RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 MED8Q96G25 268 aa18.47■□□□□ 0.55
SMC4-209ENST00000468653 BTBD10Q9BSF8 475 aa18.47■□□□□ 0.55
SMC4-209ENST00000468653 ZDHHC5Q9C0B5 715 aa18.47■□□□□ 0.55
SMC4-209ENST00000468653 RIC8BQ9NVN3 520 aa18.47■□□□□ 0.55
SMC4-209ENST00000468653 TRPS1Q9UHF7 1281 aa18.47■□□□□ 0.55
SMC4-209ENST00000468653 PSMD13Q9UNM6 376 aa18.47■□□□□ 0.55
SMC4-209ENST00000468653 CYP8B1Q9UNU6 501 aa18.47■□□□□ 0.55
SMC4-209ENST00000468653 ASF1AQ9Y294 204 aa18.47■□□□□ 0.55
SMC4-209ENST00000468653 RNF11Q9Y3C5 154 aa18.47■□□□□ 0.55
SMC4-209ENST00000468653 ZFC3H1O60293 1989 aaKnown RBP18.47■□□□□ 0.55
SMC4-209ENST00000468653 LOC100653049A0A140TA62 436 aa18.46■□□□□ 0.55
SMC4-209ENST00000468653 IFRD1O00458 451 aaPredicted RBP18.46■□□□□ 0.55
SMC4-209ENST00000468653 KRT34O76011 436 aa18.46■□□□□ 0.55
SMC4-209ENST00000468653 SLC16A8O95907 504 aa18.46■□□□□ 0.55
SMC4-209ENST00000468653 IGLV3-19P01714 112 aa18.46■□□□□ 0.55
SMC4-209ENST00000468653 HOXC4P09017 264 aaPredicted RBP18.46■□□□□ 0.55
SMC4-209ENST00000468653 EZRP15311 586 aaKnown RBP18.46■□□□□ 0.55
SMC4-209ENST00000468653 LBPP18428 481 aa18.46■□□□□ 0.55
SMC4-209ENST00000468653 AKT2P31751 481 aa18.46■□□□□ 0.55
SMC4-209ENST00000468653 MXRA7P84157 204 aa18.46■□□□□ 0.55
SMC4-209ENST00000468653 HOMEZQ8IX15 550 aa18.46■□□□□ 0.55
SMC4-209ENST00000468653 SIX5Q8N196 739 aa18.46■□□□□ 0.55
SMC4-209ENST00000468653 OR9A1PQ8NGU1 263 aa18.46■□□□□ 0.55
SMC4-209ENST00000468653 RAB3IPQ96QF0 476 aaPredicted RBP18.46■□□□□ 0.55
SMC4-209ENST00000468653 HHIPQ96QV1 700 aa18.46■□□□□ 0.55
SMC4-209ENST00000468653 UHRF1Q96T88 793 aaPredicted RBP18.46■□□□□ 0.55
SMC4-209ENST00000468653 NELL2Q99435 816 aa18.46■□□□□ 0.55
SMC4-209ENST00000468653 TIMM29Q9BSF4 260 aa18.46■□□□□ 0.55
SMC4-209ENST00000468653 FOXQ1Q9C009 403 aa18.46■□□□□ 0.55
SMC4-209ENST00000468653 OSGEPL1Q9H4B0 414 aa18.46■□□□□ 0.55
SMC4-209ENST00000468653 C2orf42Q9NWW7 574 aa18.46■□□□□ 0.55
SMC4-209ENST00000468653 SUFUQ9UMX1 484 aa18.46■□□□□ 0.55
SMC4-209ENST00000468653 CA5BQ9Y2D0 317 aa18.46■□□□□ 0.55
SMC4-209ENST00000468653 GPSM3Q9Y4H4 160 aa18.46■□□□□ 0.55
SMC4-209ENST00000468653 ST14Q9Y5Y6 855 aa18.46■□□□□ 0.55
SMC4-209ENST00000468653 FFAR3O14843 346 aa18.45■□□□□ 0.54
SMC4-209ENST00000468653 GPR42O15529 346 aa18.45■□□□□ 0.54
SMC4-209ENST00000468653 SLC35G4P0C7Q5 338 aa18.45■□□□□ 0.54
SMC4-209ENST00000468653 COX4I1P13073 169 aa18.45■□□□□ 0.54
SMC4-209ENST00000468653 EPORP19235 508 aa18.45■□□□□ 0.54
SMC4-209ENST00000468653 IMPA1P29218 277 aa18.45■□□□□ 0.54
SMC4-209ENST00000468653 KIAA1024LP59773 190 aa18.45■□□□□ 0.54
SMC4-209ENST00000468653 FZD5Q13467 585 aa18.45■□□□□ 0.54
SMC4-209ENST00000468653 GAS6Q14393 721 aa18.45■□□□□ 0.54
SMC4-209ENST00000468653 SQLEQ14534 574 aa18.45■□□□□ 0.54
SMC4-209ENST00000468653 PYCR3Q53H96 274 aa18.45■□□□□ 0.54
SMC4-209ENST00000468653 XKR7Q5GH72 579 aa18.45■□□□□ 0.54
SMC4-209ENST00000468653 THOC6Q86W42 341 aaKnown RBP18.45■□□□□ 0.54
SMC4-209ENST00000468653 TFGQ92734 400 aaPredicted RBP18.45■□□□□ 0.54
SMC4-209ENST00000468653 TOE1Q96GM8 510 aaKnown RBP18.45■□□□□ 0.54
SMC4-209ENST00000468653 TBC1D10AQ9BXI6 508 aa18.45■□□□□ 0.54
SMC4-209ENST00000468653 MRPL40Q9NQ50 206 aaKnown RBP18.45■□□□□ 0.54
SMC4-209ENST00000468653 KLQ9UEF7 1012 aa18.45■□□□□ 0.54
SMC4-209ENST00000468653 GIMAP2Q9UG22 337 aa18.45■□□□□ 0.54
SMC4-209ENST00000468653 ACSL5Q9ULC5 683 aa18.45■□□□□ 0.54
SMC4-209ENST00000468653 PEX11AO75192 247 aa18.45■□□□□ 0.54
SMC4-209ENST00000468653 THRAP10827 490 aa18.45■□□□□ 0.54
SMC4-209ENST00000468653 KELP23276 732 aa18.45■□□□□ 0.54
SMC4-209ENST00000468653 OXTRP30559 389 aa18.45■□□□□ 0.54
SMC4-209ENST00000468653 GNPDA1P46926 289 aa18.45■□□□□ 0.54
SMC4-209ENST00000468653 HTR6P50406 440 aa18.45■□□□□ 0.54
SMC4-209ENST00000468653 STX1BP61266 288 aa18.45■□□□□ 0.54
SMC4-209ENST00000468653 DMPKQ09013 629 aa18.45■□□□□ 0.54
SMC4-209ENST00000468653 GRB7Q14451 532 aa18.45■□□□□ 0.54
SMC4-209ENST00000468653 SYTL1Q8IYJ3 562 aa18.45■□□□□ 0.54
SMC4-209ENST00000468653 PHC3Q8NDX5 983 aa18.45■□□□□ 0.54
SMC4-209ENST00000468653 OR56A3Q8NH54 315 aa18.45■□□□□ 0.54
SMC4-209ENST00000468653 SLC29A3Q9BZD2 475 aa18.45■□□□□ 0.54
SMC4-209ENST00000468653 TAS2R1Q9NYW7 299 aa18.45■□□□□ 0.54
SMC4-209ENST00000468653 PRSS38A1L453 326 aa18.44■□□□□ 0.54
SMC4-209ENST00000468653 H0Y8X5 98 aa18.44■□□□□ 0.54
SMC4-209ENST00000468653 STK25O00506 426 aa18.44■□□□□ 0.54
SMC4-209ENST00000468653 LATO43561 262 aa18.44■□□□□ 0.54
SMC4-209ENST00000468653 KCNJ13O60928 360 aa18.44■□□□□ 0.54
SMC4-209ENST00000468653 RPN2P04844 631 aa18.44■□□□□ 0.54
SMC4-209ENST00000468653 RPL10P27635 214 aaKnown RBP18.44■□□□□ 0.54
SMC4-209ENST00000468653 HTR1BP28222 390 aa18.44■□□□□ 0.54
SMC4-209ENST00000468653 HALP42357 657 aa18.44■□□□□ 0.54
SMC4-209ENST00000468653 CLCNKAP51800 687 aa18.44■□□□□ 0.54
SMC4-209ENST00000468653 NFATC4Q14934 902 aa18.44■□□□□ 0.54
SMC4-209ENST00000468653 KIAA0895LQ68EN5 471 aa18.44■□□□□ 0.54
SMC4-209ENST00000468653 ENPP7Q6UWV6 458 aa18.44■□□□□ 0.54
SMC4-209ENST00000468653 KLHDC8AQ8IYD2 350 aa18.44■□□□□ 0.54
SMC4-209ENST00000468653 PPFIBP2Q8ND30 876 aa18.44■□□□□ 0.54
SMC4-209ENST00000468653 MAFAQ8NHW3 353 aaPredicted RBP18.44■□□□□ 0.54
SMC4-209ENST00000468653 ZNF480Q8WV37 535 aa18.44■□□□□ 0.54
SMC4-209ENST00000468653 BMFQ96LC9 184 aa18.44■□□□□ 0.54
SMC4-209ENST00000468653 C6orf106Q9H6K1 298 aaPredicted RBP18.44■□□□□ 0.54
SMC4-209ENST00000468653 FGF22Q9HCT0 170 aa18.44■□□□□ 0.54
SMC4-209ENST00000468653 INTS7Q9NVH2 962 aaKnown RBP18.44■□□□□ 0.54
SMC4-209ENST00000468653 KCNK6Q9Y257 313 aa18.44■□□□□ 0.54
SMC4-209ENST00000468653 ULK1O75385 1050 aa18.43■□□□□ 0.54
SMC4-209ENST00000468653 KRT16P08779 473 aa18.43■□□□□ 0.54
SMC4-209ENST00000468653 MAGEA9P43362 315 aa18.43■□□□□ 0.54
SMC4-209ENST00000468653 ATP4BP51164 291 aa18.43■□□□□ 0.54
SMC4-209ENST00000468653 CCR5P51681 352 aa18.43■□□□□ 0.54
SMC4-209ENST00000468653 CYLC2Q14093 348 aaPredicted RBP18.43■□□□□ 0.54
SMC4-209ENST00000468653 ABRAXAS2Q15018 415 aa18.43■□□□□ 0.54
SMC4-209ENST00000468653 CPSF6Q16630 551 aaKnown RBP eCLIP18.43■□□□□ 0.54
SMC4-209ENST00000468653 KIF19Q2TAC6 998 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms