RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 TRAF3Q13114 568 aa6.44□□□□□ -1.38
ATG4A-207ENST00000474825 GTF2H2Q13888 395 aa6.44□□□□□ -1.38
ATG4A-207ENST00000474825 LRP8Q14114 963 aa6.44□□□□□ -1.38
ATG4A-207ENST00000474825 NFE2L1Q14494 772 aa6.44□□□□□ -1.38
ATG4A-207ENST00000474825 ARHGAP19Q14CB8 494 aa6.44□□□□□ -1.38
ATG4A-207ENST00000474825 GGTA1PQ4G0N0 100 aa6.44□□□□□ -1.38
ATG4A-207ENST00000474825 GLIPR1L2Q4G1C9 344 aa6.44□□□□□ -1.38
ATG4A-207ENST00000474825 SYTL3Q4VX76 610 aa6.44□□□□□ -1.38
ATG4A-207ENST00000474825 TPRG1LQ5T0D9 272 aa6.44□□□□□ -1.38
ATG4A-207ENST00000474825 CWF19L1Q69YN2 538 aaKnown RBP6.44□□□□□ -1.38
ATG4A-207ENST00000474825 GTF2H2CQ6P1K8 395 aa6.44□□□□□ -1.38
ATG4A-207ENST00000474825 CHSY3Q70JA7 882 aa6.44□□□□□ -1.38
ATG4A-207ENST00000474825 LARP4Q71RC2 724 aaKnown RBP eCLIP6.44□□□□□ -1.38
ATG4A-207ENST00000474825 GOLGA7Q7Z5G4 137 aa6.44□□□□□ -1.38
ATG4A-207ENST00000474825 FAM124AQ86V42 546 aa6.44□□□□□ -1.38
ATG4A-207ENST00000474825 IQCHQ86VS3 1027 aa6.44□□□□□ -1.38
ATG4A-207ENST00000474825 DCP2Q8IU60 420 aaKnown RBP6.44□□□□□ -1.38
ATG4A-207ENST00000474825 RGL4Q8IZJ4 473 aa6.44□□□□□ -1.38
ATG4A-207ENST00000474825 CPSF7Q8N684 471 aaKnown RBP6.44□□□□□ -1.38
ATG4A-207ENST00000474825 GBP7Q8N8V2 638 aaPredicted RBP6.44□□□□□ -1.38
ATG4A-207ENST00000474825 FLCNQ8NFG4 579 aa6.44□□□□□ -1.38
ATG4A-207ENST00000474825 HMGCLL1Q8TB92 370 aa6.44□□□□□ -1.38
ATG4A-207ENST00000474825 MAGEC3Q8TD91 643 aa6.44□□□□□ -1.38
ATG4A-207ENST00000474825 DNASE2BQ8WZ79 361 aa6.44□□□□□ -1.38
ATG4A-207ENST00000474825 OR1E3Q8WZA6 343 aa6.44□□□□□ -1.38
ATG4A-207ENST00000474825 WDR34Q96EX3 536 aa6.44□□□□□ -1.38
ATG4A-207ENST00000474825 HIST1H2AHQ96KK5 128 aa6.44□□□□□ -1.38
ATG4A-207ENST00000474825 WDR92Q96MX6 357 aa6.44□□□□□ -1.38
ATG4A-207ENST00000474825 FOPNLQ96NB1 174 aa6.44□□□□□ -1.38
ATG4A-207ENST00000474825 HHIPQ96QV1 700 aa6.44□□□□□ -1.38
ATG4A-207ENST00000474825 INSM2Q96T92 566 aaPredicted RBP6.44□□□□□ -1.38
ATG4A-207ENST00000474825 HIST1H2AJQ99878 128 aa6.44□□□□□ -1.38
ATG4A-207ENST00000474825 H2AFJQ9BTM1 129 aa6.44□□□□□ -1.38
ATG4A-207ENST00000474825 HGH1Q9BTY7 390 aa6.44□□□□□ -1.38
ATG4A-207ENST00000474825 MENTQ9BUN1 341 aa6.44□□□□□ -1.38
ATG4A-207ENST00000474825 SGPP1Q9BX95 441 aa6.44□□□□□ -1.38
ATG4A-207ENST00000474825 ZNF385DQ9H6B1 395 aa6.44□□□□□ -1.38
ATG4A-207ENST00000474825 FZD3Q9NPG1 666 aa6.44□□□□□ -1.38
ATG4A-207ENST00000474825 ACSS2Q9NR19 701 aa6.44□□□□□ -1.38
ATG4A-207ENST00000474825 SAR1AQ9NR31 198 aa6.44□□□□□ -1.38
ATG4A-207ENST00000474825 ABCF3Q9NUQ8 709 aa6.44□□□□□ -1.38
ATG4A-207ENST00000474825 TRNAU1APQ9NX07 287 aaKnown RBP6.44□□□□□ -1.38
ATG4A-207ENST00000474825 ARL15Q9NXU5 204 aa6.44□□□□□ -1.38
ATG4A-207ENST00000474825 UTP6Q9NYH9 597 aaKnown RBP6.44□□□□□ -1.38
ATG4A-207ENST00000474825 HEY2Q9UBP5 337 aa6.44□□□□□ -1.38
ATG4A-207ENST00000474825 EIF2B4Q9UI10 523 aaKnown RBP6.44□□□□□ -1.38
ATG4A-207ENST00000474825 DCTN4Q9UJW0 460 aa6.44□□□□□ -1.38
ATG4A-207ENST00000474825 SUFUQ9UMX1 484 aa6.44□□□□□ -1.38
ATG4A-207ENST00000474825 CYP8B1Q9UNU6 501 aa6.44□□□□□ -1.38
ATG4A-207ENST00000474825 DNAJC15Q9Y5T4 150 aa6.44□□□□□ -1.38
ATG4A-207ENST00000474825 PIKFYVEQ9Y2I7 2098 aa6.44□□□□□ -1.38
ATG4A-207ENST00000474825 ATG2BQ96BY7 2078 aa6.43□□□□□ -1.38
ATG4A-207ENST00000474825 NUMA1Q14980 2115 aa6.43□□□□□ -1.38
ATG4A-207ENST00000474825 TECTAO75443 2155 aa6.43□□□□□ -1.38
ATG4A-207ENST00000474825 KCNE1BA0A087WTH5 132 aa6.43□□□□□ -1.38
ATG4A-207ENST00000474825 SPTY2D1-AS1A0A0U1RR47 76 aa6.43□□□□□ -1.38
ATG4A-207ENST00000474825 PRSS38A1L453 326 aa6.43□□□□□ -1.38
ATG4A-207ENST00000474825 PRR23AA6NEV1 266 aa6.43□□□□□ -1.38
ATG4A-207ENST00000474825 NCF1BA6NI72 391 aaPredicted RBP6.43□□□□□ -1.38
ATG4A-207ENST00000474825 TRPC5OSA6NMA1 111 aa6.43□□□□□ -1.38
ATG4A-207ENST00000474825 NCF1CA8MVU1 366 aaPredicted RBP6.43□□□□□ -1.38
ATG4A-207ENST00000474825 SLC22A2O15244 555 aa6.43□□□□□ -1.38
ATG4A-207ENST00000474825 UGDHO60701 494 aa6.43□□□□□ -1.38
ATG4A-207ENST00000474825 PRAMEF4O60810 478 aa6.43□□□□□ -1.38
ATG4A-207ENST00000474825 CCDC22O60826 627 aa6.43□□□□□ -1.38
ATG4A-207ENST00000474825 KATNA1O75449 491 aa6.43□□□□□ -1.38
ATG4A-207ENST00000474825 WDR47O94967 919 aa6.43□□□□□ -1.38
ATG4A-207ENST00000474825 SLC16A8O95907 504 aa6.43□□□□□ -1.38
ATG4A-207ENST00000474825 OTCP00480 354 aa6.43□□□□□ -1.38
ATG4A-207ENST00000474825 S100BP04271 92 aaPredicted RBP6.43□□□□□ -1.38
ATG4A-207ENST00000474825 JUNP05412 331 aaKnown RBP6.43□□□□□ -1.38
ATG4A-207ENST00000474825 ENO1P06733 434 aaKnown RBP6.43□□□□□ -1.38
ATG4A-207ENST00000474825 EBLN1P0CF75 366 aa6.43□□□□□ -1.38
ATG4A-207ENST00000474825 T-ENOLP0DO92 83 aa6.43□□□□□ -1.38
ATG4A-207ENST00000474825 KITP10721 976 aa6.43□□□□□ -1.38
ATG4A-207ENST00000474825 UROSP10746 265 aa6.43□□□□□ -1.38
ATG4A-207ENST00000474825 NCF1P14598 390 aaPredicted RBP6.43□□□□□ -1.38
ATG4A-207ENST00000474825 CD27P26842 260 aa6.43□□□□□ -1.38
ATG4A-207ENST00000474825 HTR1BP28222 390 aa6.43□□□□□ -1.38
ATG4A-207ENST00000474825 IMPA1P29218 277 aa6.43□□□□□ -1.38
ATG4A-207ENST00000474825 PRDX3P30048 256 aaKnown RBP6.43□□□□□ -1.38
ATG4A-207ENST00000474825 AVPR2P30518 371 aa6.43□□□□□ -1.38
ATG4A-207ENST00000474825 HSD17B2P37059 387 aa6.43□□□□□ -1.38
ATG4A-207ENST00000474825 HSPA7P48741 367 aa6.43□□□□□ -1.38
ATG4A-207ENST00000474825 FOXA1P55317 472 aa6.43□□□□□ -1.38
ATG4A-207ENST00000474825 BTKQ06187 659 aa6.43□□□□□ -1.38
ATG4A-207ENST00000474825 ZNF33BQ06732 778 aa6.43□□□□□ -1.38
ATG4A-207ENST00000474825 DMTNQ08495 405 aa6.43□□□□□ -1.38
ATG4A-207ENST00000474825 KRT72Q14CN4 511 aa6.43□□□□□ -1.38
ATG4A-207ENST00000474825 TBCCQ15814 346 aa6.43□□□□□ -1.38
ATG4A-207ENST00000474825 CYP2A13Q16696 494 aa6.43□□□□□ -1.38
ATG4A-207ENST00000474825 C18orf21Q32NC0 220 aaPredicted RBP6.43□□□□□ -1.38
ATG4A-207ENST00000474825 PTCHD3Q3KNS1 767 aa6.43□□□□□ -1.38
ATG4A-207ENST00000474825 CCSMST1Q4G0I0 132 aa6.43□□□□□ -1.38
ATG4A-207ENST00000474825 SLC9B1Q4ZJI4 515 aa6.43□□□□□ -1.38
ATG4A-207ENST00000474825 XKR7Q5GH72 579 aa6.43□□□□□ -1.38
ATG4A-207ENST00000474825 PRAMEF9Q5VWM5 478 aa6.43□□□□□ -1.38
ATG4A-207ENST00000474825 LETMD1Q6P1Q0 360 aa6.43□□□□□ -1.38
ATG4A-207ENST00000474825 AGTRAPQ6RW13 159 aa6.43□□□□□ -1.38
ATG4A-207ENST00000474825 CRTC3Q6UUV7 619 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms