RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 FERP16591 822 aa11.49□□□□□ -0.57
LSM2-209ENST00000470083 CARSP49589 748 aaKnown RBP11.49□□□□□ -0.57
LSM2-209ENST00000470083 GBE1Q04446 702 aa11.49□□□□□ -0.57
LSM2-209ENST00000470083 PCOLCEQ15113 449 aa11.49□□□□□ -0.57
LSM2-209ENST00000470083 DPCR1Q3MIW9 517 aa11.49□□□□□ -0.57
LSM2-209ENST00000470083 CCDC70Q6NSX1 233 aa11.49□□□□□ -0.57
LSM2-209ENST00000470083 SIRT6Q8N6T7 355 aa11.49□□□□□ -0.57
LSM2-209ENST00000470083 NEK11Q8NG66 645 aa11.49□□□□□ -0.57
LSM2-209ENST00000470083 SPATA3Q8NHX4 192 aa11.49□□□□□ -0.57
LSM2-209ENST00000470083 AGAP11Q8TF27 550 aa11.49□□□□□ -0.57
LSM2-209ENST00000470083 NAT14Q8WUY8 206 aa11.49□□□□□ -0.57
LSM2-209ENST00000470083 OR2A14Q96R47 310 aa11.49□□□□□ -0.57
LSM2-209ENST00000470083 DMRTA2Q96SC8 542 aa11.49□□□□□ -0.57
LSM2-209ENST00000470083 VKORC1Q9BQB6 163 aa11.49□□□□□ -0.57
LSM2-209ENST00000470083 ZNF559Q9BR84 538 aa11.49□□□□□ -0.57
LSM2-209ENST00000470083 HGH1Q9BTY7 390 aa11.49□□□□□ -0.57
LSM2-209ENST00000470083 MRPL47Q9HD33 250 aaKnown RBP11.49□□□□□ -0.57
LSM2-209ENST00000470083 EURLQ9NYK6 297 aa11.49□□□□□ -0.57
LSM2-209ENST00000470083 IL17CQ9P0M4 197 aa11.49□□□□□ -0.57
LSM2-209ENST00000470083 KCNN3Q9UGI6 736 aa11.49□□□□□ -0.57
LSM2-209ENST00000470083 FN1P02751 2386 aaKnown RBP11.49□□□□□ -0.57
LSM2-209ENST00000470083 NSG1A0A0A6YYJ2 146 aa11.48□□□□□ -0.57
LSM2-209ENST00000470083 A0A0J9YY10 115 aa11.48□□□□□ -0.57
LSM2-209ENST00000470083 OR5H15A6NDH6 313 aa11.48□□□□□ -0.57
LSM2-209ENST00000470083 IFRD1O00458 451 aaPredicted RBP11.48□□□□□ -0.57
LSM2-209ENST00000470083 DSCR3O14972 297 aa11.48□□□□□ -0.57
LSM2-209ENST00000470083 SGTAO43765 313 aa11.48□□□□□ -0.57
LSM2-209ENST00000470083 MLYCDO95822 493 aa11.48□□□□□ -0.57
LSM2-209ENST00000470083 FTLP02792 175 aaPredicted RBP11.48□□□□□ -0.57
LSM2-209ENST00000470083 TPM2P07951 284 aa11.48□□□□□ -0.57
LSM2-209ENST00000470083 NSG1P42857 185 aa11.48□□□□□ -0.57
LSM2-209ENST00000470083 ARSEP51690 589 aa11.48□□□□□ -0.57
LSM2-209ENST00000470083 SLC10A2Q12908 348 aaPredicted RBP11.48□□□□□ -0.57
LSM2-209ENST00000470083 DPYSL3Q14195 570 aa11.48□□□□□ -0.57
LSM2-209ENST00000470083 PIGHQ14442 188 aaPredicted RBP11.48□□□□□ -0.57
LSM2-209ENST00000470083 KRT31Q15323 416 aa11.48□□□□□ -0.57
LSM2-209ENST00000470083 SKOR2Q2VWA4 1001 aaPredicted RBP11.48□□□□□ -0.57
LSM2-209ENST00000470083 ATP13A4Q4VNC1 1196 aa11.48□□□□□ -0.57
LSM2-209ENST00000470083 ATG9BQ674R7 924 aa11.48□□□□□ -0.57
LSM2-209ENST00000470083 HIBCHQ6NVY1 386 aaPredicted RBP11.48□□□□□ -0.57
LSM2-209ENST00000470083 NDUFAF7Q7L592 441 aa11.48□□□□□ -0.57
LSM2-209ENST00000470083 NLRP9Q7RTR0 991 aa11.48□□□□□ -0.57
LSM2-209ENST00000470083 NIPA2Q8N8Q9 360 aa11.48□□□□□ -0.57
LSM2-209ENST00000470083 DNAAF3Q8N9W5 541 aa11.48□□□□□ -0.57
LSM2-209ENST00000470083 FLVCR1-AS1Q8TAF5 88 aa11.48□□□□□ -0.57
LSM2-209ENST00000470083 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.48□□□□□ -0.57
LSM2-209ENST00000470083 C8orf44Q96CB5 159 aa11.48□□□□□ -0.57
LSM2-209ENST00000470083 ZNF670Q9BS34 389 aa11.48□□□□□ -0.57
LSM2-209ENST00000470083 SLC25A51Q9H1U9 297 aa11.48□□□□□ -0.57
LSM2-209ENST00000470083 OR52A5Q9H2C5 316 aa11.48□□□□□ -0.57
LSM2-209ENST00000470083 NPDC1Q9NQX5 325 aaPredicted RBP11.48□□□□□ -0.57
LSM2-209ENST00000470083 COQ3Q9NZJ6 369 aa11.48□□□□□ -0.57
LSM2-209ENST00000470083 ICKQ9UPZ9 632 aa11.48□□□□□ -0.57
LSM2-209ENST00000470083 NBEAL1Q6ZS30 2694 aa11.47□□□□□ -0.57
LSM2-209ENST00000470083 A0A1W2PQ72 361 aa11.47□□□□□ -0.57
LSM2-209ENST00000470083 ADAM10O14672 748 aa11.47□□□□□ -0.57
LSM2-209ENST00000470083 GADD45BO75293 160 aaPredicted RBP11.47□□□□□ -0.57
LSM2-209ENST00000470083 SLCO2B1O94956 709 aa11.47□□□□□ -0.57
LSM2-209ENST00000470083 UQCRHP07919 91 aa11.47□□□□□ -0.57
LSM2-209ENST00000470083 CHRM5P08912 532 aaPredicted RBP11.47□□□□□ -0.57
LSM2-209ENST00000470083 COX6A1P12074 109 aa11.47□□□□□ -0.57
LSM2-209ENST00000470083 GZMAP12544 262 aa11.47□□□□□ -0.57
LSM2-209ENST00000470083 SHMT2P34897 504 aa11.47□□□□□ -0.57
LSM2-209ENST00000470083 CD151P48509 253 aa11.47□□□□□ -0.57
LSM2-209ENST00000470083 PRLHRP49683 370 aa11.47□□□□□ -0.57
LSM2-209ENST00000470083 RAB28P51157 221 aa11.47□□□□□ -0.57
LSM2-209ENST00000470083 FANCCQ00597 558 aa11.47□□□□□ -0.57
LSM2-209ENST00000470083 KLC1Q07866 573 aa11.47□□□□□ -0.57
LSM2-209ENST00000470083 PPIDQ08752 370 aaKnown RBP11.47□□□□□ -0.57
LSM2-209ENST00000470083 PRKG2Q13237 762 aa11.47□□□□□ -0.57
LSM2-209ENST00000470083 BOP1Q14137 746 aaKnown RBP11.47□□□□□ -0.57
LSM2-209ENST00000470083 CEBPEQ15744 281 aa11.47□□□□□ -0.57
LSM2-209ENST00000470083 YOD1Q5VVQ6 348 aaPredicted RBP11.47□□□□□ -0.57
LSM2-209ENST00000470083 CES4AQ5XG92 561 aa11.47□□□□□ -0.57
LSM2-209ENST00000470083 CNSTQ6PJW8 725 aa11.47□□□□□ -0.57
LSM2-209ENST00000470083 UNC5AQ6ZN44 842 aa11.47□□□□□ -0.57
LSM2-209ENST00000470083 RIPOR1Q6ZS17 1223 aa11.47□□□□□ -0.57
LSM2-209ENST00000470083 IRF2BP2Q7Z5L9 587 aa11.47□□□□□ -0.57
LSM2-209ENST00000470083 PRIMA1Q86XR5 153 aa11.47□□□□□ -0.57
LSM2-209ENST00000470083 DMRTC2Q8IXT2 367 aaPredicted RBP11.47□□□□□ -0.57
LSM2-209ENST00000470083 EID3Q8N140 333 aa11.47□□□□□ -0.57
LSM2-209ENST00000470083 PHC3Q8NDX5 983 aa11.47□□□□□ -0.57
LSM2-209ENST00000470083 CEP41Q9BYV8 373 aa11.47□□□□□ -0.57
LSM2-209ENST00000470083 CUTCQ9NTM9 273 aa11.47□□□□□ -0.57
LSM2-209ENST00000470083 SPHK1Q9NYA1 384 aa11.47□□□□□ -0.57
LSM2-209ENST00000470083 IL1RAPL1Q9NZN1 696 aa11.47□□□□□ -0.57
LSM2-209ENST00000470083 PPT2Q9UMR5 302 aa11.47□□□□□ -0.57
LSM2-209ENST00000470083 ATRQ13535 2644 aa11.46□□□□□ -0.57
LSM2-209ENST00000470083 KIAA1324LA8MWY0 1029 aaPredicted RBP11.46□□□□□ -0.57
LSM2-209ENST00000470083 FAM227AF5H4B4 570 aa11.46□□□□□ -0.57
LSM2-209ENST00000470083 WFS1O76024 890 aa11.46□□□□□ -0.57
LSM2-209ENST00000470083 MYBL1P10243 752 aa11.46□□□□□ -0.57
LSM2-209ENST00000470083 ABOP16442 354 aa11.46□□□□□ -0.57
LSM2-209ENST00000470083 TFF3Q07654 80 aa11.46□□□□□ -0.57
LSM2-209ENST00000470083 DSG2Q14126 1118 aa11.46□□□□□ -0.57
LSM2-209ENST00000470083 TFDP3Q5H9I0 405 aa11.46□□□□□ -0.57
LSM2-209ENST00000470083 ZNF766Q5HY98 468 aa11.46□□□□□ -0.57
LSM2-209ENST00000470083 FAM182AQ5T1J6 154 aa11.46□□□□□ -0.57
LSM2-209ENST00000470083 DOLPP1Q86YN1 238 aa11.46□□□□□ -0.57
LSM2-209ENST00000470083 MCATQ8IVS2 390 aaKnown RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms