RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, human

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNRNP40-204	ENST00000474025	NXPE1	Q8N323	547 aa		4.94	□□□□□ -1.62
SNRNP40-204	ENST00000474025	SLC25A41	Q8N5S1	370 aa		4.94	□□□□□ -1.62
SNRNP40-204	ENST00000474025	ZNF655	Q8N720	491 aa	Predicted RBP	4.94	□□□□□ -1.62
SNRNP40-204	ENST00000474025	BCORP1	Q8N888	145 aa		4.94	□□□□□ -1.62
SNRNP40-204	ENST00000474025	FLVCR1-AS1	Q8TAF5	88 aa		4.94	□□□□□ -1.62
SNRNP40-204	ENST00000474025	ZNF398	Q8TD17	642 aa		4.94	□□□□□ -1.62
SNRNP40-204	ENST00000474025	BLOC1S5	Q8TDH9	187 aa		4.94	□□□□□ -1.62
SNRNP40-204	ENST00000474025	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	4.94	□□□□□ -1.62
SNRNP40-204	ENST00000474025	N4BP2L2	Q92802	583 aa	Predicted RBP	4.94	□□□□□ -1.62
SNRNP40-204	ENST00000474025	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	4.94	□□□□□ -1.62
SNRNP40-204	ENST00000474025	FKBP10	Q96AY3	582 aa		4.94	□□□□□ -1.62
SNRNP40-204	ENST00000474025	CCDC120	Q96HB5	630 aa		4.94	□□□□□ -1.62
SNRNP40-204	ENST00000474025	OXNAD1	Q96HP4	312 aa	Predicted RBP	4.94	□□□□□ -1.62
SNRNP40-204	ENST00000474025	RBM41	Q96IZ5	413 aa	Known RBP	4.94	□□□□□ -1.62
SNRNP40-204	ENST00000474025	AGAP4	Q96P64	663 aa		4.94	□□□□□ -1.62
SNRNP40-204	ENST00000474025	FERD3L	Q96RJ6	166 aa		4.94	□□□□□ -1.62
SNRNP40-204	ENST00000474025	CCM2	Q9BSQ5	444 aa		4.94	□□□□□ -1.62
SNRNP40-204	ENST00000474025	HGH1	Q9BTY7	390 aa		4.94	□□□□□ -1.62
SNRNP40-204	ENST00000474025	LHPP	Q9H008	270 aa		4.94	□□□□□ -1.62
SNRNP40-204	ENST00000474025	SPRTN	Q9H040	489 aa	Predicted RBP	4.94	□□□□□ -1.62
SNRNP40-204	ENST00000474025	XKR8	Q9H6D3	395 aa		4.94	□□□□□ -1.62
SNRNP40-204	ENST00000474025	EPS8L2	Q9H6S3	715 aa		4.94	□□□□□ -1.62
SNRNP40-204	ENST00000474025	COG4	Q9H9E3	785 aa		4.94	□□□□□ -1.62
SNRNP40-204	ENST00000474025	SLC22A11	Q9NSA0	550 aa		4.94	□□□□□ -1.62
SNRNP40-204	ENST00000474025	OLAH	Q9NV23	265 aa		4.94	□□□□□ -1.62
SNRNP40-204	ENST00000474025	PGPEP1	Q9NXJ5	209 aa		4.94	□□□□□ -1.62
SNRNP40-204	ENST00000474025	ACTR10	Q9NZ32	417 aa		4.94	□□□□□ -1.62
SNRNP40-204	ENST00000474025	HACD3	Q9P035	362 aa		4.94	□□□□□ -1.62
SNRNP40-204	ENST00000474025	FKBPL	Q9UIM3	349 aa		4.94	□□□□□ -1.62
SNRNP40-204	ENST00000474025	ICK	Q9UPZ9	632 aa		4.94	□□□□□ -1.62
SNRNP40-204	ENST00000474025	HS3ST3B1	Q9Y662	390 aa		4.94	□□□□□ -1.62
SNRNP40-204	ENST00000474025	ARL5A	Q9Y689	179 aa		4.94	□□□□□ -1.62
SNRNP40-204	ENST00000474025	ACAN	P16112	2415 aa		4.94	□□□□□ -1.62
SNRNP40-204	ENST00000474025		A0A1B0GTH6	734 aa		4.93	□□□□□ -1.62
SNRNP40-204	ENST00000474025	C17orf113	A0A1B0GUU1	675 aa		4.93	□□□□□ -1.62
SNRNP40-204	ENST00000474025	LRRD1	A4D1F6	860 aa		4.93	□□□□□ -1.62
SNRNP40-204	ENST00000474025	AGAP14	A8MT82	685 aa		4.93	□□□□□ -1.62
SNRNP40-204	ENST00000474025	IFRD1	O00458	451 aa	Predicted RBP	4.93	□□□□□ -1.62
SNRNP40-204	ENST00000474025	APOL1	O14791	398 aa		4.93	□□□□□ -1.62
SNRNP40-204	ENST00000474025	STX7	O15400	261 aa	Known RBP	4.93	□□□□□ -1.62
SNRNP40-204	ENST00000474025	SRP72	O76094	671 aa	Known RBP	4.93	□□□□□ -1.62
SNRNP40-204	ENST00000474025	ONECUT2	O95948	504 aa		4.93	□□□□□ -1.62
SNRNP40-204	ENST00000474025	SERPING1	P05155	500 aa		4.93	□□□□□ -1.62
SNRNP40-204	ENST00000474025	SNRPB2	P08579	225 aa	Known RBP	4.93	□□□□□ -1.62
SNRNP40-204	ENST00000474025	COX6B1	P14854	86 aa		4.93	□□□□□ -1.62
SNRNP40-204	ENST00000474025	UGT2B7	P16662	529 aa		4.93	□□□□□ -1.62
SNRNP40-204	ENST00000474025	ZFX	P17010	805 aa	Predicted RBP	4.93	□□□□□ -1.62
SNRNP40-204	ENST00000474025	FLNA	P21333	2647 aa	Known RBP	4.93	□□□□□ -1.62
SNRNP40-204	ENST00000474025	PDHA2	P29803	388 aa		4.93	□□□□□ -1.62
SNRNP40-204	ENST00000474025	TNNT3	P45378	269 aa	Predicted RBP	4.93	□□□□□ -1.62
SNRNP40-204	ENST00000474025	CD151	P48509	253 aa		4.93	□□□□□ -1.62
SNRNP40-204	ENST00000474025	TMPRSS15	P98073	1019 aa		4.93	□□□□□ -1.62
SNRNP40-204	ENST00000474025	XIAP	P98170	497 aa		4.93	□□□□□ -1.62
SNRNP40-204	ENST00000474025		Q0VFX4	171 aa		4.93	□□□□□ -1.62
SNRNP40-204	ENST00000474025	RPA4	Q13156	261 aa		4.93	□□□□□ -1.62
SNRNP40-204	ENST00000474025	PRKG2	Q13237	762 aa		4.93	□□□□□ -1.62
SNRNP40-204	ENST00000474025	MFAP5	Q13361	173 aa		4.93	□□□□□ -1.62
SNRNP40-204	ENST00000474025	FIGN	Q5HY92	759 aa		4.93	□□□□□ -1.62
SNRNP40-204	ENST00000474025	IRAK1BP1	Q5VVH5	260 aa		4.93	□□□□□ -1.62
SNRNP40-204	ENST00000474025	RPUSD3	Q6P087	351 aa	Known RBP	4.93	□□□□□ -1.62
SNRNP40-204	ENST00000474025	ALKBH5	Q6P6C2	394 aa	Known RBP	4.93	□□□□□ -1.62
SNRNP40-204	ENST00000474025	TLDC1	Q6P9B6	456 aa		4.93	□□□□□ -1.62
SNRNP40-204	ENST00000474025	SASS6	Q6UVJ0	657 aa		4.93	□□□□□ -1.62
SNRNP40-204	ENST00000474025	LINC00696	Q6ZRV3	163 aa		4.93	□□□□□ -1.62
SNRNP40-204	ENST00000474025	COX15	Q7KZN9	410 aa		4.93	□□□□□ -1.62
SNRNP40-204	ENST00000474025	OVCH1	Q7RTY7	1134 aa		4.93	□□□□□ -1.62
SNRNP40-204	ENST00000474025	ZNF295-AS1	Q8N0V1	137 aa		4.93	□□□□□ -1.62
SNRNP40-204	ENST00000474025	DNAJC22	Q8N4W6	341 aa		4.93	□□□□□ -1.62
SNRNP40-204	ENST00000474025	ZNF808	Q8N4W9	903 aa	Predicted RBP	4.93	□□□□□ -1.62
SNRNP40-204	ENST00000474025	PHC3	Q8NDX5	983 aa		4.93	□□□□□ -1.62
SNRNP40-204	ENST00000474025	CATSPER1	Q8NEC5	780 aa		4.93	□□□□□ -1.62
SNRNP40-204	ENST00000474025	IPMK	Q8NFU5	416 aa		4.93	□□□□□ -1.62
SNRNP40-204	ENST00000474025	NR4A3	Q92570	626 aa		4.93	□□□□□ -1.62
SNRNP40-204	ENST00000474025	SYN2	Q92777	582 aa	Predicted RBP	4.93	□□□□□ -1.62
SNRNP40-204	ENST00000474025	NAP1L5	Q96NT1	182 aa	Predicted RBP	4.93	□□□□□ -1.62
SNRNP40-204	ENST00000474025	OR2A14	Q96R47	310 aa		4.93	□□□□□ -1.62
SNRNP40-204	ENST00000474025	TAAR6	Q96RI8	345 aa		4.93	□□□□□ -1.62
SNRNP40-204	ENST00000474025	MESP1	Q9BRJ9	268 aa		4.93	□□□□□ -1.62
SNRNP40-204	ENST00000474025	SLC26A1	Q9H2B4	701 aa		4.93	□□□□□ -1.62
SNRNP40-204	ENST00000474025	ALG2	Q9H553	416 aa		4.93	□□□□□ -1.62
SNRNP40-204	ENST00000474025	ASB8	Q9H765	288 aa		4.93	□□□□□ -1.62
SNRNP40-204	ENST00000474025	MVB12B	Q9H7P6	319 aa		4.93	□□□□□ -1.62
SNRNP40-204	ENST00000474025	WDR54	Q9H977	334 aa		4.93	□□□□□ -1.62
SNRNP40-204	ENST00000474025	MRM3	Q9HC36	420 aa	Known RBP	4.93	□□□□□ -1.62
SNRNP40-204	ENST00000474025	LMBRD1	Q9NUN5	540 aa		4.93	□□□□□ -1.62
SNRNP40-204	ENST00000474025	TXLNG	Q9NUQ3	528 aa		4.93	□□□□□ -1.62
SNRNP40-204	ENST00000474025	SPHK1	Q9NYA1	384 aa		4.93	□□□□□ -1.62
SNRNP40-204	ENST00000474025	CHMP5	Q9NZZ3	219 aa		4.93	□□□□□ -1.62
SNRNP40-204	ENST00000474025	CTTNBP2NL	Q9P2B4	639 aa		4.93	□□□□□ -1.62
SNRNP40-204	ENST00000474025	UVRAG	Q9P2Y5	699 aa		4.93	□□□□□ -1.62
SNRNP40-204	ENST00000474025	CDC23	Q9UJX2	597 aa		4.93	□□□□□ -1.62
SNRNP40-204	ENST00000474025	ITGB1BP2	Q9UKP3	347 aa		4.93	□□□□□ -1.62
SNRNP40-204	ENST00000474025	NENF	Q9UMX5	172 aa		4.93	□□□□□ -1.62
SNRNP40-204	ENST00000474025	BZW2	Q9Y6E2	419 aa	Known RBP	4.93	□□□□□ -1.62
SNRNP40-204	ENST00000474025	NSD1	Q96L73	2696 aa	Predicted RBP	4.93	□□□□□ -1.62
SNRNP40-204	ENST00000474025	CACNA1C	Q13936	2221 aa		4.93	□□□□□ -1.62
SNRNP40-204	ENST00000474025	SNRNP200	O75643	2136 aa	Known RBP	4.93	□□□□□ -1.62
SNRNP40-204	ENST00000474025	ANK3	Q12955	4377 aa	Known RBP	4.92	□□□□□ -1.62
SNRNP40-204	ENST00000474025	IGLV3-16	A0A075B6K0	115 aa		4.92	□□□□□ -1.62
SNRNP40-204	ENST00000474025	TRGV8	A0A0C4DH27	118 aa		4.92	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms