RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 C13orf42A0A1B0GVH6 325 aa6.32□□□□□ -1.4
SMC5-202ENST00000471372 RPS10-NUDT3A0A1W2PQS6 291 aa6.32□□□□□ -1.4
SMC5-202ENST00000471372 INAFM1C9JVW0 142 aa6.32□□□□□ -1.4
SMC5-202ENST00000471372 FLRT2O43155 660 aa6.32□□□□□ -1.4
SMC5-202ENST00000471372 FZD7O75084 574 aa6.32□□□□□ -1.4
SMC5-202ENST00000471372 GLCEO94923 617 aa6.32□□□□□ -1.4
SMC5-202ENST00000471372 WDPCPO95876 746 aa6.32□□□□□ -1.4
SMC5-202ENST00000471372 ACP2P11117 423 aa6.32□□□□□ -1.4
SMC5-202ENST00000471372 S1PR1P21453 382 aa6.32□□□□□ -1.4
SMC5-202ENST00000471372 HSD17B3P37058 310 aa6.32□□□□□ -1.4
SMC5-202ENST00000471372 IL15P40933 162 aaPredicted RBP6.32□□□□□ -1.4
SMC5-202ENST00000471372 AMTP48728 403 aa6.32□□□□□ -1.4
SMC5-202ENST00000471372 SERPINH1P50454 418 aaKnown RBP6.32□□□□□ -1.4
SMC5-202ENST00000471372 PLCD1P51178 756 aa6.32□□□□□ -1.4
SMC5-202ENST00000471372 INHBCP55103 352 aa6.32□□□□□ -1.4
SMC5-202ENST00000471372 SRSF1Q07955 248 aaKnown RBP eCLIP6.32□□□□□ -1.4
SMC5-202ENST00000471372 RBMS2Q15434 407 aaKnown RBP6.32□□□□□ -1.4
SMC5-202ENST00000471372 TRIP6Q15654 476 aaKnown RBP6.32□□□□□ -1.4
SMC5-202ENST00000471372 PRTGQ2VWP7 1150 aa6.32□□□□□ -1.4
SMC5-202ENST00000471372 TOR1AIP1Q5JTV8 583 aa6.32□□□□□ -1.4
SMC5-202ENST00000471372 GALNT17Q6IS24 598 aa6.32□□□□□ -1.4
SMC5-202ENST00000471372 KLC3Q6P597 504 aa6.32□□□□□ -1.4
SMC5-202ENST00000471372 BTNL8Q6UX41 500 aa6.32□□□□□ -1.4
SMC5-202ENST00000471372 ISLR2Q6UXK2 745 aa6.32□□□□□ -1.4
SMC5-202ENST00000471372 GLCCI1Q86VQ1 547 aa6.32□□□□□ -1.4
SMC5-202ENST00000471372 TMPRSS12Q86WS5 348 aa6.32□□□□□ -1.4
SMC5-202ENST00000471372 BMPERQ8N8U9 685 aa6.32□□□□□ -1.4
SMC5-202ENST00000471372 URGCPQ8TCY9 931 aa6.32□□□□□ -1.4
SMC5-202ENST00000471372 UBLCP1Q8WVY7 318 aaPredicted RBP6.32□□□□□ -1.4
SMC5-202ENST00000471372 SLC13A3Q8WWT9 602 aa6.32□□□□□ -1.4
SMC5-202ENST00000471372 PRCCQ92733 491 aaPredicted RBP6.32□□□□□ -1.4
SMC5-202ENST00000471372 PROX1Q92786 737 aa6.32□□□□□ -1.4
SMC5-202ENST00000471372 C3orf30Q96M34 536 aa6.32□□□□□ -1.4
SMC5-202ENST00000471372 SLX1AQ9BQ83 275 aa6.32□□□□□ -1.4
SMC5-202ENST00000471372 SERINC1Q9NRX5 453 aa6.32□□□□□ -1.4
SMC5-202ENST00000471372 LRWD1Q9UFC0 647 aa6.32□□□□□ -1.4
SMC5-202ENST00000471372 ING1Q9UK53 422 aaPredicted RBP6.32□□□□□ -1.4
SMC5-202ENST00000471372 FZD10Q9ULW2 581 aa6.32□□□□□ -1.4
SMC5-202ENST00000471372 TDRKHQ9Y2W6 561 aaKnown RBP6.32□□□□□ -1.4
SMC5-202ENST00000471372 PCDH11YQ9BZA8 1340 aa6.31□□□□□ -1.4
SMC5-202ENST00000471372 SLC9B1P1A6NJY1 282 aa6.31□□□□□ -1.4
SMC5-202ENST00000471372 RFPL2O75678 378 aa6.31□□□□□ -1.4
SMC5-202ENST00000471372 GUCA1CO95843 209 aa6.31□□□□□ -1.4
SMC5-202ENST00000471372 IGHDP01880 384 aa6.31□□□□□ -1.4
SMC5-202ENST00000471372 ALPPP05187 535 aa6.31□□□□□ -1.4
SMC5-202ENST00000471372 ALPPL2P10696 532 aa6.31□□□□□ -1.4
SMC5-202ENST00000471372 HAPLN1P10915 354 aaPredicted RBP6.31□□□□□ -1.4
SMC5-202ENST00000471372 PRF1P14222 555 aa6.31□□□□□ -1.4
SMC5-202ENST00000471372 MYOD1P15172 320 aa6.31□□□□□ -1.4
SMC5-202ENST00000471372 IL10P22301 178 aa6.31□□□□□ -1.4
SMC5-202ENST00000471372 MAGEB1P43366 347 aa6.31□□□□□ -1.4
SMC5-202ENST00000471372 BRWD1-AS2P59051 145 aa6.31□□□□□ -1.4
SMC5-202ENST00000471372 ISL1P61371 349 aa6.31□□□□□ -1.4
SMC5-202ENST00000471372 ABATP80404 500 aa6.31□□□□□ -1.4
SMC5-202ENST00000471372 FHL2Q14192 279 aa6.31□□□□□ -1.4
SMC5-202ENST00000471372 PTGISQ16647 500 aa6.31□□□□□ -1.4
SMC5-202ENST00000471372 MCMDC2Q4G0Z9 681 aa6.31□□□□□ -1.4
SMC5-202ENST00000471372 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.31□□□□□ -1.4
SMC5-202ENST00000471372 SPOUT1Q5T280 376 aaKnown RBP6.31□□□□□ -1.4
SMC5-202ENST00000471372 ZCCHC12Q6PEW1 402 aa6.31□□□□□ -1.4
SMC5-202ENST00000471372 RD3Q7Z3Z2 195 aa6.31□□□□□ -1.4
SMC5-202ENST00000471372 THAP8Q8NA92 274 aa6.31□□□□□ -1.4
SMC5-202ENST00000471372 ANKRD20A12PQ8NF67 263 aa6.31□□□□□ -1.4
SMC5-202ENST00000471372 C16orf52Q8NHV5 167 aa6.31□□□□□ -1.4
SMC5-202ENST00000471372 MAGEC3Q8TD91 643 aa6.31□□□□□ -1.4
SMC5-202ENST00000471372 DHX58Q96C10 678 aa6.31□□□□□ -1.4
SMC5-202ENST00000471372 CHFRQ96EP1 664 aa6.31□□□□□ -1.4
SMC5-202ENST00000471372 SLC25A33Q9BSK2 321 aa6.31□□□□□ -1.4
SMC5-202ENST00000471372 KRTAP17-1Q9BYP8 105 aa6.31□□□□□ -1.4
SMC5-202ENST00000471372 HSD3B7Q9H2F3 369 aa6.31□□□□□ -1.4
SMC5-202ENST00000471372 RIOX1Q9H6W3 641 aa6.31□□□□□ -1.4
SMC5-202ENST00000471372 LIN28AQ9H9Z2 209 aaKnown RBP6.31□□□□□ -1.4
SMC5-202ENST00000471372 ACKR4Q9NPB9 350 aa6.31□□□□□ -1.4
SMC5-202ENST00000471372 ACTR3BQ9P1U1 418 aa6.31□□□□□ -1.4
SMC5-202ENST00000471372 TXNDC16Q9P2K2 825 aa6.31□□□□□ -1.4
SMC5-202ENST00000471372 WDR83OSQ9Y284 106 aa6.31□□□□□ -1.4
SMC5-202ENST00000471372 TMED3Q9Y3Q3 217 aa6.31□□□□□ -1.4
SMC5-202ENST00000471372 ATP6V0A2Q9Y487 856 aa6.31□□□□□ -1.4
SMC5-202ENST00000471372 TRIM17Q9Y577 477 aa6.31□□□□□ -1.4
SMC5-202ENST00000471372 PDS5AQ29RF7 1337 aaKnown RBP6.3□□□□□ -1.4
SMC5-202ENST00000471372 TEX13DA0A0J9YY54 714 aaPredicted RBP6.3□□□□□ -1.4
SMC5-202ENST00000471372 H0YIG0 161 aa6.3□□□□□ -1.4
SMC5-202ENST00000471372 RBMXL2O75526 392 aaKnown RBP6.3□□□□□ -1.4
SMC5-202ENST00000471372 ATP6AP2O75787 350 aa6.3□□□□□ -1.4
SMC5-202ENST00000471372 LETM1O95202 739 aaPredicted RBP6.3□□□□□ -1.4
SMC5-202ENST00000471372 SYF2O95926 243 aaKnown RBP6.3□□□□□ -1.4
SMC5-202ENST00000471372 KRT19P08727 400 aa6.3□□□□□ -1.4
SMC5-202ENST00000471372 ABHD2P08910 425 aa6.3□□□□□ -1.4
SMC5-202ENST00000471372 CCNA2P20248 432 aa6.3□□□□□ -1.4
SMC5-202ENST00000471372 TGFB2P61812 414 aa6.3□□□□□ -1.4
SMC5-202ENST00000471372 PTPN14Q15678 1187 aa6.3□□□□□ -1.4
SMC5-202ENST00000471372 NPTX1Q15818 432 aa6.3□□□□□ -1.4
SMC5-202ENST00000471372 SUSD4Q5VX71 490 aa6.3□□□□□ -1.4
SMC5-202ENST00000471372 CCNI2Q6ZMN8 369 aaPredicted RBP6.3□□□□□ -1.4
SMC5-202ENST00000471372 TOM1L2Q6ZVM7 507 aa6.3□□□□□ -1.4
SMC5-202ENST00000471372 PRSS42Q7Z5A4 293 aa6.3□□□□□ -1.4
SMC5-202ENST00000471372 CFAP206Q8IYR0 622 aa6.3□□□□□ -1.4
SMC5-202ENST00000471372 C1orf87Q8N0U7 546 aa6.3□□□□□ -1.4
SMC5-202ENST00000471372 PGBD5Q8N414 524 aa6.3□□□□□ -1.4
SMC5-202ENST00000471372 MRPL43Q8N983 215 aaKnown RBP6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms