RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-212ENST00000477520 RHOBTB1O94844 696 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 IL18RAPO95256 599 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 GOT2P00505 430 aaKnown RBP4.62□□□□□ -1.67
PTCD3-212ENST00000477520 IFNA7P01567 189 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 ALPPP05187 535 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 THBDP07204 575 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 RETP07949 1114 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 DBTP11182 482 aaKnown RBP4.62□□□□□ -1.67
PTCD3-212ENST00000477520 TCF4P15884 667 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 ZNF30P17039 623 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 CKMT2P17540 419 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 PSMA3P25788 255 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 RFC2P35250 354 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 SOX6P35712 828 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 ELK3P41970 407 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 SLC15A1P46059 708 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 ALDH3A2P51648 485 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 KPNA2P52292 529 aaKnown RBP4.62□□□□□ -1.67
PTCD3-212ENST00000477520 CDH13P55290 713 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 BACE1P56817 501 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 RAB14P61106 215 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 ERVK-21P61565 698 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 POU6F2P78424 691 aaPredicted RBP4.62□□□□□ -1.67
PTCD3-212ENST00000477520 SPP2Q13103 211 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 HNRNPA0Q13151 305 aaKnown RBP4.62□□□□□ -1.67
PTCD3-212ENST00000477520 NOGQ13253 232 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 GPR50Q13585 617 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 TFDP2Q14188 446 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 DPYSL3Q14195 570 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 GRK1Q15835 563 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 TAZQ16635 292 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 COL28A1Q2UY09 1125 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 DEFB115Q30KQ5 88 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 TIMM50Q3ZCQ8 353 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 Q3ZCU0 254 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 PARP15Q460N3 678 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 ASPRV1Q53RT3 343 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 FAM76BQ5HYJ3 339 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 TOR2AQ5JU69 321 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 C6orf141Q5SZD1 244 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 FNBP1LQ5T0N5 605 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 GPATCH4Q5T3I0 446 aaKnown RBP4.62□□□□□ -1.67
PTCD3-212ENST00000477520 STEAP3Q658P3 488 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 ELP2Q6IA86 826 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 DENND5AQ6IQ26 1287 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 TIGD7Q6NT04 549 aaPredicted RBP4.62□□□□□ -1.67
PTCD3-212ENST00000477520 C8orf82Q6P1X6 216 aaPredicted RBP4.62□□□□□ -1.67
PTCD3-212ENST00000477520 GJB7Q6PEY0 223 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 CDHR3Q6ZTQ4 885 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 MOB2Q70IA6 237 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 RRM2BQ7LG56 351 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 CATSPER4Q7RTX7 472 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 PAGE2Q7Z2X7 111 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 KCNK18Q7Z418 384 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 AMIGO1Q86WK6 493 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 DDIASQ8IXT1 998 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 CPNE9Q8IYJ1 553 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 CHPFQ8IZ52 775 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 LRRC47Q8N1G4 583 aaKnown RBP4.62□□□□□ -1.67
PTCD3-212ENST00000477520 METTL4Q8N3J2 472 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 CADM2Q8N3J6 435 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 MPP5Q8N3R9 675 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 LILRB2Q8N423 598 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 SVOPLQ8N434 492 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 MINDY1Q8N5J2 469 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 XXYLT1Q8NBI6 393 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 GMCL1P1Q8NEA9 526 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 SLC7A14Q8TBB6 771 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 CHURC1Q8WUH1 139 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 DCAF4Q8WV16 495 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 KCTD4Q8WVF5 259 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 CYGBQ8WWM9 190 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 IPCEF1Q8WWN9 437 aaPredicted RBP4.62□□□□□ -1.67
PTCD3-212ENST00000477520 SLC7A6Q92536 515 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 SLC9A6Q92581 669 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 HTRA1Q92743 480 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 PTP4A1Q93096 173 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 RNF34Q969K3 372 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 C18orf25Q96B23 403 aaPredicted RBP4.62□□□□□ -1.67
PTCD3-212ENST00000477520 RCN3Q96D15 328 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 RTP4Q96DX8 246 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 YIPF6Q96EC8 236 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 ZNF503Q96F45 646 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 RNF170Q96K19 258 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 SCYL1Q96KG9 808 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 NT5C1BQ96P26 610 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 PCDHB18PQ96TA0 734 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 CSF3RQ99062 836 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 MNTQ99583 582 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 HTATIP2Q9BUP3 242 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 ZNF518BQ9C0D4 1074 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 SLIRPQ9GZT3 109 aaKnown RBP4.62□□□□□ -1.67
PTCD3-212ENST00000477520 IL22Q9GZX6 179 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 RIOX1Q9H6W3 641 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 GAREM1Q9H706 876 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 IFT46Q9NQC8 304 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 CHST12Q9NRB3 414 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 PCDHB16Q9NRJ7 776 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 ABCB10Q9NRK6 738 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 IL17RBQ9NRM6 502 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms