RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 CD6P30203 668 aa6.5□□□□□ -1.37
VAMP3-202ENST00000470357 ALDH3A1P30838 453 aa6.5□□□□□ -1.37
VAMP3-202ENST00000470357 HOXA6P31267 233 aa6.5□□□□□ -1.37
VAMP3-202ENST00000470357 LSP1P33241 339 aa6.5□□□□□ -1.37
VAMP3-202ENST00000470357 CNR2P34972 360 aa6.5□□□□□ -1.37
VAMP3-202ENST00000470357 CLCN7P51798 805 aa6.5□□□□□ -1.37
VAMP3-202ENST00000470357 YPEL5P62699 121 aa6.5□□□□□ -1.37
VAMP3-202ENST00000470357 CDK3Q00526 305 aa6.5□□□□□ -1.37
VAMP3-202ENST00000470357 GUCY1A3Q02108 690 aa6.5□□□□□ -1.37
VAMP3-202ENST00000470357 GABPB1Q06547 395 aaPredicted RBP6.5□□□□□ -1.37
VAMP3-202ENST00000470357 RPA4Q13156 261 aa6.5□□□□□ -1.37
VAMP3-202ENST00000470357 MPP2Q14168 576 aa6.5□□□□□ -1.37
VAMP3-202ENST00000470357 IRF4Q15306 451 aa6.5□□□□□ -1.37
VAMP3-202ENST00000470357 SF3A2Q15428 464 aaKnown RBP6.5□□□□□ -1.37
VAMP3-202ENST00000470357 SYTL3Q4VX76 610 aa6.5□□□□□ -1.37
VAMP3-202ENST00000470357 CDKL4Q5MAI5 379 aa6.5□□□□□ -1.37
VAMP3-202ENST00000470357 SEL1L3Q68CR1 1132 aa6.5□□□□□ -1.37
VAMP3-202ENST00000470357 KIAA0895LQ68EN5 471 aa6.5□□□□□ -1.37
VAMP3-202ENST00000470357 PAQR3Q6TCH7 311 aa6.5□□□□□ -1.37
VAMP3-202ENST00000470357 UNQ6494/PRO21346Q6UXR6 183 aa6.5□□□□□ -1.37
VAMP3-202ENST00000470357 ZYG11AQ6WRX3 759 aa6.5□□□□□ -1.37
VAMP3-202ENST00000470357 FAM124AQ86V42 546 aa6.5□□□□□ -1.37
VAMP3-202ENST00000470357 C11orf74Q86VG3 221 aa6.5□□□□□ -1.37
VAMP3-202ENST00000470357 LONP2Q86WA8 852 aa6.5□□□□□ -1.37
VAMP3-202ENST00000470357 HEATR4Q86WZ0 1026 aa6.5□□□□□ -1.37
VAMP3-202ENST00000470357 NUDCD3Q8IVD9 361 aa6.5□□□□□ -1.37
VAMP3-202ENST00000470357 CENPLQ8N0S6 344 aaPredicted RBP6.5□□□□□ -1.37
VAMP3-202ENST00000470357 MYO1HQ8N1T3 1032 aa6.5□□□□□ -1.37
VAMP3-202ENST00000470357 CLDN19Q8N6F1 224 aa6.5□□□□□ -1.37
VAMP3-202ENST00000470357 TP53I13Q8NBR0 393 aaPredicted RBP6.5□□□□□ -1.37
VAMP3-202ENST00000470357 ACVR1CQ8NER5 493 aa6.5□□□□□ -1.37
VAMP3-202ENST00000470357 PPP1R14CQ8TAE6 165 aa6.5□□□□□ -1.37
VAMP3-202ENST00000470357 MDM1Q8TC05 714 aa6.5□□□□□ -1.37
VAMP3-202ENST00000470357 CD200R1Q8TD46 325 aa6.5□□□□□ -1.37
VAMP3-202ENST00000470357 KCTD4Q8WVF5 259 aa6.5□□□□□ -1.37
VAMP3-202ENST00000470357 KIAA1191Q96A73 305 aa6.5□□□□□ -1.37
VAMP3-202ENST00000470357 TMEM159Q96B96 161 aa6.5□□□□□ -1.37
VAMP3-202ENST00000470357 NXNL1Q96CM4 212 aa6.5□□□□□ -1.37
VAMP3-202ENST00000470357 ERLEC1Q96DZ1 483 aa6.5□□□□□ -1.37
VAMP3-202ENST00000470357 COX14Q96I36 57 aa6.5□□□□□ -1.37
VAMP3-202ENST00000470357 LINC00615Q96LM1 132 aaPredicted RBP6.5□□□□□ -1.37
VAMP3-202ENST00000470357 CCM2Q9BSQ5 444 aa6.5□□□□□ -1.37
VAMP3-202ENST00000470357 BOCQ9BWV1 1114 aa6.5□□□□□ -1.37
VAMP3-202ENST00000470357 TRIM54Q9BYV2 358 aa6.5□□□□□ -1.37
VAMP3-202ENST00000470357 SLC6A17Q9H1V8 727 aa6.5□□□□□ -1.37
VAMP3-202ENST00000470357 SARS2Q9NP81 518 aaKnown RBP6.5□□□□□ -1.37
VAMP3-202ENST00000470357 ZFP64Q9NPA5 681 aa6.5□□□□□ -1.37
VAMP3-202ENST00000470357 TMEM216Q9P0N5 145 aa6.5□□□□□ -1.37
VAMP3-202ENST00000470357 SLC17A7Q9P2U7 560 aa6.5□□□□□ -1.37
VAMP3-202ENST00000470357 COPG2Q9UBF2 871 aa6.5□□□□□ -1.37
VAMP3-202ENST00000470357 TMPRSS11EQ9UL52 423 aa6.5□□□□□ -1.37
VAMP3-202ENST00000470357 CNOT6Q9ULM6 557 aaKnown RBP6.5□□□□□ -1.37
VAMP3-202ENST00000470357 ZFR2Q9UPR6 939 aaKnown RBP6.5□□□□□ -1.37
VAMP3-202ENST00000470357 HS3ST3A1Q9Y663 406 aa6.5□□□□□ -1.37
VAMP3-202ENST00000470357 HELZ2Q9BYK8 2649 aaKnown RBP6.5□□□□□ -1.37
VAMP3-202ENST00000470357 ASH1LQ9NR48 2969 aaKnown RBP6.5□□□□□ -1.37
VAMP3-202ENST00000470357 EML5Q05BV3 1969 aa6.49□□□□□ -1.37
VAMP3-202ENST00000470357 SPAG17Q6Q759 2223 aa6.49□□□□□ -1.37
VAMP3-202ENST00000470357 GMNCA6NCL1 334 aa6.49□□□□□ -1.37
VAMP3-202ENST00000470357 TNFRSF10CO14798 259 aa6.49□□□□□ -1.37
VAMP3-202ENST00000470357 CHUKO15111 745 aa6.49□□□□□ -1.37
VAMP3-202ENST00000470357 KMOO15229 486 aa6.49□□□□□ -1.37
VAMP3-202ENST00000470357 RAD51BO15315 384 aa6.49□□□□□ -1.37
VAMP3-202ENST00000470357 SLC16A5O15375 505 aa6.49□□□□□ -1.37
VAMP3-202ENST00000470357 GPR39O43194 453 aa6.49□□□□□ -1.37
VAMP3-202ENST00000470357 NUAK1O60285 661 aa6.49□□□□□ -1.37
VAMP3-202ENST00000470357 TRIM13O60858 407 aa6.49□□□□□ -1.37
VAMP3-202ENST00000470357 DNAJC6O75061 913 aa6.49□□□□□ -1.37
VAMP3-202ENST00000470357 TOP3BO95985 862 aaKnown RBP6.49□□□□□ -1.37
VAMP3-202ENST00000470357 SOD1P00441 154 aa6.49□□□□□ -1.37
VAMP3-202ENST00000470357 S100BP04271 92 aaPredicted RBP6.49□□□□□ -1.37
VAMP3-202ENST00000470357 C8GP07360 202 aa6.49□□□□□ -1.37
VAMP3-202ENST00000470357 BPGMP07738 259 aa6.49□□□□□ -1.37
VAMP3-202ENST00000470357 MPC1LP0DKB6 136 aa6.49□□□□□ -1.37
VAMP3-202ENST00000470357 CD1DP15813 335 aa6.49□□□□□ -1.37
VAMP3-202ENST00000470357 TFEBP19484 476 aa6.49□□□□□ -1.37
VAMP3-202ENST00000470357 ATP5F1P24539 256 aaPredicted RBP6.49□□□□□ -1.37
VAMP3-202ENST00000470357 AOAHP28039 575 aa6.49□□□□□ -1.37
VAMP3-202ENST00000470357 ACSL1P33121 698 aa6.49□□□□□ -1.37
VAMP3-202ENST00000470357 SERPINB5P36952 375 aa6.49□□□□□ -1.37
VAMP3-202ENST00000470357 RABIFP47224 123 aa6.49□□□□□ -1.37
VAMP3-202ENST00000470357 GYS2P54840 703 aa6.49□□□□□ -1.37
VAMP3-202ENST00000470357 KIAA1024LP59773 190 aa6.49□□□□□ -1.37
VAMP3-202ENST00000470357 CBX1P83916 185 aa6.49□□□□□ -1.37
VAMP3-202ENST00000470357 NFKB2Q00653 900 aa6.49□□□□□ -1.37
VAMP3-202ENST00000470357 B4GALNT1Q00973 533 aa6.49□□□□□ -1.37
VAMP3-202ENST00000470357 IRF9Q00978 393 aa6.49□□□□□ -1.37
VAMP3-202ENST00000470357 TIAL1Q01085 375 aaKnown RBP eCLIP6.49□□□□□ -1.37
VAMP3-202ENST00000470357 OVGP1Q12889 678 aa6.49□□□□□ -1.37
VAMP3-202ENST00000470357 SP140Q13342 867 aa6.49□□□□□ -1.37
VAMP3-202ENST00000470357 LRP8Q14114 963 aa6.49□□□□□ -1.37
VAMP3-202ENST00000470357 ZNF460Q14592 562 aa6.49□□□□□ -1.37
VAMP3-202ENST00000470357 INPP5AQ14642 412 aa6.49□□□□□ -1.37
VAMP3-202ENST00000470357 CCDC6Q16204 474 aa6.49□□□□□ -1.37
VAMP3-202ENST00000470357 USP39Q53GS9 565 aaKnown RBP6.49□□□□□ -1.37
VAMP3-202ENST00000470357 TECRLQ5HYJ1 363 aa6.49□□□□□ -1.37
VAMP3-202ENST00000470357 STPG1Q5TH74 334 aa6.49□□□□□ -1.37
VAMP3-202ENST00000470357 LIPMQ5VYY2 423 aa6.49□□□□□ -1.37
VAMP3-202ENST00000470357 METTL2BQ6P1Q9 378 aaKnown RBP6.49□□□□□ -1.37
VAMP3-202ENST00000470357 TTC23LQ6PF05 361 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms