□ 0.7
PDLIM1-202ENST00000477757 KIR2DS3Q14952 304 aa19.4■□□□□ 0.7
PDLIM1-202ENST00000477757 ZDHHC19Q8WVZ1 309 aaPredicted RBP19.4■□□□□ 0.7
PDLIM1-202ENST00000477757 CRB3Q9BUF7 120 aa19.4■□□□□ 0.7
PDLIM1-202ENST00000477757 FAM96AQ9H5X1 160 aa19.4■□□□□ 0.7
PDLIM1-202ENST00000477757 ENAMQ9NRM1 1142 aa19.4■□□□□ 0.7
PDLIM1-202ENST00000477757 CUTCQ9NTM9 273 aa19.4■□□□□ 0.7
PDLIM1-202ENST00000477757 ZDHHC3Q9NYG2 299 aa19.4■□□□□ 0.7
PDLIM1-202ENST00000477757 POLG2Q9UHN1 485 aa19.4■□□□□ 0.7
PDLIM1-202ENST00000477757 ASF1AQ9Y294 204 aa19.4■□□□□ 0.7
PDLIM1-202ENST00000477757 C19orf84I3L1E1 186 aa19.39■□□□□ 0.69
PDLIM1-202ENST00000477757 AGTP01019 485 aa19.39■□□□□ 0.69
PDLIM1-202ENST00000477757 CRYABP02511 175 aaKnown RBP19.39■□□□□ 0.69
PDLIM1-202ENST00000477757 MAGP20916 626 aa19.39■□□□□ 0.69
PDLIM1-202ENST00000477757 LRRC38Q5VT99 294 aa19.39■□□□□ 0.69
PDLIM1-202ENST00000477757 YOD1Q5VVQ6 348 aaPredicted RBP19.39■□□□□ 0.69
PDLIM1-202ENST00000477757 NLRP9Q7RTR0 991 aa19.39■□□□□ 0.69
PDLIM1-202ENST00000477757 PID1Q7Z2X4 250 aa19.39■□□□□ 0.69
PDLIM1-202ENST00000477757 MCATQ8IVS2 390 aaKnown RBP19.39■□□□□ 0.69
PDLIM1-202ENST00000477757 KBTBD2Q8IY47 623 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms