RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 RGS18Q9NS28 235 aa12.42□□□□□ -0.42
RTFDC1-207ENST00000477573 TBC1D13Q9NVG8 400 aa12.42□□□□□ -0.42
RTFDC1-207ENST00000477573 INTS10Q9NVR2 710 aaKnown RBP12.42□□□□□ -0.42
RTFDC1-207ENST00000477573 ANKRD6Q9Y2G4 727 aa12.42□□□□□ -0.42
RTFDC1-207ENST00000477573 KCNK7Q9Y2U2 307 aa12.42□□□□□ -0.42
RTFDC1-207ENST00000477573 ATP6AP2A0A1C7CYW4 349 aa12.41□□□□□ -0.42
RTFDC1-207ENST00000477573 TMEM82A0PJX8 343 aa12.41□□□□□ -0.42
RTFDC1-207ENST00000477573 CLDN24A6NM45 220 aa12.41□□□□□ -0.42
RTFDC1-207ENST00000477573 LRCH4O75427 683 aa12.41□□□□□ -0.42
RTFDC1-207ENST00000477573 CNTN5O94779 1100 aa12.41□□□□□ -0.42
RTFDC1-207ENST00000477573 HTR3BO95264 441 aa12.41□□□□□ -0.42
RTFDC1-207ENST00000477573 HBQ1P09105 142 aa12.41□□□□□ -0.42
RTFDC1-207ENST00000477573 ZSCAN5DPP0CG00 497 aa12.41□□□□□ -0.42
RTFDC1-207ENST00000477573 VAMP1P23763 118 aa12.41□□□□□ -0.42
RTFDC1-207ENST00000477573 CST5P28325 142 aaPredicted RBP12.41□□□□□ -0.42
RTFDC1-207ENST00000477573 GSTM5P46439 218 aa12.41□□□□□ -0.42
RTFDC1-207ENST00000477573 POU3F4P49335 361 aa12.41□□□□□ -0.42
RTFDC1-207ENST00000477573 SERPINB9P50453 376 aa12.41□□□□□ -0.42
RTFDC1-207ENST00000477573 ARFIP1P53367 373 aa12.41□□□□□ -0.42
RTFDC1-207ENST00000477573 KCNA10Q16322 511 aa12.41□□□□□ -0.42
RTFDC1-207ENST00000477573 HKDC1Q2TB90 917 aa12.41□□□□□ -0.42
RTFDC1-207ENST00000477573 TFDP3Q5H9I0 405 aa12.41□□□□□ -0.42
RTFDC1-207ENST00000477573 OR6B2Q6IFH4 312 aa12.41□□□□□ -0.42
RTFDC1-207ENST00000477573 SPOCD1Q6ZMY3 1216 aa12.41□□□□□ -0.42
RTFDC1-207ENST00000477573 C8orf59Q8N0T1 100 aaPredicted RBP12.41□□□□□ -0.42
RTFDC1-207ENST00000477573 KLHDC9Q8NEP7 349 aa12.41□□□□□ -0.42
RTFDC1-207ENST00000477573 JOSD2Q8TAC2 188 aa12.41□□□□□ -0.42
RTFDC1-207ENST00000477573 RDH12Q96NR8 316 aa12.41□□□□□ -0.42
RTFDC1-207ENST00000477573 OR2A14Q96R47 310 aa12.41□□□□□ -0.42
RTFDC1-207ENST00000477573 FAM118BQ9BPY3 351 aa12.41□□□□□ -0.42
RTFDC1-207ENST00000477573 SPAG4Q9NPE6 437 aa12.41□□□□□ -0.42
RTFDC1-207ENST00000477573 GSN-AS1Q9NRJ2 163 aa12.41□□□□□ -0.42
RTFDC1-207ENST00000477573 TMLHEQ9NVH6 421 aa12.41□□□□□ -0.42
RTFDC1-207ENST00000477573 CBY1Q9Y3M2 126 aa12.41□□□□□ -0.42
RTFDC1-207ENST00000477573 PCNTO95613 3336 aa12.41□□□□□ -0.42
RTFDC1-207ENST00000477573 FAM170BA6NMN3 283 aa12.4□□□□□ -0.42
RTFDC1-207ENST00000477573 KRBOX1C9JBD0 128 aa12.4□□□□□ -0.42
RTFDC1-207ENST00000477573 H3BQ06 376 aaPredicted RBP12.4□□□□□ -0.42
RTFDC1-207ENST00000477573 GLRA3O75311 464 aa12.4□□□□□ -0.42
RTFDC1-207ENST00000477573 CABYRO75952 493 aa12.4□□□□□ -0.42
RTFDC1-207ENST00000477573 AHSGP02765 367 aa12.4□□□□□ -0.42
RTFDC1-207ENST00000477573 C2P06681 752 aa12.4□□□□□ -0.42
RTFDC1-207ENST00000477573 CTSHP09668 335 aa12.4□□□□□ -0.42
RTFDC1-207ENST00000477573 CNTFP26441 200 aa12.4□□□□□ -0.42
RTFDC1-207ENST00000477573 NUP62P37198 522 aaPredicted RBP12.4□□□□□ -0.42
RTFDC1-207ENST00000477573 ASMTP46597 345 aa12.4□□□□□ -0.42
RTFDC1-207ENST00000477573 CCT3P49368 545 aaKnown RBP12.4□□□□□ -0.42
RTFDC1-207ENST00000477573 ZNF143P52747 638 aaPredicted RBP12.4□□□□□ -0.42
RTFDC1-207ENST00000477573 PSMD4P55036 377 aaKnown RBP12.4□□□□□ -0.42
RTFDC1-207ENST00000477573 RAB25P57735 213 aa12.4□□□□□ -0.42
RTFDC1-207ENST00000477573 SLC9B1Q4ZJI4 515 aa12.4□□□□□ -0.42
RTFDC1-207ENST00000477573 SPANXN2Q5MJ10 180 aa12.4□□□□□ -0.42
RTFDC1-207ENST00000477573 PYHIN1Q6K0P9 492 aa12.4□□□□□ -0.42
RTFDC1-207ENST00000477573 UNC5BQ8IZJ1 945 aa12.4□□□□□ -0.42
RTFDC1-207ENST00000477573 CRYBG2Q8N1P7 616 aa12.4□□□□□ -0.42
RTFDC1-207ENST00000477573 TOP6BLQ8N6T0 577 aa12.4□□□□□ -0.42
RTFDC1-207ENST00000477573 GDPD1Q8N9F7 314 aa12.4□□□□□ -0.42
RTFDC1-207ENST00000477573 FAR1Q8WVX9 515 aa12.4□□□□□ -0.42
RTFDC1-207ENST00000477573 CPT1BQ92523 772 aa12.4□□□□□ -0.42
RTFDC1-207ENST00000477573 KAT8Q9H7Z6 458 aaKnown RBP12.4□□□□□ -0.42
RTFDC1-207ENST00000477573 TJP2Q9UDY2 1190 aa12.4□□□□□ -0.42
RTFDC1-207ENST00000477573 TBC1D24Q9ULP9 559 aa12.4□□□□□ -0.42
RTFDC1-207ENST00000477573 INVSQ9Y283 1065 aa12.4□□□□□ -0.42
RTFDC1-207ENST00000477573 DHRS12A0PJE2 317 aa12.4□□□□□ -0.42
RTFDC1-207ENST00000477573 TCAF2A6NFQ2 919 aa12.4□□□□□ -0.42
RTFDC1-207ENST00000477573 SLC9B1P1A6NJY1 282 aa12.4□□□□□ -0.42
RTFDC1-207ENST00000477573 STMND1H3BQB6 276 aa12.4□□□□□ -0.42
RTFDC1-207ENST00000477573 SSX4O60224 188 aa12.4□□□□□ -0.42
RTFDC1-207ENST00000477573 TNFRSF21O75509 655 aa12.4□□□□□ -0.42
RTFDC1-207ENST00000477573 IFNA4P05014 189 aa12.4□□□□□ -0.42
RTFDC1-207ENST00000477573 SMIM6P0DI80 62 aa12.4□□□□□ -0.42
RTFDC1-207ENST00000477573 GPD1P21695 349 aa12.4□□□□□ -0.42
RTFDC1-207ENST00000477573 BCAT1P54687 386 aa12.4□□□□□ -0.42
RTFDC1-207ENST00000477573 LILRA4P59901 499 aa12.4□□□□□ -0.42
RTFDC1-207ENST00000477573 DEFB115Q30KQ5 88 aa12.4□□□□□ -0.42
RTFDC1-207ENST00000477573 ATP13A4Q4VNC1 1196 aa12.4□□□□□ -0.42
RTFDC1-207ENST00000477573 PKDCCQ504Y2 493 aa12.4□□□□□ -0.42
RTFDC1-207ENST00000477573 C6orf141Q5SZD1 244 aa12.4□□□□□ -0.42
RTFDC1-207ENST00000477573 SYT6Q5T7P8 510 aaPredicted RBP12.4□□□□□ -0.42
RTFDC1-207ENST00000477573 MFSD7Q6UXD7 560 aa12.4□□□□□ -0.42
RTFDC1-207ENST00000477573 USP45Q70EL2 814 aa12.4□□□□□ -0.42
RTFDC1-207ENST00000477573 OVCH2Q7RTZ1 564 aa12.4□□□□□ -0.42
RTFDC1-207ENST00000477573 MAMDC2Q7Z304 686 aaPredicted RBP12.4□□□□□ -0.42
RTFDC1-207ENST00000477573 ADGRG2Q8IZP9 1017 aa12.4□□□□□ -0.42
RTFDC1-207ENST00000477573 ATG16L2Q8NAA4 619 aa12.4□□□□□ -0.42
RTFDC1-207ENST00000477573 SLC37A3Q8NCC5 494 aa12.4□□□□□ -0.42
RTFDC1-207ENST00000477573 TRPV3Q8NET8 790 aa12.4□□□□□ -0.42
RTFDC1-207ENST00000477573 SIPA1Q96FS4 1042 aa12.4□□□□□ -0.42
RTFDC1-207ENST00000477573 GAD1Q99259 594 aa12.4□□□□□ -0.42
RTFDC1-207ENST00000477573 FRMD8P1Q9BZ68 369 aaPredicted RBP12.4□□□□□ -0.42
RTFDC1-207ENST00000477573 FAM49BQ9NUQ9 324 aa12.4□□□□□ -0.42
RTFDC1-207ENST00000477573 POLG2Q9UHN1 485 aa12.4□□□□□ -0.42
RTFDC1-207ENST00000477573 GPN3Q9UHW5 284 aaPredicted RBP12.4□□□□□ -0.42
RTFDC1-207ENST00000477573 RPS6KA6Q9UK32 745 aa12.4□□□□□ -0.42
RTFDC1-207ENST00000477573 SNX6Q9UNH7 406 aa12.4□□□□□ -0.42
RTFDC1-207ENST00000477573 NOD1Q9Y239 953 aa12.4□□□□□ -0.42
RTFDC1-207ENST00000477573 SESN1Q9Y6P5 492 aa12.4□□□□□ -0.42
RTFDC1-207ENST00000477573 RPS10-NUDT3A0A1W2PQS6 291 aa12.39□□□□□ -0.43
RTFDC1-207ENST00000477573 E2F8A0AVK6 867 aa12.39□□□□□ -0.43
RTFDC1-207ENST00000477573 RFPL3O75679 317 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms