RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 ZNF225Q9UK10 706 aa13.37□□□□□ -0.27
TRAF4-210ENST00000475329 PSMD13Q9UNM6 376 aa13.37□□□□□ -0.27
TRAF4-210ENST00000475329 ASF1AQ9Y294 204 aa13.37□□□□□ -0.27
TRAF4-210ENST00000475329 GPSM3Q9Y4H4 160 aa13.37□□□□□ -0.27
TRAF4-210ENST00000475329 TIMM22Q9Y584 194 aa13.37□□□□□ -0.27
TRAF4-210ENST00000475329 SPTBN5Q9NRC6 3674 aaKnown RBP13.36□□□□□ -0.27
TRAF4-210ENST00000475329 PRUNE2Q8WUY3 3088 aa13.36□□□□□ -0.27
TRAF4-210ENST00000475329 CAPN14A8MX76 684 aa13.36□□□□□ -0.27
TRAF4-210ENST00000475329 TNFRSF10CO14798 259 aa13.36□□□□□ -0.27
TRAF4-210ENST00000475329 HNRNPCL1O60812 293 aaKnown RBP13.36□□□□□ -0.27
TRAF4-210ENST00000475329 NDUFS2O75306 463 aa13.36□□□□□ -0.27
TRAF4-210ENST00000475329 UNC5CO95185 931 aa13.36□□□□□ -0.27
TRAF4-210ENST00000475329 CBX6O95503 412 aa13.36□□□□□ -0.27
TRAF4-210ENST00000475329 SLC16A8O95907 504 aa13.36□□□□□ -0.27
TRAF4-210ENST00000475329 CAPN1P07384 714 aa13.36□□□□□ -0.27
TRAF4-210ENST00000475329 EBLN1P0CF75 366 aa13.36□□□□□ -0.27
TRAF4-210ENST00000475329 IMPA1P29218 277 aa13.36□□□□□ -0.27
TRAF4-210ENST00000475329 RABIFP47224 123 aa13.36□□□□□ -0.27
TRAF4-210ENST00000475329 CLCNKAP51800 687 aa13.36□□□□□ -0.27
TRAF4-210ENST00000475329 NCALDP61601 193 aa13.36□□□□□ -0.27
TRAF4-210ENST00000475329 GLIPR1L2Q4G1C9 344 aa13.36□□□□□ -0.27
TRAF4-210ENST00000475329 ENPP7Q6UWV6 458 aa13.36□□□□□ -0.27
TRAF4-210ENST00000475329 ABI3BPQ7Z7G0 1075 aa13.36□□□□□ -0.27
TRAF4-210ENST00000475329 CAMKK1Q8N5S9 505 aa13.36□□□□□ -0.27
TRAF4-210ENST00000475329 DCBLD1Q8N8Z6 715 aa13.36□□□□□ -0.27
TRAF4-210ENST00000475329 OR1E3Q8WZA6 343 aa13.36□□□□□ -0.27
TRAF4-210ENST00000475329 SNX19Q92543 992 aa13.36□□□□□ -0.27
TRAF4-210ENST00000475329 TFGQ92734 400 aaPredicted RBP13.36□□□□□ -0.27
TRAF4-210ENST00000475329 BIRC7Q96CA5 298 aa13.36□□□□□ -0.27
TRAF4-210ENST00000475329 PDXPQ96GD0 296 aa13.36□□□□□ -0.27
TRAF4-210ENST00000475329 MAGEB10Q96LZ2 347 aaPredicted RBP13.36□□□□□ -0.27
TRAF4-210ENST00000475329 CDK15Q96Q40 435 aa13.36□□□□□ -0.27
TRAF4-210ENST00000475329 CCT7Q99832 543 aa13.36□□□□□ -0.27
TRAF4-210ENST00000475329 SLC29A3Q9BZD2 475 aa13.36□□□□□ -0.27
TRAF4-210ENST00000475329 ATG10Q9H0Y0 220 aa13.36□□□□□ -0.27
TRAF4-210ENST00000475329 PCED1AQ9H1Q7 454 aa13.36□□□□□ -0.27
TRAF4-210ENST00000475329 ACTR8Q9H981 624 aa13.36□□□□□ -0.27
TRAF4-210ENST00000475329 EBF2Q9HAK2 575 aa13.36□□□□□ -0.27
TRAF4-210ENST00000475329 MRGBPQ9NV56 204 aa13.36□□□□□ -0.27
TRAF4-210ENST00000475329 ARL8BQ9NVJ2 186 aa13.36□□□□□ -0.27
TRAF4-210ENST00000475329 KLQ9UEF7 1012 aa13.36□□□□□ -0.27
TRAF4-210ENST00000475329 KCNK6Q9Y257 313 aa13.36□□□□□ -0.27
TRAF4-210ENST00000475329 BTRCQ9Y297 605 aa13.36□□□□□ -0.27
TRAF4-210ENST00000475329 RRP15Q9Y3B9 282 aaKnown RBP13.36□□□□□ -0.27
TRAF4-210ENST00000475329 SIT1Q9Y3P8 196 aa13.36□□□□□ -0.27
TRAF4-210ENST00000475329 CAPN7Q9Y6W3 813 aa13.36□□□□□ -0.27
TRAF4-210ENST00000475329 A0A0C4DFX4 3053 aa13.36□□□□□ -0.27
TRAF4-210ENST00000475329 PRR19A6NJB7 356 aa13.35□□□□□ -0.27
TRAF4-210ENST00000475329 PRR5-ARHGAP8B1AHC4 643 aa13.35□□□□□ -0.27
TRAF4-210ENST00000475329 SLC22A2O15244 555 aa13.35□□□□□ -0.27
TRAF4-210ENST00000475329 DCXO43602 365 aa13.35□□□□□ -0.27
TRAF4-210ENST00000475329 AOC1P19801 751 aa13.35□□□□□ -0.27
TRAF4-210ENST00000475329 IDSP22304 550 aa13.35□□□□□ -0.27
TRAF4-210ENST00000475329 ITPKAP23677 461 aa13.35□□□□□ -0.27
TRAF4-210ENST00000475329 MTAPQ13126 283 aa13.35□□□□□ -0.27
TRAF4-210ENST00000475329 NAE1Q13564 534 aa13.35□□□□□ -0.27
TRAF4-210ENST00000475329 ZXDCQ2QGD7 858 aaPredicted RBP13.35□□□□□ -0.27
TRAF4-210ENST00000475329 GGTA1PQ4G0N0 100 aa13.35□□□□□ -0.27
TRAF4-210ENST00000475329 FAM219BQ5XKK7 198 aa13.35□□□□□ -0.27
TRAF4-210ENST00000475329 CAPRIN2Q6IMN6 1127 aaKnown RBP13.35□□□□□ -0.27
TRAF4-210ENST00000475329 Q6ZSR6 202 aa13.35□□□□□ -0.27
TRAF4-210ENST00000475329 THOC6Q86W42 341 aaKnown RBP13.35□□□□□ -0.27
TRAF4-210ENST00000475329 FAM160A2Q8N612 972 aaPredicted RBP13.35□□□□□ -0.27
TRAF4-210ENST00000475329 SPDYE1Q8NFV5 336 aaPredicted RBP13.35□□□□□ -0.27
TRAF4-210ENST00000475329 OR5AR1Q8NGP9 310 aa13.35□□□□□ -0.27
TRAF4-210ENST00000475329 OR56A3Q8NH54 315 aa13.35□□□□□ -0.27
TRAF4-210ENST00000475329 FAM174AQ8TBP5 190 aa13.35□□□□□ -0.27
TRAF4-210ENST00000475329 METTL6Q8TCB7 284 aa13.35□□□□□ -0.27
TRAF4-210ENST00000475329 RLN3Q8WXF3 142 aa13.35□□□□□ -0.27
TRAF4-210ENST00000475329 RAD51AP1Q96B01 352 aa13.35□□□□□ -0.27
TRAF4-210ENST00000475329 PYCR2Q96C36 320 aa13.35□□□□□ -0.27
TRAF4-210ENST00000475329 MED8Q96G25 268 aa13.35□□□□□ -0.27
TRAF4-210ENST00000475329 NSL1Q96IY1 281 aa13.35□□□□□ -0.27
TRAF4-210ENST00000475329 CATSPER2Q96P56 530 aa13.35□□□□□ -0.27
TRAF4-210ENST00000475329 TRIT1Q9H3H1 467 aaKnown RBP13.35□□□□□ -0.27
TRAF4-210ENST00000475329 TUBB1Q9H4B7 451 aa13.35□□□□□ -0.27
TRAF4-210ENST00000475329 ZNF385DQ9H6B1 395 aa13.35□□□□□ -0.27
TRAF4-210ENST00000475329 RIC8BQ9NVN3 520 aa13.35□□□□□ -0.27
TRAF4-210ENST00000475329 CIDEBQ9UHD4 219 aa13.35□□□□□ -0.27
TRAF4-210ENST00000475329 SLC22A14Q9Y267 594 aa13.35□□□□□ -0.27
TRAF4-210ENST00000475329 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.35□□□□□ -0.27
TRAF4-210ENST00000475329 PTGDR2Q9Y5Y4 395 aa13.35□□□□□ -0.27
TRAF4-210ENST00000475329 ST14Q9Y5Y6 855 aa13.35□□□□□ -0.27
TRAF4-210ENST00000475329 A0A1W2PPC4 97 aa13.34□□□□□ -0.27
TRAF4-210ENST00000475329 PDZK1P1A8MUH7 402 aa13.34□□□□□ -0.27
TRAF4-210ENST00000475329 ANKRD65E5RJM6 399 aa13.34□□□□□ -0.27
TRAF4-210ENST00000475329 CLDN9O95484 217 aa13.34□□□□□ -0.27
TRAF4-210ENST00000475329 LINC00032P0C843 101 aa13.34□□□□□ -0.27
TRAF4-210ENST00000475329 T-ENOLP0DO92 83 aa13.34□□□□□ -0.27
TRAF4-210ENST00000475329 ESRRAP11474 423 aaPredicted RBP13.34□□□□□ -0.27
TRAF4-210ENST00000475329 EPORP19235 508 aa13.34□□□□□ -0.27
TRAF4-210ENST00000475329 CALB2P22676 271 aa13.34□□□□□ -0.27
TRAF4-210ENST00000475329 RPL10P27635 214 aaKnown RBP13.34□□□□□ -0.27
TRAF4-210ENST00000475329 ADSLP30566 484 aaPredicted RBP13.34□□□□□ -0.27
TRAF4-210ENST00000475329 MAGEA9P43362 315 aa13.34□□□□□ -0.27
TRAF4-210ENST00000475329 RASSF2P50749 326 aa13.34□□□□□ -0.27
TRAF4-210ENST00000475329 CORO7P57737 925 aa13.34□□□□□ -0.27
TRAF4-210ENST00000475329 SRP54P61011 504 aaKnown RBP13.34□□□□□ -0.27
TRAF4-210ENST00000475329 TBPL1P62380 186 aa13.34□□□□□ -0.27
TRAF4-210ENST00000475329 ACTN3Q08043 901 aaPredicted RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms