RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 TBC1D3HP0C7X1 549 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 PRSS56P0CW18 603 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 ADRB3P13945 408 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 UGT1A6P19224 532 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 SAT1P21673 171 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 LPOP22079 712 aaPredicted RBP4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 UGT1A1P22309 533 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 UGT1A4P22310 534 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 NFKBIAP25963 317 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 MAT2AP31153 395 aaKnown RBP4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 STX2P32856 288 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 UGT1A3P35503 534 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 UGT1A5P35504 534 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 BUD31P41223 144 aaPredicted RBP4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 P2RY2P41231 377 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 MSH2P43246 934 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 MAGEA3P43357 314 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 ABCG1P45844 678 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 NEK3P51956 506 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 DGKEP52429 567 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 COPAP53621 1224 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 STARD6P59095 220 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 RPL26P61254 145 aaKnown RBP4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 PRAMEP78395 509 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 CTBP1Q13363 440 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 MSLNQ13421 630 aaPredicted RBP4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 LAMB3Q13751 1172 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 ELAVL3Q14576 367 aaKnown RBP4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 CRYMQ14894 314 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 FASTKD1Q53R41 847 aaKnown RBP4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 CEP85LQ5SZL2 805 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 LRRC66Q68CR7 880 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 TBC1D3GQ6DHY5 549 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 TBC1D3CQ6IPX1 549 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 ANO7Q6IWH7 933 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 TCTN3Q6NUS6 607 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 BRAT1Q6PJG6 821 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 FAM151BQ6UXP7 276 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 ERN2Q76MJ5 926 aaKnown RBP4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 NLRP9Q7RTR0 991 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 HSD11B1LQ7Z5J1 315 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 KCNMB4Q86W47 210 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 KLHDC8BQ8IXV7 354 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 TBC1D3Q8IZP1 549 aaPredicted RBP4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 MIER2Q8N344 545 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 TTC30BQ8N4P2 665 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 AADATQ8N5Z0 425 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 LILRA3Q8N6C8 439 aaPredicted RBP4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 TSTD1Q8NFU3 115 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 OR4L1Q8NH43 312 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 CXorf40AQ8TE69 158 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 STYXQ8WUJ0 223 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 NRG4Q8WWG1 115 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 RLN3Q8WXF3 142 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 CDKL2Q92772 493 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 VOPP1Q96AW1 172 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 ECHDC3Q96DC8 303 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 LRRC39Q96DD0 335 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 HSPBAP1Q96EW2 488 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 SCRN2Q96FV2 425 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 ATXN7L3BQ96GX2 97 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 CDKN2AIPNLQ96HQ2 116 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 LRIG1Q96JA1 1093 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 OR14A2Q96R54 314 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 RANBP9Q96S59 729 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 UHRF1Q96T88 793 aaPredicted RBP4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 NELL2Q99435 816 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 AGAP2Q99490 1192 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 GABRG3Q99928 467 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 NAT9Q9BTE0 207 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 BDH2Q9BUT1 245 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 KIFC1Q9BW19 673 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 FUT8Q9BYC5 575 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 TXLNGYQ9BZA5 131 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 TPSD1Q9BZJ3 242 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 ENKD1Q9H0I2 346 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 CDH19Q9H159 772 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 RSPH9Q9H1X1 276 aaPredicted RBP4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 ABCG8Q9H221 673 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 UGT1A7Q9HAW7 530 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 UGT1A10Q9HAW8 530 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 UGT1A8Q9HAW9 530 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 BCO1Q9HAY6 547 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 ARNT2Q9HBZ2 717 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 MAGEE1Q9HCI5 957 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 SMYD2Q9NRG4 433 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 NLE1Q9NVX2 485 aaPredicted RBP4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 ZNF446Q9NWS9 450 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 C2orf42Q9NWW7 574 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 PKD2L2Q9NZM6 624 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 HACD3Q9P035 362 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 KLHL42Q9P2K6 505 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 SLC17A6Q9P2U8 582 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 NCDNQ9UBB6 729 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 TRPS1Q9UHF7 1281 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 CNOT11Q9UKZ1 510 aaKnown RBP4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 MMP17Q9ULZ9 603 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 RPL26L1Q9UNX3 145 aaKnown RBP4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 ZFR2Q9UPR6 939 aaKnown RBP4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 PKP3Q9Y446 797 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms