RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 COASYQ13057 564 aa4.76□□□□□ -1.65
LSM5-209ENST00000468872 SYT14P1Q58G82 188 aa4.76□□□□□ -1.65
LSM5-209ENST00000468872 C6orf136Q5SQH8 315 aa4.76□□□□□ -1.65
LSM5-209ENST00000468872 ABI3BPQ7Z7G0 1075 aa4.76□□□□□ -1.65
LSM5-209ENST00000468872 TLK2Q86UE8 772 aa4.76□□□□□ -1.65
LSM5-209ENST00000468872 GPALPP1Q8IXQ4 340 aa4.76□□□□□ -1.65
LSM5-209ENST00000468872 OR13J1Q8NGT2 312 aa4.76□□□□□ -1.65
LSM5-209ENST00000468872 SSMEM1Q8WWF3 244 aa4.76□□□□□ -1.65
LSM5-209ENST00000468872 NR4A3Q92570 626 aa4.76□□□□□ -1.65
LSM5-209ENST00000468872 ATP6V1E2Q96A05 226 aa4.76□□□□□ -1.65
LSM5-209ENST00000468872 MOB3AQ96BX8 217 aa4.76□□□□□ -1.65
LSM5-209ENST00000468872 EGFL8Q99944 293 aa4.76□□□□□ -1.65
LSM5-209ENST00000468872 KATNB1Q9BVA0 655 aa4.76□□□□□ -1.65
LSM5-209ENST00000468872 EVA1AQ9H8M9 152 aa4.76□□□□□ -1.65
LSM5-209ENST00000468872 PELI2Q9HAT8 420 aa4.76□□□□□ -1.65
LSM5-209ENST00000468872 SERINC1Q9NRX5 453 aa4.76□□□□□ -1.65
LSM5-209ENST00000468872 SLC38A7Q9NVC3 462 aa4.76□□□□□ -1.65
LSM5-209ENST00000468872 PTTG2Q9NZH5 202 aa4.76□□□□□ -1.65
LSM5-209ENST00000468872 DNAJB9Q9UBS3 223 aa4.76□□□□□ -1.65
LSM5-209ENST00000468872 POLLQ9UGP5 575 aa4.76□□□□□ -1.65
LSM5-209ENST00000468872 MTUS1Q9ULD2 1270 aa4.76□□□□□ -1.65
LSM5-209ENST00000468872 A0A1W2PPI3 338 aa4.75□□□□□ -1.65
LSM5-209ENST00000468872 A0A1W2PS18 150 aa4.75□□□□□ -1.65
LSM5-209ENST00000468872 FAM170AA1A519 330 aa4.75□□□□□ -1.65
LSM5-209ENST00000468872 DENND3A2RUS2 1198 aa4.75□□□□□ -1.65
LSM5-209ENST00000468872 WDR46O15213 610 aaKnown RBP4.75□□□□□ -1.65
LSM5-209ENST00000468872 SLC7A4O43246 635 aa4.75□□□□□ -1.65
LSM5-209ENST00000468872 AP5Z1O43299 807 aa4.75□□□□□ -1.65
LSM5-209ENST00000468872 SNRNP70P08621 437 aaKnown RBP4.75□□□□□ -1.65
LSM5-209ENST00000468872 SMIM18P0DKX4 95 aa4.75□□□□□ -1.65
LSM5-209ENST00000468872 TCF4P15884 667 aa4.75□□□□□ -1.65
LSM5-209ENST00000468872 TNNT3P45378 269 aaPredicted RBP4.75□□□□□ -1.65
LSM5-209ENST00000468872 CRKLP46109 303 aaKnown RBP4.75□□□□□ -1.65
LSM5-209ENST00000468872 BMXP51813 675 aa4.75□□□□□ -1.65
LSM5-209ENST00000468872 PITX1P78337 314 aaPredicted RBP4.75□□□□□ -1.65
LSM5-209ENST00000468872 CX3CL1P78423 397 aa4.75□□□□□ -1.65
LSM5-209ENST00000468872 DMPKQ09013 629 aa4.75□□□□□ -1.65
LSM5-209ENST00000468872 ILF3Q12906 894 aaKnown RBP eCLIP4.75□□□□□ -1.65
LSM5-209ENST00000468872 TUBB2AQ13885 445 aa4.75□□□□□ -1.65
LSM5-209ENST00000468872 KIR2DS3Q14952 304 aa4.75□□□□□ -1.65
LSM5-209ENST00000468872 GFI1BQ5VTD9 330 aa4.75□□□□□ -1.65
LSM5-209ENST00000468872 ZNF852Q6ZMS4 543 aa4.75□□□□□ -1.65
LSM5-209ENST00000468872 NUP54Q7Z3B4 507 aa4.75□□□□□ -1.65
LSM5-209ENST00000468872 SPATA19Q7Z5L4 167 aa4.75□□□□□ -1.65
LSM5-209ENST00000468872 NAGSQ8N159 534 aa4.75□□□□□ -1.65
LSM5-209ENST00000468872 ANKRD13CQ8N6S4 541 aa4.75□□□□□ -1.65
LSM5-209ENST00000468872 KBTBD3Q8NAB2 608 aa4.75□□□□□ -1.65
LSM5-209ENST00000468872 PPFIBP2Q8ND30 876 aa4.75□□□□□ -1.65
LSM5-209ENST00000468872 MR1Q95460 341 aa4.75□□□□□ -1.65
LSM5-209ENST00000468872 DHX58Q96C10 678 aa4.75□□□□□ -1.65
LSM5-209ENST00000468872 SGK494Q96LW2 274 aa4.75□□□□□ -1.65
LSM5-209ENST00000468872 INTS14Q96SY0 518 aa4.75□□□□□ -1.65
LSM5-209ENST00000468872 FERMT1Q9BQL6 677 aa4.75□□□□□ -1.65
LSM5-209ENST00000468872 LRRC1Q9BTT6 524 aa4.75□□□□□ -1.65
LSM5-209ENST00000468872 TUBB2BQ9BVA1 445 aa4.75□□□□□ -1.65
LSM5-209ENST00000468872 APOBEC3GQ9HC16 384 aaKnown RBP4.75□□□□□ -1.65
LSM5-209ENST00000468872 ABCF3Q9NUQ8 709 aa4.75□□□□□ -1.65
LSM5-209ENST00000468872 TBC1D7Q9P0N9 293 aa4.75□□□□□ -1.65
LSM5-209ENST00000468872 PCDH11YQ9BZA8 1340 aa4.74□□□□□ -1.65
LSM5-209ENST00000468872 ENO4A6NNW6 628 aa4.74□□□□□ -1.65
LSM5-209ENST00000468872 E9PI62 339 aa4.74□□□□□ -1.65
LSM5-209ENST00000468872 GAPDHSO14556 408 aaPredicted RBP4.74□□□□□ -1.65
LSM5-209ENST00000468872 SIX3O95343 332 aaPredicted RBP4.74□□□□□ -1.65
LSM5-209ENST00000468872 GBAP04062 536 aa4.74□□□□□ -1.65
LSM5-209ENST00000468872 CSN3P07498 182 aa4.74□□□□□ -1.65
LSM5-209ENST00000468872 ADRA2CP18825 462 aa4.74□□□□□ -1.65
LSM5-209ENST00000468872 NR1D1P20393 614 aa4.74□□□□□ -1.65
LSM5-209ENST00000468872 TCEA1P23193 301 aaKnown RBP4.74□□□□□ -1.65
LSM5-209ENST00000468872 SLC6A6P31641 620 aa4.74□□□□□ -1.65
LSM5-209ENST00000468872 CTNNA1P35221 906 aaKnown RBP4.74□□□□□ -1.65
LSM5-209ENST00000468872 PTGER4P35408 488 aa4.74□□□□□ -1.65
LSM5-209ENST00000468872 FMO5P49326 533 aa4.74□□□□□ -1.65
LSM5-209ENST00000468872 UBASH3AP57075 661 aa4.74□□□□□ -1.65
LSM5-209ENST00000468872 RPS18P62269 152 aaKnown RBP4.74□□□□□ -1.65
LSM5-209ENST00000468872 GAGE5Q13069 117 aa4.74□□□□□ -1.65
LSM5-209ENST00000468872 GAGE6Q13070 117 aa4.74□□□□□ -1.65
LSM5-209ENST00000468872 ASPRV1Q53RT3 343 aa4.74□□□□□ -1.65
LSM5-209ENST00000468872 TCTE1Q5JU00 501 aa4.74□□□□□ -1.65
LSM5-209ENST00000468872 MFSD6Q6ZSS7 791 aa4.74□□□□□ -1.65
LSM5-209ENST00000468872 ARHGAP22Q7Z5H3 698 aa4.74□□□□□ -1.65
LSM5-209ENST00000468872 ZNF329Q86UD4 541 aa4.74□□□□□ -1.65
LSM5-209ENST00000468872 FAM219AQ8IW50 185 aa4.74□□□□□ -1.65
LSM5-209ENST00000468872 CFAP206Q8IYR0 622 aa4.74□□□□□ -1.65
LSM5-209ENST00000468872 NPEPL1Q8NDH3 523 aa4.74□□□□□ -1.65
LSM5-209ENST00000468872 OCC1Q8TAD7 63 aa4.74□□□□□ -1.65
LSM5-209ENST00000468872 KCNE4Q8WWG9 221 aa4.74□□□□□ -1.65
LSM5-209ENST00000468872 CORO2AQ92828 525 aa4.74□□□□□ -1.65
LSM5-209ENST00000468872 FNBP1Q96RU3 617 aa4.74□□□□□ -1.65
LSM5-209ENST00000468872 DESI2Q9BSY9 194 aa4.74□□□□□ -1.65
LSM5-209ENST00000468872 TCF7L2Q9NQB0 619 aa4.74□□□□□ -1.65
LSM5-209ENST00000468872 OLFML3Q9NRN5 406 aa4.74□□□□□ -1.65
LSM5-209ENST00000468872 ZNF701Q9NV72 531 aaPredicted RBP4.74□□□□□ -1.65
LSM5-209ENST00000468872 KCNG2Q9UJ96 466 aa4.74□□□□□ -1.65
LSM5-209ENST00000468872 RASAL2Q9UJF2 1139 aa4.74□□□□□ -1.65
LSM5-209ENST00000468872 DIP2BQ9P265 1576 aa4.74□□□□□ -1.65
LSM5-209ENST00000468872 IGLV5-45A0A087WSX0 123 aa4.73□□□□□ -1.65
LSM5-209ENST00000468872 A0A1W2PPK0 400 aa4.73□□□□□ -1.65
LSM5-209ENST00000468872 A0A1W2PRB8 838 aa4.73□□□□□ -1.65
LSM5-209ENST00000468872 HTR3EA5X5Y0 456 aa4.73□□□□□ -1.65
LSM5-209ENST00000468872 PI4K2BG5E9Z4 385 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms