RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 MFSD4AQ8N468 514 aa7.08□□□□□ -1.28
BRCA1-214ENST00000477152 PLD5Q8N7P1 536 aa7.08□□□□□ -1.28
BRCA1-214ENST00000477152 CNTD1Q8N815 330 aa7.08□□□□□ -1.28
BRCA1-214ENST00000477152 SLC35G2Q8TBE7 412 aa7.08□□□□□ -1.28
BRCA1-214ENST00000477152 CT55Q8WUE5 264 aa7.08□□□□□ -1.28
BRCA1-214ENST00000477152 RAPGEF5Q92565 580 aa7.08□□□□□ -1.28
BRCA1-214ENST00000477152 N4BP2L2Q92802 583 aaPredicted RBP7.08□□□□□ -1.28
BRCA1-214ENST00000477152 MR1Q95460 341 aa7.08□□□□□ -1.28
BRCA1-214ENST00000477152 HAUS1Q96CS2 278 aa7.08□□□□□ -1.28
BRCA1-214ENST00000477152 RCC1LQ96I51 464 aaKnown RBP7.08□□□□□ -1.28
BRCA1-214ENST00000477152 SLC41A2Q96JW4 573 aa7.08□□□□□ -1.28
BRCA1-214ENST00000477152 LRFN5Q96NI6 719 aa7.08□□□□□ -1.28
BRCA1-214ENST00000477152 SMIM14Q96QK8 99 aa7.08□□□□□ -1.28
BRCA1-214ENST00000477152 ACTL8Q9H568 366 aa7.08□□□□□ -1.28
BRCA1-214ENST00000477152 ARFGAP3Q9NP61 516 aa7.08□□□□□ -1.28
BRCA1-214ENST00000477152 HRASLS2Q9NWW9 162 aa7.08□□□□□ -1.28
BRCA1-214ENST00000477152 SEMA5BQ9P283 1151 aa7.08□□□□□ -1.28
BRCA1-214ENST00000477152 TRIM10Q9UDY6 481 aa7.08□□□□□ -1.28
BRCA1-214ENST00000477152 SERTAD3Q9UJW9 196 aa7.08□□□□□ -1.28
BRCA1-214ENST00000477152 TLK1Q9UKI8 766 aa7.08□□□□□ -1.28
BRCA1-214ENST00000477152 INTUQ9ULD6 942 aa7.08□□□□□ -1.28
BRCA1-214ENST00000477152 SPTA1P02549 2419 aa7.07□□□□□ -1.28
BRCA1-214ENST00000477152 LOC285095A0A1B0GVY8 99 aa7.07□□□□□ -1.28
BRCA1-214ENST00000477152 OR5K3A6NET4 321 aa7.07□□□□□ -1.28
BRCA1-214ENST00000477152 MGAT4DA6NG13 374 aa7.07□□□□□ -1.28
BRCA1-214ENST00000477152 OR52A4PA6NMU1 304 aa7.07□□□□□ -1.28
BRCA1-214ENST00000477152 C9J4A7 227 aa7.07□□□□□ -1.28
BRCA1-214ENST00000477152 IFRD1O00458 451 aaPredicted RBP7.07□□□□□ -1.28
BRCA1-214ENST00000477152 PSTPIP1O43586 416 aa7.07□□□□□ -1.28
BRCA1-214ENST00000477152 CRTAMO95727 393 aa7.07□□□□□ -1.28
BRCA1-214ENST00000477152 DDAH2O95865 285 aa7.07□□□□□ -1.28
BRCA1-214ENST00000477152 GSTM1P09488 218 aa7.07□□□□□ -1.28
BRCA1-214ENST00000477152 PIRTP0C851 137 aa7.07□□□□□ -1.28
BRCA1-214ENST00000477152 NAT2P11245 290 aa7.07□□□□□ -1.28
BRCA1-214ENST00000477152 MTHFD1P11586 935 aaKnown RBP7.07□□□□□ -1.28
BRCA1-214ENST00000477152 PBX1P40424 430 aa7.07□□□□□ -1.28
BRCA1-214ENST00000477152 WNT3AP56704 352 aa7.07□□□□□ -1.28
BRCA1-214ENST00000477152 RPE65Q16518 533 aa7.07□□□□□ -1.28
BRCA1-214ENST00000477152 NKPD1Q17RQ9 610 aa7.07□□□□□ -1.28
BRCA1-214ENST00000477152 ATP13A5Q4VNC0 1218 aa7.07□□□□□ -1.28
BRCA1-214ENST00000477152 ZNF648Q5T619 568 aaPredicted RBP7.07□□□□□ -1.28
BRCA1-214ENST00000477152 CCDC181Q5TID7 509 aa7.07□□□□□ -1.28
BRCA1-214ENST00000477152 MED25Q71SY5 747 aa7.07□□□□□ -1.28
BRCA1-214ENST00000477152 RAB43Q86YS6 212 aa7.07□□□□□ -1.28
BRCA1-214ENST00000477152 D2HGDHQ8N465 521 aa7.07□□□□□ -1.28
BRCA1-214ENST00000477152 DDHD1Q8NEL9 900 aa7.07□□□□□ -1.28
BRCA1-214ENST00000477152 GIMAP7Q8NHV1 300 aa7.07□□□□□ -1.28
BRCA1-214ENST00000477152 ZNF398Q8TD17 642 aa7.07□□□□□ -1.28
BRCA1-214ENST00000477152 BLOC1S5Q8TDH9 187 aa7.07□□□□□ -1.28
BRCA1-214ENST00000477152 RSC1A1Q92681 617 aa7.07□□□□□ -1.28
BRCA1-214ENST00000477152 CLIP3Q96DZ5 547 aa7.07□□□□□ -1.28
BRCA1-214ENST00000477152 RBM41Q96IZ5 413 aaKnown RBP7.07□□□□□ -1.28
BRCA1-214ENST00000477152 VPS50Q96JG6 964 aa7.07□□□□□ -1.28
BRCA1-214ENST00000477152 C12orf66Q96MD2 445 aa7.07□□□□□ -1.28
BRCA1-214ENST00000477152 OLFM3Q96PB7 478 aa7.07□□□□□ -1.28
BRCA1-214ENST00000477152 FCRL5Q96RD9 977 aa7.07□□□□□ -1.28
BRCA1-214ENST00000477152 C19orf43Q9BQ61 176 aa7.07□□□□□ -1.28
BRCA1-214ENST00000477152 DHRS4Q9BTZ2 278 aa7.07□□□□□ -1.28
BRCA1-214ENST00000477152 BPIFA1Q9NP55 256 aa7.07□□□□□ -1.28
BRCA1-214ENST00000477152 SLAMF7Q9NQ25 335 aa7.07□□□□□ -1.28
BRCA1-214ENST00000477152 IMP3Q9NV31 184 aaKnown RBP7.07□□□□□ -1.28
BRCA1-214ENST00000477152 SMOXQ9NWM0 555 aa7.07□□□□□ -1.28
BRCA1-214ENST00000477152 IFNKQ9P0W0 207 aa7.07□□□□□ -1.28
BRCA1-214ENST00000477152 SLC23A2Q9UGH3 650 aa7.07□□□□□ -1.28
BRCA1-214ENST00000477152 FEZ2Q9UHY8 353 aaPredicted RBP7.07□□□□□ -1.28
BRCA1-214ENST00000477152 SNX7Q9UNH6 387 aa7.07□□□□□ -1.28
BRCA1-214ENST00000477152 AAR2Q9Y312 384 aaKnown RBP7.07□□□□□ -1.28
BRCA1-214ENST00000477152 MRPS18BQ9Y676 258 aaKnown RBP7.07□□□□□ -1.28
BRCA1-214ENST00000477152 SMG1Q96Q15 3661 aaKnown RBP7.07□□□□□ -1.28
BRCA1-214ENST00000477152 TRBV23-1A0A0A0MS06 115 aa7.06□□□□□ -1.28
BRCA1-214ENST00000477152 C5orf60A6NFR6 353 aa7.06□□□□□ -1.28
BRCA1-214ENST00000477152 MTX2O75431 263 aa7.06□□□□□ -1.28
BRCA1-214ENST00000477152 GYPCP04921 128 aa7.06□□□□□ -1.28
BRCA1-214ENST00000477152 ZNF28P17035 718 aa7.06□□□□□ -1.28
BRCA1-214ENST00000477152 LPOP22079 712 aaPredicted RBP7.06□□□□□ -1.28
BRCA1-214ENST00000477152 CDH3P22223 829 aa7.06□□□□□ -1.28
BRCA1-214ENST00000477152 PTPN3P26045 913 aa7.06□□□□□ -1.28
BRCA1-214ENST00000477152 CTNNA2P26232 953 aa7.06□□□□□ -1.28
BRCA1-214ENST00000477152 HADHAP40939 763 aa7.06□□□□□ -1.28
BRCA1-214ENST00000477152 DYNLT1P63172 113 aa7.06□□□□□ -1.28
BRCA1-214ENST00000477152 TFDP3Q5H9I0 405 aa7.06□□□□□ -1.28
BRCA1-214ENST00000477152 IZUMO3Q5VZ72 239 aa7.06□□□□□ -1.28
BRCA1-214ENST00000477152 METRNLQ641Q3 311 aa7.06□□□□□ -1.28
BRCA1-214ENST00000477152 DAAM2Q86T65 1068 aa7.06□□□□□ -1.28
BRCA1-214ENST00000477152 CCDC50Q8IVM0 306 aa7.06□□□□□ -1.28
BRCA1-214ENST00000477152 GPR135Q8IZ08 494 aa7.06□□□□□ -1.28
BRCA1-214ENST00000477152 RCOR2Q8IZ40 523 aa7.06□□□□□ -1.28
BRCA1-214ENST00000477152 OR2L2Q8NH16 312 aa7.06□□□□□ -1.28
BRCA1-214ENST00000477152 CPT1CQ8TCG5 803 aa7.06□□□□□ -1.28
BRCA1-214ENST00000477152 DENND1AQ8TEH3 1009 aa7.06□□□□□ -1.28
BRCA1-214ENST00000477152 TM9SF4Q92544 642 aa7.06□□□□□ -1.28
BRCA1-214ENST00000477152 TADA1Q96BN2 335 aa7.06□□□□□ -1.28
BRCA1-214ENST00000477152 IL17CQ9P0M4 197 aa7.06□□□□□ -1.28
BRCA1-214ENST00000477152 RSPH14Q9UHP6 348 aa7.06□□□□□ -1.28
BRCA1-214ENST00000477152 PLAAQ9Y263 795 aa7.06□□□□□ -1.28
BRCA1-214ENST00000477152 PCYT1BQ9Y5K3 369 aaPredicted RBP7.06□□□□□ -1.28
BRCA1-214ENST00000477152 IGHV5-51A0A0C4DH38 117 aa7.06□□□□□ -1.28
BRCA1-214ENST00000477152 CLEC18AA5D8T8 446 aa7.06□□□□□ -1.28
BRCA1-214ENST00000477152 QSOX1O00391 747 aa7.06□□□□□ -1.28
BRCA1-214ENST00000477152 DLX3O60479 287 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms