RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 CNOT3O75175 753 aaKnown RBP12.12□□□□□ -0.47
SKA3-206ENST00000475251 AP2A2O94973 939 aa12.12□□□□□ -0.47
SKA3-206ENST00000475251 CHRM5P08912 532 aaPredicted RBP12.12□□□□□ -0.47
SKA3-206ENST00000475251 PECAM1P16284 738 aaPredicted RBP12.12□□□□□ -0.47
SKA3-206ENST00000475251 PDHA2P29803 388 aa12.12□□□□□ -0.47
SKA3-206ENST00000475251 XIAPP98170 497 aa12.12□□□□□ -0.47
SKA3-206ENST00000475251 FANCCQ00597 558 aa12.12□□□□□ -0.47
SKA3-206ENST00000475251 MFAP5Q13361 173 aa12.12□□□□□ -0.47
SKA3-206ENST00000475251 PRPSAP1Q14558 356 aa12.12□□□□□ -0.47
SKA3-206ENST00000475251 KIR2DS3Q14952 304 aa12.12□□□□□ -0.47
SKA3-206ENST00000475251 YOD1Q5VVQ6 348 aaPredicted RBP12.12□□□□□ -0.47
SKA3-206ENST00000475251 UNC5AQ6ZN44 842 aa12.12□□□□□ -0.47
SKA3-206ENST00000475251 OVCH1Q7RTY7 1134 aa12.12□□□□□ -0.47
SKA3-206ENST00000475251 TRIM73Q86UV7 250 aa12.12□□□□□ -0.47
SKA3-206ENST00000475251 PPP1R2P1Q96PQ5 205 aa12.12□□□□□ -0.47
SKA3-206ENST00000475251 QKIQ96PU8 341 aaKnown RBP eCLIP12.12□□□□□ -0.47
SKA3-206ENST00000475251 LMF1Q96S06 567 aa12.12□□□□□ -0.47
SKA3-206ENST00000475251 GBA3Q9H227 469 aa12.12□□□□□ -0.47
SKA3-206ENST00000475251 SLC26A1Q9H2B4 701 aa12.12□□□□□ -0.47
SKA3-206ENST00000475251 SEMA3GQ9NS98 782 aa12.12□□□□□ -0.47
SKA3-206ENST00000475251 IL1RAPL1Q9NZN1 696 aa12.12□□□□□ -0.47
SKA3-206ENST00000475251 FEZ2Q9UHY8 353 aaPredicted RBP12.12□□□□□ -0.47
SKA3-206ENST00000475251 ASF1AQ9Y294 204 aa12.12□□□□□ -0.47
SKA3-206ENST00000475251 DIDO1Q9BTC0 2240 aaKnown RBP12.12□□□□□ -0.47
SKA3-206ENST00000475251 FER1L5A0AVI2 2057 aa12.12□□□□□ -0.47
SKA3-206ENST00000475251 CSMD1Q96PZ7 3565 aa12.11□□□□□ -0.47
SKA3-206ENST00000475251 IGLV3-16A0A075B6K0 115 aa12.11□□□□□ -0.47
SKA3-206ENST00000475251 DYTNA2CJ06 578 aa12.11□□□□□ -0.47
SKA3-206ENST00000475251 ISM1B1AKI9 464 aa12.11□□□□□ -0.47
SKA3-206ENST00000475251 SOCS6O14544 535 aa12.11□□□□□ -0.47
SKA3-206ENST00000475251 PSTPIP1O43586 416 aa12.11□□□□□ -0.47
SKA3-206ENST00000475251 AKR1B10O60218 316 aa12.11□□□□□ -0.47
SKA3-206ENST00000475251 ONECUT2O95948 504 aa12.11□□□□□ -0.47
SKA3-206ENST00000475251 AGTP01019 485 aa12.11□□□□□ -0.47
SKA3-206ENST00000475251 GYPCP04921 128 aa12.11□□□□□ -0.47
SKA3-206ENST00000475251 TNNT1P13805 278 aa12.11□□□□□ -0.47
SKA3-206ENST00000475251 ACRV1P26436 265 aa12.11□□□□□ -0.47
SKA3-206ENST00000475251 PLOD1Q02809 727 aaPredicted RBP12.11□□□□□ -0.47
SKA3-206ENST00000475251 ZIC1Q15915 447 aa12.11□□□□□ -0.47
SKA3-206ENST00000475251 RBBP7Q16576 425 aa12.11□□□□□ -0.47
SKA3-206ENST00000475251 TAZQ16635 292 aa12.11□□□□□ -0.47
SKA3-206ENST00000475251 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.11□□□□□ -0.47
SKA3-206ENST00000475251 ZNF658BQ4V348 819 aaPredicted RBP12.11□□□□□ -0.47
SKA3-206ENST00000475251 TFDP3Q5H9I0 405 aa12.11□□□□□ -0.47
SKA3-206ENST00000475251 KAZNQ674X7 775 aa12.11□□□□□ -0.47
SKA3-206ENST00000475251 RANBP10Q6VN20 620 aa12.11□□□□□ -0.47
SKA3-206ENST00000475251 TTLL10Q6ZVT0 673 aa12.11□□□□□ -0.47
SKA3-206ENST00000475251 TMTC1Q8IUR5 882 aa12.11□□□□□ -0.47
SKA3-206ENST00000475251 DNAJC22Q8N4W6 341 aa12.11□□□□□ -0.47
SKA3-206ENST00000475251 OR13C4Q8NGS5 318 aa12.11□□□□□ -0.47
SKA3-206ENST00000475251 THOC3Q96J01 351 aaKnown RBP12.11□□□□□ -0.47
SKA3-206ENST00000475251 TRIM56Q9BRZ2 755 aaKnown RBP12.11□□□□□ -0.47
SKA3-206ENST00000475251 KRTAP3-3Q9BYR6 98 aa12.11□□□□□ -0.47
SKA3-206ENST00000475251 KRTAP3-2Q9BYR7 98 aa12.11□□□□□ -0.47
SKA3-206ENST00000475251 INTS7Q9NVH2 962 aaKnown RBP12.11□□□□□ -0.47
SKA3-206ENST00000475251 EURLQ9NYK6 297 aa12.11□□□□□ -0.47
SKA3-206ENST00000475251 HS3ST3B1Q9Y662 390 aa12.11□□□□□ -0.47
SKA3-206ENST00000475251 OTOGQ6ZRI0 2925 aa12.11□□□□□ -0.47
SKA3-206ENST00000475251 CCDC88CQ9P219 2028 aa12.11□□□□□ -0.47
SKA3-206ENST00000475251 FBN2P35556 2912 aa12.1□□□□□ -0.47
SKA3-206ENST00000475251 F8W8V4 182 aa12.1□□□□□ -0.47
SKA3-206ENST00000475251 HCRTR1O43613 425 aa12.1□□□□□ -0.47
SKA3-206ENST00000475251 STK10O94804 968 aaKnown RBP12.1□□□□□ -0.47
SKA3-206ENST00000475251 AP2A1O95782 977 aa12.1□□□□□ -0.47
SKA3-206ENST00000475251 FTH1P02794 183 aa12.1□□□□□ -0.47
SKA3-206ENST00000475251 COX6B1P14854 86 aa12.1□□□□□ -0.47
SKA3-206ENST00000475251 MC4RP32245 332 aa12.1□□□□□ -0.47
SKA3-206ENST00000475251 CARSP49589 748 aaKnown RBP12.1□□□□□ -0.47
SKA3-206ENST00000475251 ZNF140P52738 457 aaPredicted RBP12.1□□□□□ -0.47
SKA3-206ENST00000475251 ARG2P78540 354 aa12.1□□□□□ -0.47
SKA3-206ENST00000475251 TMPRSS15P98073 1019 aa12.1□□□□□ -0.47
SKA3-206ENST00000475251 GRM7Q14831 915 aa12.1□□□□□ -0.47
SKA3-206ENST00000475251 NKG7Q16617 165 aa12.1□□□□□ -0.47
SKA3-206ENST00000475251 VWA2Q5GFL6 755 aa12.1□□□□□ -0.47
SKA3-206ENST00000475251 ZC3H12BQ5HYM0 836 aaKnown RBP12.1□□□□□ -0.47
SKA3-206ENST00000475251 TCTE1Q5JU00 501 aa12.1□□□□□ -0.47
SKA3-206ENST00000475251 KIRREL2Q6UWL6 708 aa12.1□□□□□ -0.47
SKA3-206ENST00000475251 RPTNQ6XPR3 784 aa12.1□□□□□ -0.47
SKA3-206ENST00000475251 BNC2Q6ZN30 1099 aaPredicted RBP12.1□□□□□ -0.47
SKA3-206ENST00000475251 TAS2R42Q7RTR8 314 aa12.1□□□□□ -0.47
SKA3-206ENST00000475251 ZNF808Q8N4W9 903 aaPredicted RBP12.1□□□□□ -0.47
SKA3-206ENST00000475251 TTC29Q8NA56 475 aaPredicted RBP12.1□□□□□ -0.47
SKA3-206ENST00000475251 OR5AR1Q8NGP9 310 aa12.1□□□□□ -0.47
SKA3-206ENST00000475251 OR5K2Q8NHB8 316 aa12.1□□□□□ -0.47
SKA3-206ENST00000475251 SLC22A18Q96BI1 424 aa12.1□□□□□ -0.47
SKA3-206ENST00000475251 MAGEB10Q96LZ2 347 aaPredicted RBP12.1□□□□□ -0.47
SKA3-206ENST00000475251 SPSB2Q99619 263 aa12.1□□□□□ -0.47
SKA3-206ENST00000475251 NRTNQ99748 197 aa12.1□□□□□ -0.47
SKA3-206ENST00000475251 FAM96AQ9H5X1 160 aa12.1□□□□□ -0.47
SKA3-206ENST00000475251 SLC22A11Q9NSA0 550 aa12.1□□□□□ -0.47
SKA3-206ENST00000475251 ZNHIT6Q9NWK9 470 aaKnown RBP12.1□□□□□ -0.47
SKA3-206ENST00000475251 SPHK1Q9NYA1 384 aa12.1□□□□□ -0.47
SKA3-206ENST00000475251 TDRKHQ9Y2W6 561 aaKnown RBP12.1□□□□□ -0.47
SKA3-206ENST00000475251 GTF3C3Q9Y5Q9 886 aa12.1□□□□□ -0.47
SKA3-206ENST00000475251 ANKRD12Q6UB98 2062 aa12.1□□□□□ -0.47
SKA3-206ENST00000475251 MDC1Q14676 2089 aaKnown RBP12.09□□□□□ -0.47
SKA3-206ENST00000475251 TRAV17A0A0B4J275 112 aa12.09□□□□□ -0.47
SKA3-206ENST00000475251 TRBV5-4A0A0C4DH59 114 aa12.09□□□□□ -0.47
SKA3-206ENST00000475251 PCDH17O14917 1159 aa12.09□□□□□ -0.47
SKA3-206ENST00000475251 DSCR3O14972 297 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms