RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 PCDHGA6Q9Y5G7 932 aa9.89□□□□□ -0.83
CCM2-208ENST00000476594 AP1M2Q9Y6Q5 423 aa9.89□□□□□ -0.83
CCM2-208ENST00000476594 C9J4A7 227 aa9.88□□□□□ -0.83
CCM2-208ENST00000476594 BHMG1C9JSJ3 638 aaPredicted RBP9.88□□□□□ -0.83
CCM2-208ENST00000476594 DNALI1O14645 258 aaPredicted RBP9.88□□□□□ -0.83
CCM2-208ENST00000476594 RASGRF2O14827 1237 aa9.88□□□□□ -0.83
CCM2-208ENST00000476594 CATP04040 527 aaKnown RBP9.88□□□□□ -0.83
CCM2-208ENST00000476594 PKMP14618 531 aaKnown RBP9.88□□□□□ -0.83
CCM2-208ENST00000476594 ST6GAL1P15907 406 aa9.88□□□□□ -0.83
CCM2-208ENST00000476594 UGT2B7P16662 529 aa9.88□□□□□ -0.83
CCM2-208ENST00000476594 ZNF28P17035 718 aa9.88□□□□□ -0.83
CCM2-208ENST00000476594 PGAM1P18669 254 aa9.88□□□□□ -0.83
CCM2-208ENST00000476594 AGXTP21549 392 aa9.88□□□□□ -0.83
CCM2-208ENST00000476594 PKLRP30613 574 aa9.88□□□□□ -0.83
CCM2-208ENST00000476594 FMO4P31512 558 aa9.88□□□□□ -0.83
CCM2-208ENST00000476594 ABRQ12979 859 aa9.88□□□□□ -0.83
CCM2-208ENST00000476594 SRSF6Q13247 344 aaKnown RBP9.88□□□□□ -0.83
CCM2-208ENST00000476594 GPR19Q15760 415 aa9.88□□□□□ -0.83
CCM2-208ENST00000476594 TBR1Q16650 682 aa9.88□□□□□ -0.83
CCM2-208ENST00000476594 KYNUQ16719 465 aa9.88□□□□□ -0.83
CCM2-208ENST00000476594 ANKRD20A4Q4UJ75 823 aa9.88□□□□□ -0.83
CCM2-208ENST00000476594 ANKRD22Q5VYY1 191 aa9.88□□□□□ -0.83
CCM2-208ENST00000476594 LRRC8EQ6NSJ5 796 aa9.88□□□□□ -0.83
CCM2-208ENST00000476594 UGT3A1Q6NUS8 523 aa9.88□□□□□ -0.83
CCM2-208ENST00000476594 C16orf46Q6P387 395 aa9.88□□□□□ -0.83
CCM2-208ENST00000476594 CES3Q6UWW8 571 aa9.88□□□□□ -0.83
CCM2-208ENST00000476594 NAPRTQ6XQN6 538 aa9.88□□□□□ -0.83
CCM2-208ENST00000476594 ZNF605Q86T29 641 aa9.88□□□□□ -0.83
CCM2-208ENST00000476594 TMEM135Q86UB9 458 aa9.88□□□□□ -0.83
CCM2-208ENST00000476594 CAND1Q86VP6 1230 aaKnown RBP9.88□□□□□ -0.83
CCM2-208ENST00000476594 CILP2Q8IUL8 1156 aa9.88□□□□□ -0.83
CCM2-208ENST00000476594 UNC5BQ8IZJ1 945 aa9.88□□□□□ -0.83
CCM2-208ENST00000476594 PDIK1LQ8N165 341 aa9.88□□□□□ -0.83
CCM2-208ENST00000476594 KRT222Q8N1A0 295 aa9.88□□□□□ -0.83
CCM2-208ENST00000476594 ZBTB2Q8N680 514 aa9.88□□□□□ -0.83
CCM2-208ENST00000476594 NAT8LQ8N9F0 302 aa9.88□□□□□ -0.83
CCM2-208ENST00000476594 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.88□□□□□ -0.83
CCM2-208ENST00000476594 OR2L8Q8NGY9 312 aa9.88□□□□□ -0.83
CCM2-208ENST00000476594 APOBEC4Q8WW27 367 aaKnown RBP9.88□□□□□ -0.83
CCM2-208ENST00000476594 LPGAT1Q92604 370 aa9.88□□□□□ -0.83
CCM2-208ENST00000476594 MR1Q95460 341 aa9.88□□□□□ -0.83
CCM2-208ENST00000476594 CAPZA3Q96KX2 299 aa9.88□□□□□ -0.83
CCM2-208ENST00000476594 DDX47Q9H0S4 455 aaKnown RBP9.88□□□□□ -0.83
CCM2-208ENST00000476594 ACTR5Q9H9F9 607 aaPredicted RBP9.88□□□□□ -0.83
CCM2-208ENST00000476594 C20orf96Q9NUD7 363 aaPredicted RBP9.88□□□□□ -0.83
CCM2-208ENST00000476594 SPATA7Q9P0W8 599 aa9.88□□□□□ -0.83
CCM2-208ENST00000476594 POLHQ9Y253 713 aa9.88□□□□□ -0.83
CCM2-208ENST00000476594 PADI2Q9Y2J8 665 aa9.88□□□□□ -0.83
CCM2-208ENST00000476594 SMG1Q96Q15 3661 aaKnown RBP9.87□□□□□ -0.83
CCM2-208ENST00000476594 PABPN1LA6NDY0 278 aaKnown RBP9.87□□□□□ -0.83
CCM2-208ENST00000476594 IQCF5A8MTL0 148 aa9.87□□□□□ -0.83
CCM2-208ENST00000476594 ZNF185O15231 689 aa9.87□□□□□ -0.83
CCM2-208ENST00000476594 AVILO75366 819 aa9.87□□□□□ -0.83
CCM2-208ENST00000476594 CREG1O75629 220 aa9.87□□□□□ -0.83
CCM2-208ENST00000476594 NTRK1P04629 796 aa9.87□□□□□ -0.83
CCM2-208ENST00000476594 PRKAR1AP10644 381 aa9.87□□□□□ -0.83
CCM2-208ENST00000476594 ENO3P13929 434 aaPredicted RBP9.87□□□□□ -0.83
CCM2-208ENST00000476594 CD9P21926 228 aa9.87□□□□□ -0.83
CCM2-208ENST00000476594 HSD17B2P37059 387 aa9.87□□□□□ -0.83
CCM2-208ENST00000476594 DR1Q01658 176 aa9.87□□□□□ -0.83
CCM2-208ENST00000476594 LY6DQ14210 128 aa9.87□□□□□ -0.83
CCM2-208ENST00000476594 MORF4L2Q15014 288 aa9.87□□□□□ -0.83
CCM2-208ENST00000476594 ZC3H12BQ5HYM0 836 aaKnown RBP9.87□□□□□ -0.83
CCM2-208ENST00000476594 RNASEH2BQ5TBB1 312 aaKnown RBP9.87□□□□□ -0.83
CCM2-208ENST00000476594 IZUMO3Q5VZ72 239 aa9.87□□□□□ -0.83
CCM2-208ENST00000476594 PAPD7Q5XG87 772 aaKnown RBP9.87□□□□□ -0.83
CCM2-208ENST00000476594 TLDC1Q6P9B6 456 aa9.87□□□□□ -0.83
CCM2-208ENST00000476594 SYVN1Q86TM6 617 aa9.87□□□□□ -0.83
CCM2-208ENST00000476594 BBOF1Q8ND07 529 aa9.87□□□□□ -0.83
CCM2-208ENST00000476594 LKAAEAR1Q8TD35 194 aa9.87□□□□□ -0.83
CCM2-208ENST00000476594 DLG3Q92796 817 aa9.87□□□□□ -0.83
CCM2-208ENST00000476594 KCNJ9Q92806 393 aa9.87□□□□□ -0.83
CCM2-208ENST00000476594 LRRC39Q96DD0 335 aa9.87□□□□□ -0.83
CCM2-208ENST00000476594 TWSG1Q9GZX9 223 aa9.87□□□□□ -0.83
CCM2-208ENST00000476594 TXLNGQ9NUQ3 528 aa9.87□□□□□ -0.83
CCM2-208ENST00000476594 GEMIN8Q9NWZ8 242 aaKnown RBP9.87□□□□□ -0.83
CCM2-208ENST00000476594 UTP6Q9NYH9 597 aaKnown RBP9.87□□□□□ -0.83
CCM2-208ENST00000476594 KLHL42Q9P2K6 505 aa9.87□□□□□ -0.83
CCM2-208ENST00000476594 G3BP2Q9UN86 482 aaKnown RBP9.87□□□□□ -0.83
CCM2-208ENST00000476594 CDYLQ9Y232 598 aa9.87□□□□□ -0.83
CCM2-208ENST00000476594 CRYL1Q9Y2S2 319 aa9.87□□□□□ -0.83
CCM2-208ENST00000476594 SPTA1P02549 2419 aa9.86□□□□□ -0.83
CCM2-208ENST00000476594 GOLGA8KD6RF30 607 aa9.86□□□□□ -0.83
CCM2-208ENST00000476594 GOLGA8TH3BQL2 631 aa9.86□□□□□ -0.83
CCM2-208ENST00000476594 MEN1O00255 615 aa9.86□□□□□ -0.83
CCM2-208ENST00000476594 EIF3FO00303 357 aaPredicted RBP9.86□□□□□ -0.83
CCM2-208ENST00000476594 NIPSNAP2O75323 286 aa9.86□□□□□ -0.83
CCM2-208ENST00000476594 VPS26AO75436 327 aa9.86□□□□□ -0.83
CCM2-208ENST00000476594 OR2B3O76000 313 aa9.86□□□□□ -0.83
CCM2-208ENST00000476594 RAB40ALP0C0E4 278 aa9.86□□□□□ -0.83
CCM2-208ENST00000476594 CBSLP0DN79 551 aa9.86□□□□□ -0.83
CCM2-208ENST00000476594 WT1P19544 449 aaPredicted RBP9.86□□□□□ -0.83
CCM2-208ENST00000476594 ARNTP27540 789 aa9.86□□□□□ -0.83
CCM2-208ENST00000476594 OAS2P29728 719 aaKnown RBP9.86□□□□□ -0.83
CCM2-208ENST00000476594 CBSP35520 551 aa9.86□□□□□ -0.83
CCM2-208ENST00000476594 MAGEA3P43357 314 aa9.86□□□□□ -0.83
CCM2-208ENST00000476594 RGS4P49798 205 aa9.86□□□□□ -0.83
CCM2-208ENST00000476594 POLE2P56282 527 aa9.86□□□□□ -0.83
CCM2-208ENST00000476594 ARL4CP56559 192 aa9.86□□□□□ -0.83
CCM2-208ENST00000476594 CYP4F2P78329 520 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms