RNA–Protein interactions for RNA: ENST00000472116.1

CDHR3-209, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 993 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-209ENST00000472116 LONRF2Q1L5Z9 754 aa9.8□□□□□ -0.84
CDHR3-209ENST00000472116 LDLRAP1Q5SW96 308 aa9.8□□□□□ -0.84
CDHR3-209ENST00000472116 ATG9BQ674R7 924 aa9.8□□□□□ -0.84
CDHR3-209ENST00000472116 TXNRD3NBQ6F5E7 133 aa9.8□□□□□ -0.84
CDHR3-209ENST00000472116 TIGD7Q6NT04 549 aaPredicted RBP9.8□□□□□ -0.84
CDHR3-209ENST00000472116 SARM1Q6SZW1 724 aa9.8□□□□□ -0.84
CDHR3-209ENST00000472116 SPESP1Q6UW49 350 aa9.8□□□□□ -0.84
CDHR3-209ENST00000472116 C16orf47Q6ZP98 133 aaPredicted RBP9.8□□□□□ -0.84
CDHR3-209ENST00000472116 AMIGO1Q86WK6 493 aa9.8□□□□□ -0.84
CDHR3-209ENST00000472116 TEX26Q8N6G2 289 aa9.8□□□□□ -0.84
CDHR3-209ENST00000472116 TMEM178AQ8NBL3 297 aa9.8□□□□□ -0.84
CDHR3-209ENST00000472116 RBM41Q96IZ5 413 aaKnown RBP9.8□□□□□ -0.84
CDHR3-209ENST00000472116 COX4I2Q96KJ9 171 aa9.8□□□□□ -0.84
CDHR3-209ENST00000472116 FERD3LQ96RJ6 166 aa9.8□□□□□ -0.84
CDHR3-209ENST00000472116 KLHL1Q9NR64 748 aa9.8□□□□□ -0.84
CDHR3-209ENST00000472116 SLC22A11Q9NSA0 550 aa9.8□□□□□ -0.84
CDHR3-209ENST00000472116 IL1RAPL1Q9NZN1 696 aa9.8□□□□□ -0.84
CDHR3-209ENST00000472116 CWC15Q9P013 229 aaKnown RBP9.8□□□□□ -0.84
CDHR3-209ENST00000472116 AMACRQ9UHK6 382 aa9.8□□□□□ -0.84
CDHR3-209ENST00000472116 MKL2Q9ULH7 1088 aa9.8□□□□□ -0.84
CDHR3-209ENST00000472116 MGAT4DA6NG13 374 aa9.79□□□□□ -0.84
CDHR3-209ENST00000472116 H3BMH7 237 aa9.79□□□□□ -0.84
CDHR3-209ENST00000472116 RASGRF2O14827 1237 aa9.79□□□□□ -0.84
CDHR3-209ENST00000472116 DSCR3O14972 297 aa9.79□□□□□ -0.84
CDHR3-209ENST00000472116 WISP2O76076 250 aa9.79□□□□□ -0.84
CDHR3-209ENST00000472116 ICAM2P13598 275 aa9.79□□□□□ -0.84
CDHR3-209ENST00000472116 CD46P15529 392 aa9.79□□□□□ -0.84
CDHR3-209ENST00000472116 UGT1A1P22309 533 aa9.79□□□□□ -0.84
CDHR3-209ENST00000472116 PSMA2P25787 234 aa9.79□□□□□ -0.84
CDHR3-209ENST00000472116 AKT1P31749 480 aa9.79□□□□□ -0.84
CDHR3-209ENST00000472116 PEX19P40855 299 aa9.79□□□□□ -0.84
CDHR3-209ENST00000472116 KIR2DL3P43628 341 aa9.79□□□□□ -0.84
CDHR3-209ENST00000472116 RPL7AP62424 266 aaKnown RBP9.79□□□□□ -0.84
CDHR3-209ENST00000472116 FANCCQ00597 558 aa9.79□□□□□ -0.84
CDHR3-209ENST00000472116 HSF1Q00613 529 aa9.79□□□□□ -0.84
CDHR3-209ENST00000472116 DPYSQ14117 519 aa9.79□□□□□ -0.84
CDHR3-209ENST00000472116 ATP13A5Q4VNC0 1218 aa9.79□□□□□ -0.84
CDHR3-209ENST00000472116 FNBP1LQ5T0N5 605 aa9.79□□□□□ -0.84
CDHR3-209ENST00000472116 ALG1LQ6GMV1 187 aa9.79□□□□□ -0.84
CDHR3-209ENST00000472116 ARSKQ6UWY0 536 aa9.79□□□□□ -0.84
CDHR3-209ENST00000472116 NEK10Q6ZWH5 1172 aa9.79□□□□□ -0.84
CDHR3-209ENST00000472116 CD163Q86VB7 1156 aa9.79□□□□□ -0.84
CDHR3-209ENST00000472116 LRRC49Q8IUZ0 686 aa9.79□□□□□ -0.84
CDHR3-209ENST00000472116 PSTKQ8IV42 348 aaKnown RBP9.79□□□□□ -0.84
CDHR3-209ENST00000472116 RASGEF1AQ8N9B8 481 aa9.79□□□□□ -0.84
CDHR3-209ENST00000472116 ARMC2Q8NEN0 867 aa9.79□□□□□ -0.84
CDHR3-209ENST00000472116 HDAC10Q969S8 669 aa9.79□□□□□ -0.84
CDHR3-209ENST00000472116 MIEF2Q96C03 454 aa9.79□□□□□ -0.84
CDHR3-209ENST00000472116 C8orf44Q96CB5 159 aa9.79□□□□□ -0.84
CDHR3-209ENST00000472116 CCM2Q9BSQ5 444 aa9.79□□□□□ -0.84
CDHR3-209ENST00000472116 CHRNA10Q9GZZ6 450 aa9.79□□□□□ -0.84
CDHR3-209ENST00000472116 RBM22Q9NW64 420 aaKnown RBP eCLIP9.79□□□□□ -0.84
CDHR3-209ENST00000472116 CTSFQ9UBX1 484 aa9.79□□□□□ -0.84
CDHR3-209ENST00000472116 C3orf18Q9UK00 162 aa9.79□□□□□ -0.84
CDHR3-209ENST00000472116 ZNF711Q9Y462 761 aa9.79□□□□□ -0.84
CDHR3-209ENST00000472116 L3MBTL1Q9Y468 752 aa9.79□□□□□ -0.84
CDHR3-209ENST00000472116 F8VZ95 297 aa9.78□□□□□ -0.84
CDHR3-209ENST00000472116 H7C1Q1 480 aa9.78□□□□□ -0.84
CDHR3-209ENST00000472116 IFRD1O00458 451 aaPredicted RBP9.78□□□□□ -0.84
CDHR3-209ENST00000472116 SMAD7O15105 426 aaKnown RBP9.78□□□□□ -0.84
CDHR3-209ENST00000472116 ATE1O95260 518 aa9.78□□□□□ -0.84
CDHR3-209ENST00000472116 POLBP06746 335 aa9.78□□□□□ -0.84
CDHR3-209ENST00000472116 COX6A1P12074 109 aa9.78□□□□□ -0.84
CDHR3-209ENST00000472116 ZNF24P17028 368 aa9.78□□□□□ -0.84
CDHR3-209ENST00000472116 MSH3P20585 1137 aa9.78□□□□□ -0.84
CDHR3-209ENST00000472116 AMPD1P23109 780 aa9.78□□□□□ -0.84
CDHR3-209ENST00000472116 PTGS2P35354 604 aa9.78□□□□□ -0.84
CDHR3-209ENST00000472116 FMO1Q01740 532 aa9.78□□□□□ -0.84
CDHR3-209ENST00000472116 EEF1A2Q05639 463 aaKnown RBP9.78□□□□□ -0.84
CDHR3-209ENST00000472116 KLC1Q07866 573 aa9.78□□□□□ -0.84
CDHR3-209ENST00000472116 PTP4A2Q12974 167 aa9.78□□□□□ -0.84
CDHR3-209ENST00000472116 PCBP2Q15366 365 aaKnown RBP eCLIP9.78□□□□□ -0.84
CDHR3-209ENST00000472116 PPP2R5EQ16537 467 aa9.78□□□□□ -0.84
CDHR3-209ENST00000472116 YOD1Q5VVQ6 348 aaPredicted RBP9.78□□□□□ -0.84
CDHR3-209ENST00000472116 CCDC70Q6NSX1 233 aa9.78□□□□□ -0.84
CDHR3-209ENST00000472116 PODNL1Q6PEZ8 512 aa9.78□□□□□ -0.84
CDHR3-209ENST00000472116 ACAD11Q709F0 780 aa9.78□□□□□ -0.84
CDHR3-209ENST00000472116 TMC3Q7Z5M5 1100 aa9.78□□□□□ -0.84
CDHR3-209ENST00000472116 TRIM73Q86UV7 250 aa9.78□□□□□ -0.84
CDHR3-209ENST00000472116 PHF13Q86YI8 300 aaPredicted RBP9.78□□□□□ -0.84
CDHR3-209ENST00000472116 P3H2Q8IVL5 708 aa9.78□□□□□ -0.84
CDHR3-209ENST00000472116 PRSS58Q8IYP2 241 aa9.78□□□□□ -0.84
CDHR3-209ENST00000472116 HORMAD2Q8N7B1 307 aa9.78□□□□□ -0.84
CDHR3-209ENST00000472116 TTC29Q8NA56 475 aaPredicted RBP9.78□□□□□ -0.84
CDHR3-209ENST00000472116 OR52E1Q8NGJ3 308 aa9.78□□□□□ -0.84
CDHR3-209ENST00000472116 FAM57AQ8TBR7 257 aa9.78□□□□□ -0.84
CDHR3-209ENST00000472116 RMDN2Q96LZ7 410 aa9.78□□□□□ -0.84
CDHR3-209ENST00000472116 SRPK1Q96SB4 655 aaKnown RBP9.78□□□□□ -0.84
CDHR3-209ENST00000472116 TRIM51Q9BSJ1 452 aa9.78□□□□□ -0.84
CDHR3-209ENST00000472116 BDH2Q9BUT1 245 aa9.78□□□□□ -0.84
CDHR3-209ENST00000472116 SARGQ9BW04 601 aa9.78□□□□□ -0.84
CDHR3-209ENST00000472116 TP63Q9H3D4 680 aaPredicted RBP9.78□□□□□ -0.84
CDHR3-209ENST00000472116 TFB2MQ9H5Q4 396 aaKnown RBP9.78□□□□□ -0.84
CDHR3-209ENST00000472116 MAGEE1Q9HCI5 957 aa9.78□□□□□ -0.84
CDHR3-209ENST00000472116 CUTCQ9NTM9 273 aa9.78□□□□□ -0.84
CDHR3-209ENST00000472116 MAN1B1Q9UKM7 699 aa9.78□□□□□ -0.84
CDHR3-209ENST00000472116 VPS13CQ709C8 3753 aa9.77□□□□□ -0.85
CDHR3-209ENST00000472116 A0A0J9YY10 115 aa9.77□□□□□ -0.85
CDHR3-209ENST00000472116 ASPDHA6ND91 283 aa9.77□□□□□ -0.85
CDHR3-209ENST00000472116 GOLGA6L4A6NEF3 574 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms