RNA–Protein interactions for RNA: ENST00000474190.1

CASC3-204, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-204ENST00000474190 TMEM216Q9P0N5 145 aa10.06□□□□□ -0.8
CASC3-204ENST00000474190 TMEM9Q9P0T7 183 aa10.06□□□□□ -0.8
CASC3-204ENST00000474190 NOVA2Q9UNW9 492 aaKnown RBP10.06□□□□□ -0.8
CASC3-204ENST00000474190 DOLKQ9UPQ8 538 aa10.06□□□□□ -0.8
CASC3-204ENST00000474190 ACOT9Q9Y305 439 aa10.06□□□□□ -0.8
CASC3-204ENST00000474190 TDRD6O60522 2096 aaKnown RBP10.06□□□□□ -0.8
CASC3-204ENST00000474190 A0A087X1B8 175 aa10.05□□□□□ -0.8
CASC3-204ENST00000474190 IQANK1A0A1B0GTG1 560 aa10.05□□□□□ -0.8
CASC3-204ENST00000474190 SPAARA0A1B0GVQ0 90 aa10.05□□□□□ -0.8
CASC3-204ENST00000474190 A0A1W2PNU3 283 aaPredicted RBP10.05□□□□□ -0.8
CASC3-204ENST00000474190 F8W8V4 182 aa10.05□□□□□ -0.8
CASC3-204ENST00000474190 IFRD1O00458 451 aaPredicted RBP10.05□□□□□ -0.8
CASC3-204ENST00000474190 BTN3A1O00481 513 aa10.05□□□□□ -0.8
CASC3-204ENST00000474190 SLC16A5O15375 505 aa10.05□□□□□ -0.8
CASC3-204ENST00000474190 KLK8O60259 260 aa10.05□□□□□ -0.8
CASC3-204ENST00000474190 SLC16A8O95907 504 aa10.05□□□□□ -0.8
CASC3-204ENST00000474190 VIPP01282 170 aa10.05□□□□□ -0.8
CASC3-204ENST00000474190 MPOP05164 745 aa10.05□□□□□ -0.8
CASC3-204ENST00000474190 LTA4HP09960 611 aaKnown RBP10.05□□□□□ -0.8
CASC3-204ENST00000474190 ALPPL2P10696 532 aa10.05□□□□□ -0.8
CASC3-204ENST00000474190 TFEBP19484 476 aa10.05□□□□□ -0.8
CASC3-204ENST00000474190 IMPA1P29218 277 aa10.05□□□□□ -0.8
CASC3-204ENST00000474190 HALP42357 657 aa10.05□□□□□ -0.8
CASC3-204ENST00000474190 GPR3P46089 330 aa10.05□□□□□ -0.8
CASC3-204ENST00000474190 CCL7P80098 99 aa10.05□□□□□ -0.8
CASC3-204ENST00000474190 SP140Q13342 867 aa10.05□□□□□ -0.8
CASC3-204ENST00000474190 TRIP6Q15654 476 aaKnown RBP10.05□□□□□ -0.8
CASC3-204ENST00000474190 KRT71Q3SY84 523 aa10.05□□□□□ -0.8
CASC3-204ENST00000474190 TTMPQ5BVD1 217 aa10.05□□□□□ -0.8
CASC3-204ENST00000474190 CDCP2Q5VXM1 449 aa10.05□□□□□ -0.8
CASC3-204ENST00000474190 UBE2R2Q712K3 238 aaPredicted RBP10.05□□□□□ -0.8
CASC3-204ENST00000474190 RBM12BQ8IXT5 1001 aaKnown RBP10.05□□□□□ -0.8
CASC3-204ENST00000474190 C4orf33Q8N1A6 199 aa10.05□□□□□ -0.8
CASC3-204ENST00000474190 HMGCLL1Q8TB92 370 aa10.05□□□□□ -0.8
CASC3-204ENST00000474190 IFI44Q8TCB0 444 aa10.05□□□□□ -0.8
CASC3-204ENST00000474190 ACMSDQ8TDX5 336 aa10.05□□□□□ -0.8
CASC3-204ENST00000474190 FERD3LQ96RJ6 166 aa10.05□□□□□ -0.8
CASC3-204ENST00000474190 CCDC3Q9BQI4 270 aa10.05□□□□□ -0.8
CASC3-204ENST00000474190 NUDT22Q9BRQ3 303 aa10.05□□□□□ -0.8
CASC3-204ENST00000474190 VPS11Q9H270 941 aa10.05□□□□□ -0.8
CASC3-204ENST00000474190 ALG9Q9H6U8 611 aa10.05□□□□□ -0.8
CASC3-204ENST00000474190 SYNPO2LQ9H987 977 aa10.05□□□□□ -0.8
CASC3-204ENST00000474190 VIPAS39Q9H9C1 493 aa10.05□□□□□ -0.8
CASC3-204ENST00000474190 RDH14Q9HBH5 336 aa10.05□□□□□ -0.8
CASC3-204ENST00000474190 PARVBQ9HBI1 364 aa10.05□□□□□ -0.8
CASC3-204ENST00000474190 SYTL2Q9HCH5 934 aa10.05□□□□□ -0.8
CASC3-204ENST00000474190 PCMTD2Q9NV79 361 aa10.05□□□□□ -0.8
CASC3-204ENST00000474190 MKS1Q9NXB0 559 aa10.05□□□□□ -0.8
CASC3-204ENST00000474190 SEMA5BQ9P283 1151 aa10.05□□□□□ -0.8
CASC3-204ENST00000474190 STOX2Q9P2F5 926 aaPredicted RBP10.05□□□□□ -0.8
CASC3-204ENST00000474190 PDP2Q9P2J9 529 aa10.05□□□□□ -0.8
CASC3-204ENST00000474190 FTSJ1Q9UET6 329 aa10.05□□□□□ -0.8
CASC3-204ENST00000474190 OARD1Q9Y530 152 aa10.05□□□□□ -0.8
CASC3-204ENST00000474190 COL27A1Q8IZC6 1860 aaPredicted RBP10.04□□□□□ -0.8
CASC3-204ENST00000474190 IGKV1-8A0A0C4DH67 115 aa10.04□□□□□ -0.8
CASC3-204ENST00000474190 CPED1A4D0V7 1026 aa10.04□□□□□ -0.8
CASC3-204ENST00000474190 E7ENX8 843 aa10.04□□□□□ -0.8
CASC3-204ENST00000474190 PRAMEF4O60810 478 aa10.04□□□□□ -0.8
CASC3-204ENST00000474190 SYF2O95926 243 aaKnown RBP10.04□□□□□ -0.8
CASC3-204ENST00000474190 C9P02748 559 aa10.04□□□□□ -0.8
CASC3-204ENST00000474190 GP1BAP07359 652 aa10.04□□□□□ -0.8
CASC3-204ENST00000474190 C8GP07360 202 aa10.04□□□□□ -0.8
CASC3-204ENST00000474190 COL6A2P12110 1019 aa10.04□□□□□ -0.8
CASC3-204ENST00000474190 SLC2A4P14672 509 aa10.04□□□□□ -0.8
CASC3-204ENST00000474190 KRT4P19013 534 aa10.04□□□□□ -0.8
CASC3-204ENST00000474190 EPORP19235 508 aa10.04□□□□□ -0.8
CASC3-204ENST00000474190 NDUFS1P28331 727 aa10.04□□□□□ -0.8
CASC3-204ENST00000474190 GLRBP48167 497 aa10.04□□□□□ -0.8
CASC3-204ENST00000474190 RGS4P49798 205 aa10.04□□□□□ -0.8
CASC3-204ENST00000474190 EPHA4P54764 986 aa10.04□□□□□ -0.8
CASC3-204ENST00000474190 GFERP55789 205 aa10.04□□□□□ -0.8
CASC3-204ENST00000474190 ATP6V0D1P61421 351 aa10.04□□□□□ -0.8
CASC3-204ENST00000474190 TAP2Q03519 686 aa10.04□□□□□ -0.8
CASC3-204ENST00000474190 ACAP2Q15057 778 aa10.04□□□□□ -0.8
CASC3-204ENST00000474190 TGFBIQ15582 683 aa10.04□□□□□ -0.8
CASC3-204ENST00000474190 PRAMEF9Q5VWM5 478 aa10.04□□□□□ -0.8
CASC3-204ENST00000474190 C16orf46Q6P387 395 aa10.04□□□□□ -0.8
CASC3-204ENST00000474190 CCDC91Q7Z6B0 441 aa10.04□□□□□ -0.8
CASC3-204ENST00000474190 SLITRK4Q8IW52 837 aa10.04□□□□□ -0.8
CASC3-204ENST00000474190 KLHDC8AQ8IYD2 350 aa10.04□□□□□ -0.8
CASC3-204ENST00000474190 MYO1HQ8N1T3 1032 aa10.04□□□□□ -0.8
CASC3-204ENST00000474190 Q8N9G6 341 aaPredicted RBP10.04□□□□□ -0.8
CASC3-204ENST00000474190 OR4E2Q8NGC2 313 aa10.04□□□□□ -0.8
CASC3-204ENST00000474190 OR9A1PQ8NGU1 263 aa10.04□□□□□ -0.8
CASC3-204ENST00000474190 RHEBL1Q8TAI7 183 aa10.04□□□□□ -0.8
CASC3-204ENST00000474190 RHBDF1Q96CC6 855 aa10.04□□□□□ -0.8
CASC3-204ENST00000474190 CXorf40BQ96DE9 158 aa10.04□□□□□ -0.8
CASC3-204ENST00000474190 OR4K3Q96R72 315 aa10.04□□□□□ -0.8
CASC3-204ENST00000474190 TMEM79Q9BSE2 394 aa10.04□□□□□ -0.8
CASC3-204ENST00000474190 TRIT1Q9H3H1 467 aaKnown RBP10.04□□□□□ -0.8
CASC3-204ENST00000474190 PTBP2Q9UKA9 531 aaKnown RBP10.04□□□□□ -0.8
CASC3-204ENST00000474190 WASF3Q9UPY6 502 aa10.04□□□□□ -0.8
CASC3-204ENST00000474190 SH2B3Q9UQQ2 575 aa10.04□□□□□ -0.8
CASC3-204ENST00000474190 HEBP2Q9Y5Z4 205 aa10.04□□□□□ -0.8
CASC3-204ENST00000474190 IKBKGQ9Y6K9 419 aa10.04□□□□□ -0.8
CASC3-204ENST00000474190 FASNP49327 2511 aaKnown RBP10.04□□□□□ -0.8
CASC3-204ENST00000474190 SETXQ7Z333 2677 aaKnown RBP10.04□□□□□ -0.8
CASC3-204ENST00000474190 RP1P56715 2156 aa10.04□□□□□ -0.8
CASC3-204ENST00000474190 FREM2Q5SZK8 3169 aa10.04□□□□□ -0.8
CASC3-204ENST00000474190 OR5K3A6NET4 321 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms