RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 ATOH8Q96SQ7 321 aa9.56□□□□□ -0.88
CMC1-209ENST00000477739 PKMYT1Q99640 499 aa9.56□□□□□ -0.88
CMC1-209ENST00000477739 HIST1H2AJQ99878 128 aa9.56□□□□□ -0.88
CMC1-209ENST00000477739 H2AFJQ9BTM1 129 aa9.56□□□□□ -0.88
CMC1-209ENST00000477739 ASPSCR1Q9BZE9 553 aa9.56□□□□□ -0.88
CMC1-209ENST00000477739 LRTM1Q9HBL6 345 aa9.56□□□□□ -0.88
CMC1-209ENST00000477739 TMEM161AQ9NX61 479 aa9.56□□□□□ -0.88
CMC1-209ENST00000477739 IMPAD1Q9NX62 359 aa9.56□□□□□ -0.88
CMC1-209ENST00000477739 GPRC5BQ9NZH0 403 aa9.56□□□□□ -0.88
CMC1-209ENST00000477739 SLC22A14Q9Y267 594 aa9.56□□□□□ -0.88
CMC1-209ENST00000477739 DICER1Q9UPY3 1922 aaKnown RBP9.56□□□□□ -0.88
CMC1-209ENST00000477739 C2orf78A6NCI8 922 aa9.55□□□□□ -0.88
CMC1-209ENST00000477739 RAD51BO15315 384 aa9.55□□□□□ -0.88
CMC1-209ENST00000477739 CACNG3O60359 315 aa9.55□□□□□ -0.88
CMC1-209ENST00000477739 NDUFS2O75306 463 aa9.55□□□□□ -0.88
CMC1-209ENST00000477739 BCAS1O75363 584 aaPredicted RBP9.55□□□□□ -0.88
CMC1-209ENST00000477739 PGRP06401 933 aa9.55□□□□□ -0.88
CMC1-209ENST00000477739 XPAP23025 273 aaPredicted RBP9.55□□□□□ -0.88
CMC1-209ENST00000477739 IDUAP35475 653 aa9.55□□□□□ -0.88
CMC1-209ENST00000477739 TRAP1Q12931 704 aaKnown RBP9.55□□□□□ -0.88
CMC1-209ENST00000477739 SERINC3Q13530 473 aa9.55□□□□□ -0.88
CMC1-209ENST00000477739 NKG7Q16617 165 aa9.55□□□□□ -0.88
CMC1-209ENST00000477739 SPATC1Q76KD6 591 aa9.55□□□□□ -0.88
CMC1-209ENST00000477739 TMEM179BQ7Z7N9 219 aa9.55□□□□□ -0.88
CMC1-209ENST00000477739 TICAM1Q8IUC6 712 aa9.55□□□□□ -0.88
CMC1-209ENST00000477739 RGL4Q8IZJ4 473 aa9.55□□□□□ -0.88
CMC1-209ENST00000477739 TAGAPQ8N103 731 aa9.55□□□□□ -0.88
CMC1-209ENST00000477739 NCSTNQ92542 709 aa9.55□□□□□ -0.88
CMC1-209ENST00000477739 NELL1Q92832 810 aa9.55□□□□□ -0.88
CMC1-209ENST00000477739 TMEM203Q969S6 136 aa9.55□□□□□ -0.88
CMC1-209ENST00000477739 WBP2Q969T9 261 aa9.55□□□□□ -0.88
CMC1-209ENST00000477739 IL4I1Q96RQ9 567 aa9.55□□□□□ -0.88
CMC1-209ENST00000477739 TRMOQ9BU70 441 aa9.55□□□□□ -0.88
CMC1-209ENST00000477739 SDR39U1Q9NRG7 319 aaPredicted RBP9.55□□□□□ -0.88
CMC1-209ENST00000477739 SCN3BQ9NY72 215 aa9.55□□□□□ -0.88
CMC1-209ENST00000477739 MOSPD1Q9UJG1 213 aa9.55□□□□□ -0.88
CMC1-209ENST00000477739 SH3BP1Q9Y3L3 701 aa9.55□□□□□ -0.88
CMC1-209ENST00000477739 GPR45Q9Y5Y3 372 aa9.55□□□□□ -0.88
CMC1-209ENST00000477739 A0A096LPI6 279 aa9.55□□□□□ -0.88
CMC1-209ENST00000477739 MTMR11A4FU01 709 aa9.55□□□□□ -0.88
CMC1-209ENST00000477739 SLC35F4A4IF30 521 aa9.55□□□□□ -0.88
CMC1-209ENST00000477739 ASPDHA6ND91 283 aa9.55□□□□□ -0.88
CMC1-209ENST00000477739 AQP12BA6NM10 295 aa9.55□□□□□ -0.88
CMC1-209ENST00000477739 RASAL1O95294 804 aa9.55□□□□□ -0.88
CMC1-209ENST00000477739 MMP2P08253 660 aa9.55□□□□□ -0.88
CMC1-209ENST00000477739 HTR1BP28222 390 aa9.55□□□□□ -0.88
CMC1-209ENST00000477739 C21orf33P30042 268 aaPredicted RBP9.55□□□□□ -0.88
CMC1-209ENST00000477739 HOXC13P31276 330 aa9.55□□□□□ -0.88
CMC1-209ENST00000477739 ALDH7A1P49419 539 aaKnown RBP9.55□□□□□ -0.88
CMC1-209ENST00000477739 RNF144AP50876 292 aaPredicted RBP9.55□□□□□ -0.88
CMC1-209ENST00000477739 YBEYP58557 167 aaPredicted RBP9.55□□□□□ -0.88
CMC1-209ENST00000477739 NKX3-2P78367 333 aa9.55□□□□□ -0.88
CMC1-209ENST00000477739 RELAQ04206 551 aa9.55□□□□□ -0.88
CMC1-209ENST00000477739 SLC36A3Q495N2 470 aa9.55□□□□□ -0.88
CMC1-209ENST00000477739 TXNDC8Q6A555 127 aa9.55□□□□□ -0.88
CMC1-209ENST00000477739 PRMT9Q6P2P2 845 aa9.55□□□□□ -0.88
CMC1-209ENST00000477739 AFTPHQ6ULP2 937 aa9.55□□□□□ -0.88
CMC1-209ENST00000477739 AQP12AQ8IXF9 295 aa9.55□□□□□ -0.88
CMC1-209ENST00000477739 SCML4Q8N228 414 aa9.55□□□□□ -0.88
CMC1-209ENST00000477739 C10orf111Q8N326 155 aa9.55□□□□□ -0.88
CMC1-209ENST00000477739 ARL14EPQ8N8R7 260 aaPredicted RBP9.55□□□□□ -0.88
CMC1-209ENST00000477739 ABHD11Q8NFV4 315 aa9.55□□□□□ -0.88
CMC1-209ENST00000477739 OR4K1Q8NGD4 311 aa9.55□□□□□ -0.88
CMC1-209ENST00000477739 MCFD2Q8NI22 146 aa9.55□□□□□ -0.88
CMC1-209ENST00000477739 FAR1Q8WVX9 515 aa9.55□□□□□ -0.88
CMC1-209ENST00000477739 STON2Q8WXE9 905 aa9.55□□□□□ -0.88
CMC1-209ENST00000477739 SLC39A13Q96H72 371 aa9.55□□□□□ -0.88
CMC1-209ENST00000477739 RNF186Q9NXI6 227 aa9.55□□□□□ -0.88
CMC1-209ENST00000477739 DNMT3LQ9UJW3 386 aa9.55□□□□□ -0.88
CMC1-209ENST00000477739 PCTPQ9UKL6 214 aa9.55□□□□□ -0.88
CMC1-209ENST00000477739 ACSL6Q9UKU0 697 aa9.55□□□□□ -0.88
CMC1-209ENST00000477739 NEU3Q9UQ49 428 aa9.55□□□□□ -0.88
CMC1-209ENST00000477739 LOC100130705A0A1B0GUX0 176 aa9.55□□□□□ -0.88
CMC1-209ENST00000477739 OR6C75A6NL08 312 aa9.55□□□□□ -0.88
CMC1-209ENST00000477739 IFRD1O00458 451 aaPredicted RBP9.55□□□□□ -0.88
CMC1-209ENST00000477739 PRMT5O14744 637 aaPredicted RBP9.55□□□□□ -0.88
CMC1-209ENST00000477739 SYN3O14994 580 aa9.55□□□□□ -0.88
CMC1-209ENST00000477739 SMAD6O43541 496 aaKnown RBP9.55□□□□□ -0.88
CMC1-209ENST00000477739 GPIP06744 558 aa9.55□□□□□ -0.88
CMC1-209ENST00000477739 BMP2P12643 396 aa9.55□□□□□ -0.88
CMC1-209ENST00000477739 EPB42P16452 691 aa9.55□□□□□ -0.88
CMC1-209ENST00000477739 DNAJB13P59910 316 aa9.55□□□□□ -0.88
CMC1-209ENST00000477739 SP3Q02447 781 aa9.55□□□□□ -0.88
CMC1-209ENST00000477739 RFTN1Q14699 578 aaPredicted RBP9.55□□□□□ -0.88
CMC1-209ENST00000477739 PCBP2Q15366 365 aaKnown RBP eCLIP9.55□□□□□ -0.882e-6■■■■■ 49.7
CMC1-209ENST00000477739 RSBN1Q5VWQ0 802 aaPredicted RBP9.55□□□□□ -0.88
CMC1-209ENST00000477739 ADNP2Q6IQ32 1131 aa9.55□□□□□ -0.88
CMC1-209ENST00000477739 ANKFN1Q8N957 763 aa9.55□□□□□ -0.88
CMC1-209ENST00000477739 HM13Q8TCT9 377 aa9.55□□□□□ -0.88
CMC1-209ENST00000477739 KIAA1191Q96A73 305 aa9.55□□□□□ -0.88
CMC1-209ENST00000477739 ADGRE3Q9BY15 652 aa9.55□□□□□ -0.88
CMC1-209ENST00000477739 ABCB9Q9NP78 766 aa9.55□□□□□ -0.88
CMC1-209ENST00000477739 KRT84Q9NSB2 600 aa9.55□□□□□ -0.88
CMC1-209ENST00000477739 DLGAP4Q9Y2H0 992 aa9.55□□□□□ -0.88
CMC1-209ENST00000477739 TBC1D30Q9Y2I9 924 aa9.55□□□□□ -0.88
CMC1-209ENST00000477739 PRSS21Q9Y6M0 314 aa9.55□□□□□ -0.88
CMC1-209ENST00000477739 TYW5A2RUC4 315 aaKnown RBP9.54□□□□□ -0.88
CMC1-209ENST00000477739 ANKRD66B4E2M5 251 aa9.54□□□□□ -0.88
CMC1-209ENST00000477739 SOX14O95416 240 aa9.54□□□□□ -0.88
CMC1-209ENST00000477739 MT-ND2P03891 347 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms