RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 FGBP02675 491 aa4.01□□□□□ -1.77
USP16-205ENST00000474835 MT-ND2P03891 347 aa4.01□□□□□ -1.77
USP16-205ENST00000474835 HMGN1P05114 100 aa4.01□□□□□ -1.77
USP16-205ENST00000474835 YES1P07947 543 aa4.01□□□□□ -1.77
USP16-205ENST00000474835 MTHFD1P11586 935 aaKnown RBP4.01□□□□□ -1.77
USP16-205ENST00000474835 CD1DP15813 335 aa4.01□□□□□ -1.77
USP16-205ENST00000474835 LRPAP1P30533 357 aa4.01□□□□□ -1.77
USP16-205ENST00000474835 JAK3P52333 1124 aa4.01□□□□□ -1.77
USP16-205ENST00000474835 GBX2P52951 348 aaPredicted RBP4.01□□□□□ -1.77
USP16-205ENST00000474835 MVDP53602 400 aa4.01□□□□□ -1.77
USP16-205ENST00000474835 FOXA1P55317 472 aa4.01□□□□□ -1.77
USP16-205ENST00000474835 COPZ1P61923 177 aa4.01□□□□□ -1.77
USP16-205ENST00000474835 ZNF33BQ06732 778 aa4.01□□□□□ -1.77
USP16-205ENST00000474835 FASTKQ14296 549 aaKnown RBP4.01□□□□□ -1.77
USP16-205ENST00000474835 LARS2Q15031 903 aaKnown RBP4.01□□□□□ -1.77
USP16-205ENST00000474835 HFEQ30201 348 aa4.01□□□□□ -1.77
USP16-205ENST00000474835 FBXO43Q4G163 708 aa4.01□□□□□ -1.77
USP16-205ENST00000474835 MFSD14BQ5SR56 506 aa4.01□□□□□ -1.77
USP16-205ENST00000474835 TTC23Q5W5X9 447 aa4.01□□□□□ -1.77
USP16-205ENST00000474835 TMC5Q6UXY8 1006 aa4.01□□□□□ -1.77
USP16-205ENST00000474835 CAMKMTQ7Z624 323 aa4.01□□□□□ -1.77
USP16-205ENST00000474835 CILP2Q8IUL8 1156 aa4.01□□□□□ -1.77
USP16-205ENST00000474835 ARHGAP12Q8IWW6 846 aa4.01□□□□□ -1.77
USP16-205ENST00000474835 CYP4Z2PQ8N1L4 340 aa4.01□□□□□ -1.77
USP16-205ENST00000474835 CADM2Q8N3J6 435 aa4.01□□□□□ -1.77
USP16-205ENST00000474835 LRRC71Q8N4P6 559 aa4.01□□□□□ -1.77
USP16-205ENST00000474835 CLDN22Q8N7P3 220 aa4.01□□□□□ -1.77
USP16-205ENST00000474835 UBTD2Q8WUN7 234 aa4.01□□□□□ -1.77
USP16-205ENST00000474835 ANKRD49Q8WVL7 239 aa4.01□□□□□ -1.77
USP16-205ENST00000474835 HTR3CQ8WXA8 447 aa4.01□□□□□ -1.77
USP16-205ENST00000474835 ATOH1Q92858 354 aaPredicted RBP4.01□□□□□ -1.77
USP16-205ENST00000474835 SLC25A46Q96AG3 418 aa4.01□□□□□ -1.77
USP16-205ENST00000474835 CPB2Q96IY4 423 aa4.01□□□□□ -1.77
USP16-205ENST00000474835 MAGEB10Q96LZ2 347 aaPredicted RBP4.01□□□□□ -1.77
USP16-205ENST00000474835 FYTTD1Q96QD9 318 aaKnown RBP4.01□□□□□ -1.77
USP16-205ENST00000474835 EPYCQ99645 322 aa4.01□□□□□ -1.77
USP16-205ENST00000474835 FAM83CQ9BQN1 747 aa4.01□□□□□ -1.77
USP16-205ENST00000474835 TTLL2Q9BWV7 592 aa4.01□□□□□ -1.77
USP16-205ENST00000474835 ITPAQ9BY32 194 aa4.01□□□□□ -1.77
USP16-205ENST00000474835 ESRP2Q9H6T0 727 aaKnown RBP4.01□□□□□ -1.77
USP16-205ENST00000474835 SPON1Q9HCB6 807 aa4.01□□□□□ -1.77
USP16-205ENST00000474835 B3GAT2Q9NPZ5 323 aa4.01□□□□□ -1.77
USP16-205ENST00000474835 NPDC1Q9NQX5 325 aaPredicted RBP4.01□□□□□ -1.77
USP16-205ENST00000474835 ABCC13Q9NSE7 274 aa4.01□□□□□ -1.77
USP16-205ENST00000474835 LYARQ9NX58 379 aaKnown RBP4.01□□□□□ -1.77
USP16-205ENST00000474835 CNOT2Q9NZN8 540 aaKnown RBP4.01□□□□□ -1.77
USP16-205ENST00000474835 PADI2Q9Y2J8 665 aa4.01□□□□□ -1.77
USP16-205ENST00000474835 ZSCAN5BA6NJL1 495 aa4.01□□□□□ -1.77
USP16-205ENST00000474835 SYCE1LA8MT33 242 aa4.01□□□□□ -1.77
USP16-205ENST00000474835 PLK4O00444 970 aa4.01□□□□□ -1.77
USP16-205ENST00000474835 STK25O00506 426 aa4.01□□□□□ -1.77
USP16-205ENST00000474835 MAN2B1O00754 1011 aa4.01□□□□□ -1.77
USP16-205ENST00000474835 RPS6KA4O75676 772 aa4.01□□□□□ -1.77
USP16-205ENST00000474835 IPO13O94829 963 aaKnown RBP4.01□□□□□ -1.77
USP16-205ENST00000474835 CYP11A1P05108 521 aa4.01□□□□□ -1.77
USP16-205ENST00000474835 MGAT1P26572 445 aa4.01□□□□□ -1.77
USP16-205ENST00000474835 RPL9P32969 192 aaKnown RBP4.01□□□□□ -1.77
USP16-205ENST00000474835 RAB10P61026 200 aa4.01□□□□□ -1.77
USP16-205ENST00000474835 POU4F1Q01851 419 aa4.01□□□□□ -1.77
USP16-205ENST00000474835 FPGSQ05932 587 aa4.01□□□□□ -1.77
USP16-205ENST00000474835 RING1Q06587 406 aa4.01□□□□□ -1.77
USP16-205ENST00000474835 CETN1Q12798 172 aa4.01□□□□□ -1.77
USP16-205ENST00000474835 KRR1Q13601 381 aaKnown RBP4.01□□□□□ -1.77
USP16-205ENST00000474835 ANKRD39Q53RE8 183 aa4.01□□□□□ -1.77
USP16-205ENST00000474835 TMEM255AQ5JRV8 349 aa4.01□□□□□ -1.77
USP16-205ENST00000474835 RBM20Q5T481 1227 aaKnown RBP4.01□□□□□ -1.77
USP16-205ENST00000474835 ZNF470Q6ECI4 717 aa4.01□□□□□ -1.77
USP16-205ENST00000474835 DCUN1D2Q6PH85 259 aa4.01□□□□□ -1.77
USP16-205ENST00000474835 BHLHB9Q6PI77 547 aa4.01□□□□□ -1.77
USP16-205ENST00000474835 METAP1DQ6UB28 335 aaPredicted RBP4.01□□□□□ -1.77
USP16-205ENST00000474835 AFTPHQ6ULP2 937 aa4.01□□□□□ -1.77
USP16-205ENST00000474835 MSANTD1Q6ZTZ1 278 aa4.01□□□□□ -1.77
USP16-205ENST00000474835 CEP68Q76N32 757 aa4.01□□□□□ -1.77
USP16-205ENST00000474835 CUZD1Q86UP6 607 aa4.01□□□□□ -1.77
USP16-205ENST00000474835 VWA5B2Q8N398 1253 aa4.01□□□□□ -1.77
USP16-205ENST00000474835 NPWQ8N729 165 aa4.01□□□□□ -1.77
USP16-205ENST00000474835 CREB3L4Q8TEY5 395 aa4.01□□□□□ -1.77
USP16-205ENST00000474835 DNAJA4Q8WW22 397 aaPredicted RBP4.01□□□□□ -1.77
USP16-205ENST00000474835 KCTD13Q8WZ19 329 aa4.01□□□□□ -1.77
USP16-205ENST00000474835 PGLYRP2Q96PD5 576 aa4.01□□□□□ -1.77
USP16-205ENST00000474835 CDCA7Q9BWT1 371 aaPredicted RBP4.01□□□□□ -1.77
USP16-205ENST00000474835 JPH1Q9HDC5 661 aaPredicted RBP4.01□□□□□ -1.77
USP16-205ENST00000474835 SLC6A13Q9NSD5 602 aa4.01□□□□□ -1.77
USP16-205ENST00000474835 COMMD8Q9NX08 183 aa4.01□□□□□ -1.77
USP16-205ENST00000474835 TAS2R9Q9NYW1 312 aa4.01□□□□□ -1.77
USP16-205ENST00000474835 SNX6Q9UNH7 406 aa4.01□□□□□ -1.77
USP16-205ENST00000474835 INVSQ9Y283 1065 aa4.01□□□□□ -1.77
USP16-205ENST00000474835 A0A0A6YYJ9 748 aa4.01□□□□□ -1.77
USP16-205ENST00000474835 SLC22A23A1A5C7 686 aa4.01□□□□□ -1.77
USP16-205ENST00000474835 FAM234BA2RU67 622 aa4.01□□□□□ -1.77
USP16-205ENST00000474835 OR2M5A3KFT3 312 aa4.01□□□□□ -1.77
USP16-205ENST00000474835 TMEM150BA6NC51 233 aa4.01□□□□□ -1.77
USP16-205ENST00000474835 ASNA1O43681 348 aa4.01□□□□□ -1.77
USP16-205ENST00000474835 CHP2O43745 196 aa4.01□□□□□ -1.77
USP16-205ENST00000474835 MFSD11O43934 449 aa4.01□□□□□ -1.77
USP16-205ENST00000474835 HEXAP06865 529 aa4.01□□□□□ -1.77
USP16-205ENST00000474835 THP07101 528 aa4.01□□□□□ -1.77
USP16-205ENST00000474835 SULT1A3P0DMM9 295 aa4.01□□□□□ -1.77
USP16-205ENST00000474835 SULT1A4P0DMN0 295 aa4.01□□□□□ -1.77
USP16-205ENST00000474835 KRT3P12035 628 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms