RNA–Protein interactions for RNA: ENST00000468385.1

PTPN7-207, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-207ENST00000468385 FBXL4Q9UKA2 621 aa12.59□□□□□ -0.39
PTPN7-207ENST00000468385 OSGIN2Q9Y236 505 aa12.59□□□□□ -0.39
PTPN7-207ENST00000468385 ASF1AQ9Y294 204 aa12.59□□□□□ -0.39
PTPN7-207ENST00000468385 PRSS21Q9Y6M0 314 aa12.59□□□□□ -0.39
PTPN7-207ENST00000468385 ABCA12Q86UK0 2595 aa12.58□□□□□ -0.4
PTPN7-207ENST00000468385 SOCS6O14544 535 aa12.58□□□□□ -0.4
PTPN7-207ENST00000468385 LIN7AO14910 233 aaPredicted RBP12.58□□□□□ -0.4
PTPN7-207ENST00000468385 MFAP3LO75121 409 aa12.58□□□□□ -0.4
PTPN7-207ENST00000468385 AP2A2O94973 939 aa12.58□□□□□ -0.4
PTPN7-207ENST00000468385 TPM3P06753 285 aa12.58□□□□□ -0.4
PTPN7-207ENST00000468385 EDN3P14138 238 aa12.58□□□□□ -0.4
PTPN7-207ENST00000468385 POU3F2P20265 443 aaPredicted RBP12.58□□□□□ -0.4
PTPN7-207ENST00000468385 MMP11P24347 488 aa12.58□□□□□ -0.4
PTPN7-207ENST00000468385 TSFMP43897 325 aaKnown RBP12.58□□□□□ -0.4
PTPN7-207ENST00000468385 HADHBP55084 474 aaKnown RBP12.58□□□□□ -0.4
PTPN7-207ENST00000468385 OTUD4Q01804 1114 aaKnown RBP12.58□□□□□ -0.4
PTPN7-207ENST00000468385 SPARCL1Q14515 664 aa12.58□□□□□ -0.4
PTPN7-207ENST00000468385 PRPSAP1Q14558 356 aa12.58□□□□□ -0.4
PTPN7-207ENST00000468385 DBN1Q16643 649 aa12.58□□□□□ -0.4
PTPN7-207ENST00000468385 SLC5A12Q1EHB4 618 aa12.58□□□□□ -0.4
PTPN7-207ENST00000468385 NUP210LQ5VU65 1888 aa12.58□□□□□ -0.4
PTPN7-207ENST00000468385 PRAMEF13Q5VWM6 474 aa12.58□□□□□ -0.4
PTPN7-207ENST00000468385 FAM20CQ8IXL6 584 aa12.58□□□□□ -0.4
PTPN7-207ENST00000468385 KLHDC8BQ8IXV7 354 aa12.58□□□□□ -0.4
PTPN7-207ENST00000468385 PIANPQ8IYJ0 282 aa12.58□□□□□ -0.4
PTPN7-207ENST00000468385 TBC1D21Q8IYX1 336 aa12.58□□□□□ -0.4
PTPN7-207ENST00000468385 DNAJB14Q8TBM8 379 aa12.58□□□□□ -0.4
PTPN7-207ENST00000468385 CCDC110Q8TBZ0 833 aa12.58□□□□□ -0.4
PTPN7-207ENST00000468385 ACTL9Q8TC94 416 aa12.58□□□□□ -0.4
PTPN7-207ENST00000468385 GRHL3Q8TE85 626 aa12.58□□□□□ -0.4
PTPN7-207ENST00000468385 KRT35Q92764 455 aa12.58□□□□□ -0.4
PTPN7-207ENST00000468385 MARVELD3Q96A59 401 aa12.58□□□□□ -0.4
PTPN7-207ENST00000468385 NACC2Q96BF6 587 aa12.58□□□□□ -0.4
PTPN7-207ENST00000468385 NDC1Q9BTX1 674 aa12.58□□□□□ -0.4
PTPN7-207ENST00000468385 IRAK4Q9NWZ3 460 aa12.58□□□□□ -0.4
PTPN7-207ENST00000468385 POLG2Q9UHN1 485 aa12.58□□□□□ -0.4
PTPN7-207ENST00000468385 PLAGL1Q9UM63 463 aa12.58□□□□□ -0.4
PTPN7-207ENST00000468385 PLCL2Q9UPR0 1127 aa12.58□□□□□ -0.4
PTPN7-207ENST00000468385 ENTPD4Q9Y227 616 aa12.58□□□□□ -0.4
PTPN7-207ENST00000468385 TDRKHQ9Y2W6 561 aaKnown RBP12.58□□□□□ -0.4
PTPN7-207ENST00000468385 MDC1Q14676 2089 aaKnown RBP12.57□□□□□ -0.4
PTPN7-207ENST00000468385 ANKRD12Q6UB98 2062 aa12.57□□□□□ -0.4
PTPN7-207ENST00000468385 AKAP9Q99996 3911 aa12.57□□□□□ -0.4
PTPN7-207ENST00000468385 SLC5A10A0PJK1 596 aa12.57□□□□□ -0.4
PTPN7-207ENST00000468385 ARHGAP10A1A4S6 786 aa12.57□□□□□ -0.4
PTPN7-207ENST00000468385 ISM1B1AKI9 464 aa12.57□□□□□ -0.4
PTPN7-207ENST00000468385 HNRNPRO43390 633 aaKnown RBP12.57□□□□□ -0.4
PTPN7-207ENST00000468385 ONECUT2O95948 504 aa12.57□□□□□ -0.4
PTPN7-207ENST00000468385 ALAS2P22557 587 aa12.57□□□□□ -0.4
PTPN7-207ENST00000468385 ELAVL4P26378 380 aaKnown RBP12.57□□□□□ -0.4
PTPN7-207ENST00000468385 PER3P56645 1201 aa12.57□□□□□ -0.4
PTPN7-207ENST00000468385 BRD3Q15059 726 aa12.57□□□□□ -0.4
PTPN7-207ENST00000468385 NKG7Q16617 165 aa12.57□□□□□ -0.4
PTPN7-207ENST00000468385 NAPRTQ6XQN6 538 aa12.57□□□□□ -0.4
PTPN7-207ENST00000468385 COX15Q7KZN9 410 aa12.57□□□□□ -0.4
PTPN7-207ENST00000468385 TAS2R42Q7RTR8 314 aa12.57□□□□□ -0.4
PTPN7-207ENST00000468385 CDKL3Q8IVW4 592 aaPredicted RBP12.57□□□□□ -0.4
PTPN7-207ENST00000468385 OR5K2Q8NHB8 316 aa12.57□□□□□ -0.4
PTPN7-207ENST00000468385 FAR1Q8WVX9 515 aa12.57□□□□□ -0.4
PTPN7-207ENST00000468385 ELMO1Q92556 727 aa12.57□□□□□ -0.4
PTPN7-207ENST00000468385 FKBP10Q96AY3 582 aa12.57□□□□□ -0.4
PTPN7-207ENST00000468385 CDKN2AIPNLQ96HQ2 116 aa12.57□□□□□ -0.4
PTPN7-207ENST00000468385 SPATA13Q96N96 652 aa12.57□□□□□ -0.4
PTPN7-207ENST00000468385 SPSB2Q99619 263 aa12.57□□□□□ -0.4
PTPN7-207ENST00000468385 NLE1Q9NVX2 485 aaPredicted RBP12.57□□□□□ -0.4
PTPN7-207ENST00000468385 EURLQ9NYK6 297 aa12.57□□□□□ -0.4
PTPN7-207ENST00000468385 FEZ2Q9UHY8 353 aaPredicted RBP12.57□□□□□ -0.4
PTPN7-207ENST00000468385 CDC23Q9UJX2 597 aa12.57□□□□□ -0.4
PTPN7-207ENST00000468385 HS3ST3B1Q9Y662 390 aa12.57□□□□□ -0.4
PTPN7-207ENST00000468385 TEP1Q99973 2627 aaKnown RBP12.56□□□□□ -0.4
PTPN7-207ENST00000468385 A0A1B0GX78 115 aa12.56□□□□□ -0.4
PTPN7-207ENST00000468385 CCDC78A2IDD5 438 aa12.56□□□□□ -0.4
PTPN7-207ENST00000468385 BHMG1C9JSJ3 638 aaPredicted RBP12.56□□□□□ -0.4
PTPN7-207ENST00000468385 KCNN4O15554 427 aa12.56□□□□□ -0.4
PTPN7-207ENST00000468385 ZG16O60844 167 aa12.56□□□□□ -0.4
PTPN7-207ENST00000468385 AP2A1O95782 977 aa12.56□□□□□ -0.4
PTPN7-207ENST00000468385 ALBP02768 609 aa12.56□□□□□ -0.4
PTPN7-207ENST00000468385 RBP3P10745 1247 aa12.56□□□□□ -0.4
PTPN7-207ENST00000468385 MAGP20916 626 aa12.56□□□□□ -0.4
PTPN7-207ENST00000468385 NSG1P42857 185 aa12.56□□□□□ -0.4
PTPN7-207ENST00000468385 CACNG1Q06432 222 aa12.56□□□□□ -0.4
PTPN7-207ENST00000468385 CDC16Q13042 620 aa12.56□□□□□ -0.4
PTPN7-207ENST00000468385 ZNF169Q14929 603 aaPredicted RBP12.56□□□□□ -0.4
PTPN7-207ENST00000468385 KIR2DS3Q14952 304 aa12.56□□□□□ -0.4
PTPN7-207ENST00000468385 AGAP7PQ5VUJ5 663 aa12.56□□□□□ -0.4
PTPN7-207ENST00000468385 B3GNTL1Q67FW5 361 aaPredicted RBP12.56□□□□□ -0.4
PTPN7-207ENST00000468385 SP5Q6BEB4 398 aaPredicted RBP12.56□□□□□ -0.4
PTPN7-207ENST00000468385 KIRREL2Q6UWL6 708 aa12.56□□□□□ -0.4
PTPN7-207ENST00000468385 TTLL10Q6ZVT0 673 aa12.56□□□□□ -0.4
PTPN7-207ENST00000468385 OVCH1Q7RTY7 1134 aa12.56□□□□□ -0.4
PTPN7-207ENST00000468385 VSTM4Q8IW00 320 aa12.56□□□□□ -0.4
PTPN7-207ENST00000468385 COG1Q8WTW3 980 aa12.56□□□□□ -0.4
PTPN7-207ENST00000468385 DLG3Q92796 817 aa12.56□□□□□ -0.4
PTPN7-207ENST00000468385 AGAP4Q96P64 663 aa12.56□□□□□ -0.4
PTPN7-207ENST00000468385 FAM118BQ9BPY3 351 aa12.56□□□□□ -0.4
PTPN7-207ENST00000468385 SLX1AQ9BQ83 275 aa12.56□□□□□ -0.4
PTPN7-207ENST00000468385 FERMT1Q9BQL6 677 aa12.56□□□□□ -0.4
PTPN7-207ENST00000468385 UNKQ9C0B0 810 aaKnown RBP12.56□□□□□ -0.4
PTPN7-207ENST00000468385 SLC26A1Q9H2B4 701 aa12.56□□□□□ -0.4
PTPN7-207ENST00000468385 WDR54Q9H977 334 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms