RNA–Protein interactions for RNA: ENST00000477528.5

HDAC6-220, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 4,832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-220ENST00000477528 LINGO3P0C6S8 592 aa14.31□□□□□ -0.12
HDAC6-220ENST00000477528 UGT2B15P54855 530 aa14.31□□□□□ -0.12
HDAC6-220ENST00000477528 RPS7P62081 194 aaKnown RBP14.31□□□□□ -0.12
HDAC6-220ENST00000477528 CREB5Q02930 508 aa14.31□□□□□ -0.12
HDAC6-220ENST00000477528 ARMCX4Q5H9R4 360 aa14.31□□□□□ -0.12
HDAC6-220ENST00000477528 SPANXN2Q5MJ10 180 aa14.31□□□□□ -0.12
HDAC6-220ENST00000477528 GPRC6AQ5T6X5 926 aa14.31□□□□□ -0.12
HDAC6-220ENST00000477528 BNIPLQ7Z465 357 aa14.31□□□□□ -0.12
HDAC6-220ENST00000477528 PHC3Q8NDX5 983 aa14.31□□□□□ -0.12
HDAC6-220ENST00000477528 S100ZQ8WXG8 99 aa14.31□□□□□ -0.12
HDAC6-220ENST00000477528 FUBP1Q96AE4 644 aaKnown RBP14.31□□□□□ -0.12
HDAC6-220ENST00000477528 RAD51AP1Q96B01 352 aa14.31□□□□□ -0.12
HDAC6-220ENST00000477528 PHPT1Q9NRX4 125 aaPredicted RBP14.31□□□□□ -0.12
HDAC6-220ENST00000477528 TRPS1Q9UHF7 1281 aa14.31□□□□□ -0.12
HDAC6-220ENST00000477528 NME7Q9Y5B8 376 aa14.31□□□□□ -0.12
HDAC6-220ENST00000477528 H0Y858 1186 aa14.31□□□□□ -0.12
HDAC6-220ENST00000477528 hCG_2039718K7EN88 272 aa14.31□□□□□ -0.12
HDAC6-220ENST00000477528 NOBOXO60393 691 aa14.31□□□□□ -0.12
HDAC6-220ENST00000477528 EPHX1P07099 455 aa14.31□□□□□ -0.12
HDAC6-220ENST00000477528 PSMD8P48556 350 aa14.31□□□□□ -0.12
HDAC6-220ENST00000477528 CYP4F2P78329 520 aa14.31□□□□□ -0.12
HDAC6-220ENST00000477528 KLHDC10Q6PID8 442 aa14.31□□□□□ -0.12
HDAC6-220ENST00000477528 ARRDC2Q8TBH0 407 aa14.31□□□□□ -0.12
HDAC6-220ENST00000477528 ISL2Q96A47 359 aa14.31□□□□□ -0.12
HDAC6-220ENST00000477528 SLC7A5P2Q9GIP4 190 aa14.31□□□□□ -0.12
HDAC6-220ENST00000477528 H0YJX3 145 aa14.31□□□□□ -0.12
HDAC6-220ENST00000477528 OR10H3O60404 316 aa14.31□□□□□ -0.12
HDAC6-220ENST00000477528 ERAL1O75616 437 aaKnown RBP14.31□□□□□ -0.12
HDAC6-220ENST00000477528 SSR2P43308 183 aa14.31□□□□□ -0.12
HDAC6-220ENST00000477528 INHBCP55103 352 aa14.31□□□□□ -0.12
HDAC6-220ENST00000477528 TUBA4AP68366 448 aa14.31□□□□□ -0.12
HDAC6-220ENST00000477528 CPA6Q8N4T0 437 aa14.31□□□□□ -0.12
HDAC6-220ENST00000477528 PNPLA1Q8N8W4 532 aa14.31□□□□□ -0.12
HDAC6-220ENST00000477528 GOLM1Q8NBJ4 401 aa14.31□□□□□ -0.12
HDAC6-220ENST00000477528 KBTBD8Q8NFY9 601 aa14.31□□□□□ -0.12
HDAC6-220ENST00000477528 PRICKLE1Q96MT3 831 aaPredicted RBP14.31□□□□□ -0.12
HDAC6-220ENST00000477528 ZNF641Q96N77 438 aaPredicted RBP14.31□□□□□ -0.12
HDAC6-220ENST00000477528 TEFMQ96QE5 360 aaKnown RBP14.31□□□□□ -0.12
HDAC6-220ENST00000477528 TDP1Q9NUW8 608 aa14.31□□□□□ -0.12
HDAC6-220ENST00000477528 GULP1Q9UBP9 304 aa14.31□□□□□ -0.12
HDAC6-220ENST00000477528 B4GALT6Q9UBX8 382 aa14.31□□□□□ -0.12
HDAC6-220ENST00000477528 PTBP2Q9UKA9 531 aaKnown RBP14.31□□□□□ -0.12
HDAC6-220ENST00000477528 SSC5DA1L4H1 1573 aa14.3□□□□□ -0.12
HDAC6-220ENST00000477528 UPK3BL1B0FP48 263 aa14.3□□□□□ -0.12
HDAC6-220ENST00000477528 UPK3BL2E5RIL1 263 aa14.3□□□□□ -0.12
HDAC6-220ENST00000477528 PI15O43692 258 aa14.3□□□□□ -0.12
HDAC6-220ENST00000477528 EEDO75530 441 aaKnown RBP14.3□□□□□ -0.12
HDAC6-220ENST00000477528 SEC24AO95486 1093 aa14.3□□□□□ -0.12
HDAC6-220ENST00000477528 PRSS56P0CW18 603 aa14.3□□□□□ -0.12
HDAC6-220ENST00000477528 ACRV1P26436 265 aa14.3□□□□□ -0.12
HDAC6-220ENST00000477528 HOXC13P31276 330 aa14.3□□□□□ -0.12
HDAC6-220ENST00000477528 LMAN2Q12907 356 aa14.3□□□□□ -0.12
HDAC6-220ENST00000477528 MAPK11Q15759 364 aa14.3□□□□□ -0.12
HDAC6-220ENST00000477528 USP39Q53GS9 565 aaKnown RBP14.3□□□□□ -0.12
HDAC6-220ENST00000477528 PDPRQ8NCN5 879 aa14.3□□□□□ -0.12
HDAC6-220ENST00000477528 TRPV1Q8NER1 839 aa14.3□□□□□ -0.12
HDAC6-220ENST00000477528 RASSF1Q9NS23 344 aa14.3□□□□□ -0.12
HDAC6-220ENST00000477528 CLIC1O00299 241 aa14.3□□□□□ -0.12
HDAC6-220ENST00000477528 DENRO43583 198 aaKnown RBP14.3□□□□□ -0.12
HDAC6-220ENST00000477528 CCL5P13501 91 aa14.3□□□□□ -0.12
HDAC6-220ENST00000477528 GSTM5P46439 218 aa14.3□□□□□ -0.12
HDAC6-220ENST00000477528 RFTN2Q52LD8 501 aaPredicted RBP14.3□□□□□ -0.12
HDAC6-220ENST00000477528 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.3□□□□□ -0.12
HDAC6-220ENST00000477528 OR8H2Q8N162 312 aa14.3□□□□□ -0.12
HDAC6-220ENST00000477528 C2orf73Q8N5S3 287 aaPredicted RBP14.3□□□□□ -0.12
HDAC6-220ENST00000477528 RTP3Q9BQQ7 232 aa14.3□□□□□ -0.12
HDAC6-220ENST00000477528 EFCAB11Q9BUY7 163 aa14.3□□□□□ -0.12
HDAC6-220ENST00000477528 OR2AG1Q9H205 316 aa14.3□□□□□ -0.12
HDAC6-220ENST00000477528 EPB41L1Q9H4G0 881 aa14.3□□□□□ -0.12
HDAC6-220ENST00000477528 IMP3Q9NV31 184 aaKnown RBP14.3□□□□□ -0.12
HDAC6-220ENST00000477528 PCTPQ9UKL6 214 aa14.3□□□□□ -0.12
HDAC6-220ENST00000477528 PCDHGA7Q9Y5G6 932 aa14.3□□□□□ -0.12
HDAC6-220ENST00000477528 NRXN2Q9P2S2 1712 aa14.3□□□□□ -0.12
HDAC6-220ENST00000477528 EFCAB10A6NFE3 127 aa14.3□□□□□ -0.12
HDAC6-220ENST00000477528 SLC28A2O43868 658 aa14.3□□□□□ -0.12
HDAC6-220ENST00000477528 TLX1P31314 330 aaPredicted RBP14.3□□□□□ -0.12
HDAC6-220ENST00000477528 TLR1Q15399 786 aa14.3□□□□□ -0.12
HDAC6-220ENST00000477528 SKIV2LQ15477 1246 aaKnown RBP14.3□□□□□ -0.12
HDAC6-220ENST00000477528 OR4F3Q6IEY1 312 aa14.3□□□□□ -0.12
HDAC6-220ENST00000477528 DPF3Q92784 378 aa14.3□□□□□ -0.12
HDAC6-220ENST00000477528 CMTM7Q96FZ5 175 aa14.3□□□□□ -0.12
HDAC6-220ENST00000477528 CCM2Q9BSQ5 444 aa14.3□□□□□ -0.12
HDAC6-220ENST00000477528 CDV3Q9UKY7 258 aaKnown RBP14.3□□□□□ -0.12
HDAC6-220ENST00000477528 CNOT11Q9UKZ1 510 aaKnown RBP14.3□□□□□ -0.12
HDAC6-220ENST00000477528 MAP4K5Q9Y4K4 846 aa14.3□□□□□ -0.12
HDAC6-220ENST00000477528 FGF18O76093 207 aa14.3□□□□□ -0.12
HDAC6-220ENST00000477528 SORBS2O94875 1100 aaKnown RBP14.3□□□□□ -0.12
HDAC6-220ENST00000477528 MATN4O95460 622 aa14.3□□□□□ -0.12
HDAC6-220ENST00000477528 GABRB3P28472 473 aa14.3□□□□□ -0.12
HDAC6-220ENST00000477528 INAQ16352 499 aa14.3□□□□□ -0.12
HDAC6-220ENST00000477528 OTUD1Q5VV17 481 aaPredicted RBP14.3□□□□□ -0.12
HDAC6-220ENST00000477528 CES5AQ6NT32 575 aa14.3□□□□□ -0.12
HDAC6-220ENST00000477528 OR8J3Q8NGG0 315 aa14.3□□□□□ -0.12
HDAC6-220ENST00000477528 NUAK2Q9H093 628 aa14.3□□□□□ -0.12
HDAC6-220ENST00000477528 ITM2CQ9NQX7 267 aa14.3□□□□□ -0.12
HDAC6-220ENST00000477528 PRORSD1PA6NEY8 169 aa14.29□□□□□ -0.12
HDAC6-220ENST00000477528 PCDH7O60245 1069 aa14.29□□□□□ -0.12
HDAC6-220ENST00000477528 ZBTB11O95625 1053 aaPredicted RBP14.29□□□□□ -0.12
HDAC6-220ENST00000477528 GGT5P36269 586 aa14.29□□□□□ -0.12
HDAC6-220ENST00000477528 ABHD18Q0P651 414 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms