RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 TCEAL4Q96EI5 215 aa9.9□□□□□ -0.82
APTX-216ENST00000472896 P2RY11Q96G91 374 aa9.9□□□□□ -0.82
APTX-216ENST00000472896 CSPG4P5Q96PW8 444 aa9.9□□□□□ -0.82
APTX-216ENST00000472896 APOL4Q9BPW4 351 aa9.9□□□□□ -0.82
APTX-216ENST00000472896 CCDC32Q9BV29 185 aa9.9□□□□□ -0.82
APTX-216ENST00000472896 NTN4Q9HB63 628 aa9.9□□□□□ -0.82
APTX-216ENST00000472896 RXFP3Q9NSD7 469 aa9.9□□□□□ -0.82
APTX-216ENST00000472896 TMEM45AQ9NWC5 275 aa9.9□□□□□ -0.82
APTX-216ENST00000472896 C2orf42Q9NWW7 574 aa9.9□□□□□ -0.82
APTX-216ENST00000472896 GDE1Q9NZC3 331 aa9.9□□□□□ -0.82
APTX-216ENST00000472896 IL37Q9NZH6 218 aa9.9□□□□□ -0.82
APTX-216ENST00000472896 RABL2AQ9UBK7 228 aaPredicted RBP9.9□□□□□ -0.82
APTX-216ENST00000472896 OPTCQ9UBM4 332 aa9.9□□□□□ -0.82
APTX-216ENST00000472896 VWA8A3KMH1 1905 aa9.89□□□□□ -0.83
APTX-216ENST00000472896 MAN2B1O00754 1011 aa9.89□□□□□ -0.83
APTX-216ENST00000472896 PTGESO14684 152 aa9.89□□□□□ -0.83
APTX-216ENST00000472896 SLC16A6O15403 523 aa9.89□□□□□ -0.83
APTX-216ENST00000472896 CAPN5O15484 640 aaPredicted RBP9.89□□□□□ -0.83
APTX-216ENST00000472896 PSMD3O43242 534 aa9.89□□□□□ -0.83
APTX-216ENST00000472896 VPS4BO75351 444 aa9.89□□□□□ -0.83
APTX-216ENST00000472896 PCNAP12004 261 aa9.89□□□□□ -0.83
APTX-216ENST00000472896 ARL4AP40617 200 aa9.89□□□□□ -0.83
APTX-216ENST00000472896 ETV6P41212 452 aa9.89□□□□□ -0.83
APTX-216ENST00000472896 ATRXP46100 2492 aa9.89□□□□□ -0.83
APTX-216ENST00000472896 RPS5P46782 204 aaKnown RBP9.89□□□□□ -0.83
APTX-216ENST00000472896 CXCL12P48061 93 aa9.89□□□□□ -0.83
APTX-216ENST00000472896 GLRBP48167 497 aa9.89□□□□□ -0.83
APTX-216ENST00000472896 TUFMP49411 452 aaKnown RBP9.89□□□□□ -0.83
APTX-216ENST00000472896 TAGLNQ01995 201 aaKnown RBP9.89□□□□□ -0.83
APTX-216ENST00000472896 TUSC3Q13454 348 aa9.89□□□□□ -0.83
APTX-216ENST00000472896 SF3A2Q15428 464 aaKnown RBP9.89□□□□□ -0.83
APTX-216ENST00000472896 SMU1Q2TAY7 513 aa9.89□□□□□ -0.83
APTX-216ENST00000472896 CTU2Q2VPK5 515 aaKnown RBP9.89□□□□□ -0.83
APTX-216ENST00000472896 RAB6CQ53S08 254 aa9.89□□□□□ -0.83
APTX-216ENST00000472896 SNAP47Q5SQN1 464 aa9.89□□□□□ -0.83
APTX-216ENST00000472896 CD300LGQ6UXG3 332 aa9.89□□□□□ -0.83
APTX-216ENST00000472896 STK32CQ86UX6 486 aa9.89□□□□□ -0.83
APTX-216ENST00000472896 CNTN4Q8IWV2 1026 aa9.89□□□□□ -0.83
APTX-216ENST00000472896 CACTIN-AS1Q8N1I8 211 aa9.89□□□□□ -0.83
APTX-216ENST00000472896 AMER2Q8N7J2 671 aa9.89□□□□□ -0.83
APTX-216ENST00000472896 BEND7Q8N7W2 519 aaPredicted RBP9.89□□□□□ -0.83
APTX-216ENST00000472896 PSD4Q8NDX1 1056 aa9.89□□□□□ -0.83
APTX-216ENST00000472896 TOR1AIP2Q8NFQ8 470 aa9.89□□□□□ -0.83
APTX-216ENST00000472896 GABPB2Q8TAK5 448 aaPredicted RBP9.89□□□□□ -0.83
APTX-216ENST00000472896 FAM3CQ92520 227 aa9.89□□□□□ -0.83
APTX-216ENST00000472896 POP5Q969H6 163 aaKnown RBP9.89□□□□□ -0.83
APTX-216ENST00000472896 CEP295NLQ96MC4 621 aa9.89□□□□□ -0.83
APTX-216ENST00000472896 NSMCE2Q96MF7 247 aa9.89□□□□□ -0.83
APTX-216ENST00000472896 ZSWIM3Q96MP5 696 aa9.89□□□□□ -0.83
APTX-216ENST00000472896 RNF145Q96MT1 663 aa9.89□□□□□ -0.83
APTX-216ENST00000472896 MBOAT4Q96T53 435 aa9.89□□□□□ -0.83
APTX-216ENST00000472896 CCDC90BQ9GZT6 254 aa9.89□□□□□ -0.83
APTX-216ENST00000472896 RAB6CQ9H0N0 254 aa9.89□□□□□ -0.83
APTX-216ENST00000472896 C2orf40Q9H1Z8 148 aa9.89□□□□□ -0.83
APTX-216ENST00000472896 BRD9Q9H8M2 597 aa9.89□□□□□ -0.83
APTX-216ENST00000472896 SYTL2Q9HCH5 934 aa9.89□□□□□ -0.83
APTX-216ENST00000472896 RPRD1BQ9NQG5 326 aaKnown RBP9.89□□□□□ -0.83
APTX-216ENST00000472896 ACSS2Q9NR19 701 aa9.89□□□□□ -0.83
APTX-216ENST00000472896 ADPRHL2Q9NX46 363 aa9.89□□□□□ -0.83
APTX-216ENST00000472896 SCN3BQ9NY72 215 aa9.89□□□□□ -0.83
APTX-216ENST00000472896 CCDC59Q9P031 241 aaKnown RBP9.89□□□□□ -0.83
APTX-216ENST00000472896 C3orf18Q9UK00 162 aa9.89□□□□□ -0.83
APTX-216ENST00000472896 FBXO9Q9UK97 447 aaPredicted RBP9.89□□□□□ -0.83
APTX-216ENST00000472896 NUP50Q9UKX7 468 aa9.89□□□□□ -0.83
APTX-216ENST00000472896 PEX16Q9Y5Y5 336 aa9.89□□□□□ -0.83
APTX-216ENST00000472896 G3V2T6 193 aa9.88□□□□□ -0.83
APTX-216ENST00000472896 K7ESF4 209 aa9.88□□□□□ -0.83
APTX-216ENST00000472896 OGTO15294 1046 aa9.88□□□□□ -0.83
APTX-216ENST00000472896 CILPO75339 1184 aa9.88□□□□□ -0.83
APTX-216ENST00000472896 PRKD3O94806 890 aa9.88□□□□□ -0.83
APTX-216ENST00000472896 IPO13O94829 963 aaKnown RBP9.88□□□□□ -0.83
APTX-216ENST00000472896 RBP1P09455 135 aa9.88□□□□□ -0.83
APTX-216ENST00000472896 MTHFD1P11586 935 aaKnown RBP9.88□□□□□ -0.83
APTX-216ENST00000472896 CHRM3P20309 590 aa9.88□□□□□ -0.83
APTX-216ENST00000472896 CAPN3P20807 821 aa9.88□□□□□ -0.83
APTX-216ENST00000472896 ARL2P36404 184 aa9.88□□□□□ -0.83
APTX-216ENST00000472896 CCR2P41597 374 aa9.88□□□□□ -0.83
APTX-216ENST00000472896 OR3A3P47888 321 aa9.88□□□□□ -0.83
APTX-216ENST00000472896 SEPHS1P49903 392 aa9.88□□□□□ -0.83
APTX-216ENST00000472896 ISL1P61371 349 aa9.88□□□□□ -0.83
APTX-216ENST00000472896 RACK1P63244 317 aaKnown RBP9.88□□□□□ -0.83
APTX-216ENST00000472896 CTAG1AP78358 180 aa9.88□□□□□ -0.83
APTX-216ENST00000472896 TSPY1Q01534 308 aa9.88□□□□□ -0.83
APTX-216ENST00000472896 SLC6A3Q01959 620 aa9.88□□□□□ -0.83
APTX-216ENST00000472896 CHRNB3Q05901 458 aa9.88□□□□□ -0.83
APTX-216ENST00000472896 CAPSQ13938 189 aa9.88□□□□□ -0.83
APTX-216ENST00000472896 STARD3Q14849 445 aa9.88□□□□□ -0.83
APTX-216ENST00000472896 CLCA4Q14CN2 919 aa9.88□□□□□ -0.83
APTX-216ENST00000472896 C5orf22Q49AR2 442 aa9.88□□□□□ -0.83
APTX-216ENST00000472896 PRSS36Q5K4E3 855 aa9.88□□□□□ -0.83
APTX-216ENST00000472896 COLEC12Q5KU26 742 aa9.88□□□□□ -0.83
APTX-216ENST00000472896 LCLAT1Q6UWP7 414 aa9.88□□□□□ -0.83
APTX-216ENST00000472896 ZNF567Q8N184 647 aa9.88□□□□□ -0.83
APTX-216ENST00000472896 FAM160A2Q8N612 972 aaPredicted RBP9.88□□□□□ -0.83
APTX-216ENST00000472896 OR9I1Q8NGQ6 314 aa9.88□□□□□ -0.83
APTX-216ENST00000472896 MCOLN3Q8TDD5 553 aa9.88□□□□□ -0.83
APTX-216ENST00000472896 LRRN4Q8WUT4 740 aa9.88□□□□□ -0.83
APTX-216ENST00000472896 SGCDQ92629 289 aa9.88□□□□□ -0.83
APTX-216ENST00000472896 FCGR1BQ92637 280 aa9.88□□□□□ -0.83
APTX-216ENST00000472896 CENPIQ92674 756 aaPredicted RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms