RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 PRDM8Q9NQV8 689 aa8.92□□□□□ -0.98
SMC4-213ENST00000472282 FBXO6Q9NRD1 293 aaPredicted RBP8.92□□□□□ -0.98
SMC4-213ENST00000472282 SLC17A6Q9P2U8 582 aa8.92□□□□□ -0.98
SMC4-213ENST00000472282 FBXO5Q9UKT4 447 aa8.92□□□□□ -0.98
SMC4-213ENST00000472282 FASNP49327 2511 aaKnown RBP8.92□□□□□ -0.98
SMC4-213ENST00000472282 AHCTF1Q8WYP5 2266 aa8.92□□□□□ -0.98
SMC4-213ENST00000472282 SMG1Q96Q15 3661 aaKnown RBP8.91□□□□□ -0.98
SMC4-213ENST00000472282 COL6A6A6NMZ7 2263 aa8.91□□□□□ -0.98
SMC4-213ENST00000472282 A8MU76 341 aa8.91□□□□□ -0.98
SMC4-213ENST00000472282 PDZK1P1A8MUH7 402 aa8.91□□□□□ -0.98
SMC4-213ENST00000472282 PYCARD-AS1I3L0S3 204 aa8.91□□□□□ -0.98
SMC4-213ENST00000472282 QSOX1O00391 747 aa8.91□□□□□ -0.98
SMC4-213ENST00000472282 HGSO14964 777 aaPredicted RBP8.91□□□□□ -0.98
SMC4-213ENST00000472282 PFDN6O15212 129 aa8.91□□□□□ -0.98
SMC4-213ENST00000472282 AP2A2O94973 939 aa8.91□□□□□ -0.98
SMC4-213ENST00000472282 FTH1P02794 183 aa8.91□□□□□ -0.98
SMC4-213ENST00000472282 PLA2G2AP14555 144 aa8.91□□□□□ -0.98
SMC4-213ENST00000472282 ITGB6P18564 788 aa8.91□□□□□ -0.98
SMC4-213ENST00000472282 IDSP22304 550 aa8.91□□□□□ -0.98
SMC4-213ENST00000472282 RPS3P23396 243 aaKnown RBP eCLIP8.91□□□□□ -0.987e-64■■■■■ 337.8
SMC4-213ENST00000472282 RPL10P27635 214 aaKnown RBP8.91□□□□□ -0.98
SMC4-213ENST00000472282 FMO4P31512 558 aa8.91□□□□□ -0.98
SMC4-213ENST00000472282 CLCNKAP51800 687 aa8.91□□□□□ -0.98
SMC4-213ENST00000472282 CYP4F2P78329 520 aa8.91□□□□□ -0.98
SMC4-213ENST00000472282 HHEXQ03014 270 aa8.91□□□□□ -0.98
SMC4-213ENST00000472282 DMPKQ09013 629 aa8.91□□□□□ -0.98
SMC4-213ENST00000472282 SQSTM1Q13501 440 aa8.91□□□□□ -0.98
SMC4-213ENST00000472282 BOP1Q14137 746 aaKnown RBP8.91□□□□□ -0.98
SMC4-213ENST00000472282 CTSL3PQ5NE16 218 aa8.91□□□□□ -0.98
SMC4-213ENST00000472282 SNAP47Q5SQN1 464 aa8.91□□□□□ -0.98
SMC4-213ENST00000472282 PTRHD1Q6GMV3 140 aaKnown RBP8.91□□□□□ -0.98
SMC4-213ENST00000472282 TMEM71Q6P5X7 295 aa8.91□□□□□ -0.98
SMC4-213ENST00000472282 IYDQ6PHW0 289 aa8.91□□□□□ -0.98
SMC4-213ENST00000472282 XKR5Q6UX68 686 aa8.91□□□□□ -0.98
SMC4-213ENST00000472282 GSPT2Q8IYD1 628 aaKnown RBP8.91□□□□□ -0.98
SMC4-213ENST00000472282 KRT222Q8N1A0 295 aa8.91□□□□□ -0.98
SMC4-213ENST00000472282 LILRA3Q8N6C8 439 aaPredicted RBP8.91□□□□□ -0.98
SMC4-213ENST00000472282 BMPERQ8N8U9 685 aa8.91□□□□□ -0.98
SMC4-213ENST00000472282 EXD3Q8N9H8 876 aa8.91□□□□□ -0.98
SMC4-213ENST00000472282 OR4D9Q8NGE8 314 aa8.91□□□□□ -0.98
SMC4-213ENST00000472282 OR2L2Q8NH16 312 aa8.91□□□□□ -0.98
SMC4-213ENST00000472282 GABPB2Q8TAK5 448 aaPredicted RBP8.91□□□□□ -0.98
SMC4-213ENST00000472282 TMEM159Q96B96 161 aa8.91□□□□□ -0.98
SMC4-213ENST00000472282 RNF31Q96EP0 1072 aa8.91□□□□□ -0.98
SMC4-213ENST00000472282 TCF12Q99081 682 aa8.91□□□□□ -0.98
SMC4-213ENST00000472282 SLC38A3Q99624 504 aa8.91□□□□□ -0.98
SMC4-213ENST00000472282 CCM2Q9BSQ5 444 aa8.91□□□□□ -0.98
SMC4-213ENST00000472282 TBC1D10AQ9BXI6 508 aa8.91□□□□□ -0.98
SMC4-213ENST00000472282 P2RY12Q9H244 342 aa8.91□□□□□ -0.98
SMC4-213ENST00000472282 COG4Q9H9E3 785 aa8.91□□□□□ -0.98
SMC4-213ENST00000472282 VPS37BQ9H9H4 285 aa8.91□□□□□ -0.98
SMC4-213ENST00000472282 INTS10Q9NVR2 710 aaKnown RBP8.91□□□□□ -0.98
SMC4-213ENST00000472282 GNPTGQ9UJJ9 305 aa8.91□□□□□ -0.98
SMC4-213ENST00000472282 NFU1Q9UMS0 254 aa8.91□□□□□ -0.98
SMC4-213ENST00000472282 PSMD13Q9UNM6 376 aa8.91□□□□□ -0.98
SMC4-213ENST00000472282 CRYL1Q9Y2S2 319 aa8.91□□□□□ -0.98
SMC4-213ENST00000472282 B3GALT1Q9Y5Z6 326 aa8.91□□□□□ -0.98
SMC4-213ENST00000472282 IQCF5A8MTL0 148 aa8.9□□□□□ -0.98
SMC4-213ENST00000472282 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.9□□□□□ -0.98
SMC4-213ENST00000472282 F8W8V4 182 aa8.9□□□□□ -0.98
SMC4-213ENST00000472282 KCNJ13O60928 360 aa8.9□□□□□ -0.98
SMC4-213ENST00000472282 NIPSNAP2O75323 286 aa8.9□□□□□ -0.98
SMC4-213ENST00000472282 F3P13726 295 aa8.9□□□□□ -0.98
SMC4-213ENST00000472282 BRAFP15056 766 aa8.9□□□□□ -0.98
SMC4-213ENST00000472282 MAPK9P45984 424 aa8.9□□□□□ -0.98
SMC4-213ENST00000472282 PREPP48147 710 aa8.9□□□□□ -0.98
SMC4-213ENST00000472282 CSE1LP55060 971 aaKnown RBP8.9□□□□□ -0.98
SMC4-213ENST00000472282 GPX6P59796 221 aa8.9□□□□□ -0.98
SMC4-213ENST00000472282 MGAT5Q09328 741 aa8.9□□□□□ -0.98
SMC4-213ENST00000472282 TRA2AQ13595 282 aaKnown RBP eCLIP8.9□□□□□ -0.98
SMC4-213ENST00000472282 FRG1Q14331 258 aaKnown RBP8.9□□□□□ -0.98
SMC4-213ENST00000472282 BRD3Q15059 726 aa8.9□□□□□ -0.98
SMC4-213ENST00000472282 CLPPQ16740 277 aaPredicted RBP8.9□□□□□ -0.98
SMC4-213ENST00000472282 ZNF658BQ4V348 819 aaPredicted RBP8.9□□□□□ -0.98
SMC4-213ENST00000472282 MANEAQ5SRI9 462 aa8.9□□□□□ -0.98
SMC4-213ENST00000472282 UBAP2Q5T6F2 1119 aaKnown RBP8.9□□□□□ -0.98
SMC4-213ENST00000472282 TEDDM1Q5T9Z0 273 aa8.9□□□□□ -0.98
SMC4-213ENST00000472282 ANKS6Q68DC2 871 aa8.9□□□□□ -0.98
SMC4-213ENST00000472282 CNSTQ6PJW8 725 aa8.9□□□□□ -0.98
SMC4-213ENST00000472282 NAPRTQ6XQN6 538 aa8.9□□□□□ -0.98
SMC4-213ENST00000472282 CEP128Q6ZU80 1094 aa8.9□□□□□ -0.98
SMC4-213ENST00000472282 LRRC6Q86X45 466 aa8.9□□□□□ -0.98
SMC4-213ENST00000472282 CNTN4Q8IWV2 1026 aa8.9□□□□□ -0.98
SMC4-213ENST00000472282 CFAP206Q8IYR0 622 aa8.9□□□□□ -0.98
SMC4-213ENST00000472282 C2CD4AQ8NCU7 369 aaPredicted RBP8.9□□□□□ -0.98
SMC4-213ENST00000472282 ELMO1Q92556 727 aa8.9□□□□□ -0.98
SMC4-213ENST00000472282 EXTL1Q92935 676 aa8.9□□□□□ -0.98
SMC4-213ENST00000472282 NKD1Q969G9 470 aa8.9□□□□□ -0.98
SMC4-213ENST00000472282 WBP1Q96G27 269 aa8.9□□□□□ -0.98
SMC4-213ENST00000472282 RMDN2Q96LZ7 410 aa8.9□□□□□ -0.98
SMC4-213ENST00000472282 BIRC8Q96P09 236 aa8.9□□□□□ -0.98
SMC4-213ENST00000472282 TAAR9Q96RI9 348 aa8.9□□□□□ -0.98
SMC4-213ENST00000472282 CTRCQ99895 268 aa8.9□□□□□ -0.98
SMC4-213ENST00000472282 TSSK1BQ9BXA7 367 aa8.9□□□□□ -0.98
SMC4-213ENST00000472282 WWP1Q9H0M0 922 aa8.9□□□□□ -0.98
SMC4-213ENST00000472282 CDC42EP4Q9H3Q1 356 aaKnown RBP8.9□□□□□ -0.98
SMC4-213ENST00000472282 ANKZF1Q9H8Y5 726 aa8.9□□□□□ -0.98
SMC4-213ENST00000472282 APMAPQ9HDC9 416 aa8.9□□□□□ -0.98
SMC4-213ENST00000472282 SARS2Q9NP81 518 aaKnown RBP8.9□□□□□ -0.98
SMC4-213ENST00000472282 NINJ2Q9NZG7 142 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms