RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 CEP97Q8IW35 865 aa18.24■□□□□ 0.51
SORT1-203ENST00000471996 DNAJB8Q8NHS0 232 aa18.24■□□□□ 0.51
SORT1-203ENST00000471996 DENND1AQ8TEH3 1009 aa18.24■□□□□ 0.51
SORT1-203ENST00000471996 CHTF18Q8WVB6 975 aa18.24■□□□□ 0.51
SORT1-203ENST00000471996 HAS2Q92819 552 aa18.24■□□□□ 0.51
SORT1-203ENST00000471996 SPOCK3Q9BQ16 436 aa18.24■□□□□ 0.51
SORT1-203ENST00000471996 RTN4Q9NQC3 1192 aaKnown RBP18.24■□□□□ 0.51
SORT1-203ENST00000471996 SPHK1Q9NYA1 384 aa18.24■□□□□ 0.51
SORT1-203ENST00000471996 EURLQ9NYK6 297 aa18.24■□□□□ 0.51
SORT1-203ENST00000471996 AGAP14A8MT82 685 aa18.23■□□□□ 0.51
SORT1-203ENST00000471996 CLDN14O95500 239 aa18.23■□□□□ 0.51
SORT1-203ENST00000471996 HPP00738 406 aa18.23■□□□□ 0.51
SORT1-203ENST00000471996 CHRM5P08912 532 aaPredicted RBP18.23■□□□□ 0.51
SORT1-203ENST00000471996 SHMT2P34897 504 aa18.23■□□□□ 0.51
SORT1-203ENST00000471996 SOX11P35716 441 aa18.23■□□□□ 0.51
SORT1-203ENST00000471996 CASP6P55212 293 aa18.23■□□□□ 0.51
SORT1-203ENST00000471996 CDSNQ15517 529 aa18.23■□□□□ 0.51
SORT1-203ENST00000471996 FAM20CQ8IXL6 584 aa18.23■□□□□ 0.51
SORT1-203ENST00000471996 ZNF160Q9HCG1 818 aa18.23■□□□□ 0.51
SORT1-203ENST00000471996 ARL5AQ9Y689 179 aa18.23■□□□□ 0.51
SORT1-203ENST00000471996 LRRD1A4D1F6 860 aa18.22■□□□□ 0.51
SORT1-203ENST00000471996 VSTM2BA6NLU5 285 aa18.22■□□□□ 0.51
SORT1-203ENST00000471996 USP1O94782 785 aa18.22■□□□□ 0.51
SORT1-203ENST00000471996 RASAL1O95294 804 aa18.22■□□□□ 0.51
SORT1-203ENST00000471996 ESRRAP11474 423 aaPredicted RBP18.22■□□□□ 0.51
SORT1-203ENST00000471996 ATP1B2P14415 290 aaPredicted RBP18.22■□□□□ 0.51
SORT1-203ENST00000471996 NFKB1P19838 968 aa18.22■□□□□ 0.51
SORT1-203ENST00000471996 RPA4Q13156 261 aa18.22■□□□□ 0.51
SORT1-203ENST00000471996 ZNF449Q6P9G9 518 aa18.22■□□□□ 0.51
SORT1-203ENST00000471996 KBTBD2Q8IY47 623 aa18.22■□□□□ 0.51
SORT1-203ENST00000471996 OR4K2Q8NGD2 314 aa18.22■□□□□ 0.51
SORT1-203ENST00000471996 CCDC110Q8TBZ0 833 aa18.22■□□□□ 0.51
SORT1-203ENST00000471996 HEXDCQ8WVB3 486 aa18.22■□□□□ 0.51
SORT1-203ENST00000471996 ZDHHC19Q8WVZ1 309 aaPredicted RBP18.22■□□□□ 0.51
SORT1-203ENST00000471996 PSMF1Q92530 271 aa18.22■□□□□ 0.51
SORT1-203ENST00000471996 OXNAD1Q96HP4 312 aaPredicted RBP18.22■□□□□ 0.51
SORT1-203ENST00000471996 MESP1Q9BRJ9 268 aa18.22■□□□□ 0.51
SORT1-203ENST00000471996 MAK16Q9BXY0 300 aaKnown RBP18.22■□□□□ 0.51
SORT1-203ENST00000471996 OR6C2Q9NZP2 312 aa18.22■□□□□ 0.51
SORT1-203ENST00000471996 PTGFRNQ9P2B2 879 aa18.22■□□□□ 0.51
SORT1-203ENST00000471996 CTSFQ9UBX1 484 aa18.22■□□□□ 0.51
SORT1-203ENST00000471996 FKBPLQ9UIM3 349 aa18.22■□□□□ 0.51
SORT1-203ENST00000471996 CRLS1Q9UJA2 301 aa18.22■□□□□ 0.51
SORT1-203ENST00000471996 NAV3Q8IVL0 2385 aa18.22■□□□□ 0.51
SORT1-203ENST00000471996 C3orf70A6NLC5 250 aaPredicted RBP18.21■□□□□ 0.51
SORT1-203ENST00000471996 CFAP99D6REC4 459 aa18.21■□□□□ 0.51
SORT1-203ENST00000471996 DSCR3O14972 297 aa18.21■□□□□ 0.51
SORT1-203ENST00000471996 SLC19A2O60779 497 aa18.21■□□□□ 0.51
SORT1-203ENST00000471996 ZFXP17010 805 aaPredicted RBP18.21■□□□□ 0.51
SORT1-203ENST00000471996 XIAPP98170 497 aa18.21■□□□□ 0.51
SORT1-203ENST00000471996 SRSF11Q05519 484 aaKnown RBP18.21■□□□□ 0.51
SORT1-203ENST00000471996 WASHC5Q12768 1159 aa18.21■□□□□ 0.51
SORT1-203ENST00000471996 C3AR1Q16581 482 aa18.21■□□□□ 0.51
SORT1-203ENST00000471996 VSIG1Q86XK7 387 aa18.21■□□□□ 0.51
SORT1-203ENST00000471996 MCATQ8IVS2 390 aaKnown RBP18.21■□□□□ 0.51
SORT1-203ENST00000471996 IPMKQ8NFU5 416 aa18.21■□□□□ 0.51
SORT1-203ENST00000471996 OR5AR1Q8NGP9 310 aa18.21■□□□□ 0.51
SORT1-203ENST00000471996 ADAMTS18Q8TE60 1221 aa18.21■□□□□ 0.51
SORT1-203ENST00000471996 ULK4Q96C45 1275 aa18.21■□□□□ 0.51
SORT1-203ENST00000471996 FCRL5Q96RD9 977 aa18.21■□□□□ 0.51
SORT1-203ENST00000471996 COPS8Q99627 209 aa18.21■□□□□ 0.51
SORT1-203ENST00000471996 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.21■□□□□ 0.51
SORT1-203ENST00000471996 ANO10Q9NW15 660 aa18.21■□□□□ 0.51
SORT1-203ENST00000471996 NEU2Q9Y3R4 380 aa18.21■□□□□ 0.51
SORT1-203ENST00000471996 BZW2Q9Y6E2 419 aaKnown RBP18.21■□□□□ 0.51
SORT1-203ENST00000471996 ABCA2Q9BZC7 2435 aa18.21■□□□□ 0.51
SORT1-203ENST00000471996 A0A087X0T9 212 aa18.2■□□□□ 0.5
SORT1-203ENST00000471996 C2orf81A6NN90 581 aa18.2■□□□□ 0.5
SORT1-203ENST00000471996 NADKO95544 446 aaPredicted RBP18.2■□□□□ 0.5
SORT1-203ENST00000471996 FAM228BP0C875 321 aa18.2■□□□□ 0.5
SORT1-203ENST00000471996 PRR35P0CG20 571 aa18.2■□□□□ 0.5
SORT1-203ENST00000471996 ACPPP15309 386 aa18.2■□□□□ 0.5
SORT1-203ENST00000471996 FDXRP22570 491 aa18.2■□□□□ 0.5
SORT1-203ENST00000471996 CARSP49589 748 aaKnown RBP18.2■□□□□ 0.5
SORT1-203ENST00000471996 FANCCQ00597 558 aa18.2■□□□□ 0.5
SORT1-203ENST00000471996 TAF1AQ15573 450 aaPredicted RBP18.2■□□□□ 0.5
SORT1-203ENST00000471996 YOD1Q5VVQ6 348 aaPredicted RBP18.2■□□□□ 0.5
SORT1-203ENST00000471996 FAAH2Q6GMR7 532 aa18.2■□□□□ 0.5
SORT1-203ENST00000471996 RBM43Q6ZSC3 357 aaKnown RBP18.2■□□□□ 0.5
SORT1-203ENST00000471996 ACBD4Q8NC06 268 aa18.2■□□□□ 0.5
SORT1-203ENST00000471996 BRIX1Q8TDN6 353 aaKnown RBP18.2■□□□□ 0.5
SORT1-203ENST00000471996 CRB3Q9BUF7 120 aa18.2■□□□□ 0.5
SORT1-203ENST00000471996 ENKD1Q9H0I2 346 aa18.2■□□□□ 0.5
SORT1-203ENST00000471996 VPS37BQ9H9H4 285 aa18.2■□□□□ 0.5
SORT1-203ENST00000471996 CUTCQ9NTM9 273 aa18.2■□□□□ 0.5
SORT1-203ENST00000471996 CTTNBP2NLQ9P2B4 639 aa18.2■□□□□ 0.5
SORT1-203ENST00000471996 TINAGQ9UJW2 476 aa18.2■□□□□ 0.5
SORT1-203ENST00000471996 MRPS2Q9Y399 296 aaKnown RBP18.2■□□□□ 0.5
SORT1-203ENST00000471996 ISM1B1AKI9 464 aa18.19■□□□□ 0.5
SORT1-203ENST00000471996 MAP2K7O14733 419 aa18.19■□□□□ 0.5
SORT1-203ENST00000471996 TPBGLP0DKB5 382 aa18.19■□□□□ 0.5
SORT1-203ENST00000471996 PEBP1P30086 187 aaKnown RBP18.19■□□□□ 0.5
SORT1-203ENST00000471996 OR1D4P47884 311 aa18.19■□□□□ 0.5
SORT1-203ENST00000471996 MPP3Q13368 585 aa18.19■□□□□ 0.5
SORT1-203ENST00000471996 ALKBH5Q6P6C2 394 aaKnown RBP18.19■□□□□ 0.5
SORT1-203ENST00000471996 MMP21Q8N119 569 aa18.19■□□□□ 0.5
SORT1-203ENST00000471996 FAM96AQ9H5X1 160 aa18.19■□□□□ 0.5
SORT1-203ENST00000471996 IL1RAPL1Q9NZN1 696 aa18.19■□□□□ 0.5
SORT1-203ENST00000471996 POLG2Q9UHN1 485 aa18.19■□□□□ 0.5
SORT1-203ENST00000471996 ASF1AQ9Y294 204 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms