RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 CMKLR1Q99788 373 aa10.71□□□□□ -0.69
MSH5-212ENST00000467319 RAB11FIP5Q9BXF6 653 aa10.71□□□□□ -0.69
MSH5-212ENST00000467319 XKR8Q9H6D3 395 aa10.71□□□□□ -0.69
MSH5-212ENST00000467319 POPDC3Q9HBV1 291 aa10.71□□□□□ -0.69
MSH5-212ENST00000467319 HRASLS2Q9NWW9 162 aa10.71□□□□□ -0.69
MSH5-212ENST00000467319 SPATA7Q9P0W8 599 aa10.71□□□□□ -0.69
MSH5-212ENST00000467319 TSR3Q9UJK0 312 aaKnown RBP10.71□□□□□ -0.69
MSH5-212ENST00000467319 PLAGL1Q9UM63 463 aa10.71□□□□□ -0.69
MSH5-212ENST00000467319 VWA7Q9Y334 891 aa10.71□□□□□ -0.69
MSH5-212ENST00000467319 LAMA5O15230 3695 aa10.71□□□□□ -0.7
MSH5-212ENST00000467319 ITPR1Q14643 2758 aa10.7□□□□□ -0.7
MSH5-212ENST00000467319 B4E171 279 aa10.7□□□□□ -0.7
MSH5-212ENST00000467319 KDM1AO60341 852 aa10.7□□□□□ -0.7
MSH5-212ENST00000467319 ACSL3O95573 720 aa10.7□□□□□ -0.7
MSH5-212ENST00000467319 CATP04040 527 aaKnown RBP10.7□□□□□ -0.7
MSH5-212ENST00000467319 CHRM5P08912 532 aaPredicted RBP10.7□□□□□ -0.7
MSH5-212ENST00000467319 FAM153BP0C7A2 387 aa10.7□□□□□ -0.7
MSH5-212ENST00000467319 CCL4P13236 92 aa10.7□□□□□ -0.7
MSH5-212ENST00000467319 HGFP14210 728 aa10.7□□□□□ -0.7
MSH5-212ENST00000467319 POLR2CP19387 275 aaPredicted RBP10.7□□□□□ -0.7
MSH5-212ENST00000467319 ITIH1P19827 911 aa10.7□□□□□ -0.7
MSH5-212ENST00000467319 PHBP35232 272 aa10.7□□□□□ -0.7
MSH5-212ENST00000467319 ETV5P41161 510 aa10.7□□□□□ -0.7
MSH5-212ENST00000467319 TSPAN7P41732 249 aa10.7□□□□□ -0.7
MSH5-212ENST00000467319 RGS4P49798 205 aa10.7□□□□□ -0.7
MSH5-212ENST00000467319 CSRP3P50461 194 aa10.7□□□□□ -0.7
MSH5-212ENST00000467319 ZNF460Q14592 562 aa10.7□□□□□ -0.7
MSH5-212ENST00000467319 SLMAPQ14BN4 828 aa10.7□□□□□ -0.7
MSH5-212ENST00000467319 CYP2A13Q16696 494 aa10.7□□□□□ -0.7
MSH5-212ENST00000467319 TBC1D25Q3MII6 688 aa10.7□□□□□ -0.7
MSH5-212ENST00000467319 FAM153CQ494X1 144 aa10.7□□□□□ -0.7
MSH5-212ENST00000467319 TMEM207Q6UWW9 146 aa10.7□□□□□ -0.7
MSH5-212ENST00000467319 FAM92BQ6ZTR7 304 aa10.7□□□□□ -0.7
MSH5-212ENST00000467319 KMT5CQ86Y97 462 aa10.7□□□□□ -0.7
MSH5-212ENST00000467319 CEP97Q8IW35 865 aa10.7□□□□□ -0.7
MSH5-212ENST00000467319 CTAGE3PQ8IX95 158 aa10.7□□□□□ -0.7
MSH5-212ENST00000467319 PPM1NQ8N819 430 aa10.7□□□□□ -0.7
MSH5-212ENST00000467319 KDF1Q8NAX2 398 aaPredicted RBP10.7□□□□□ -0.7
MSH5-212ENST00000467319 OR2L8Q8NGY9 312 aa10.7□□□□□ -0.7
MSH5-212ENST00000467319 CFAP61Q8NHU2 1237 aa10.7□□□□□ -0.7
MSH5-212ENST00000467319 SNIP1Q8TAD8 396 aaKnown RBP10.7□□□□□ -0.7
MSH5-212ENST00000467319 MDM1Q8TC05 714 aa10.7□□□□□ -0.7
MSH5-212ENST00000467319 EEF1AKMT1Q8WVE0 214 aa10.7□□□□□ -0.7
MSH5-212ENST00000467319 DLG3Q92796 817 aa10.7□□□□□ -0.7
MSH5-212ENST00000467319 RAD51AP1Q96B01 352 aa10.7□□□□□ -0.7
MSH5-212ENST00000467319 LINGO1Q96FE5 620 aa10.7□□□□□ -0.7
MSH5-212ENST00000467319 PDLIM5Q96HC4 596 aaKnown RBP10.7□□□□□ -0.7
MSH5-212ENST00000467319 ELMO2Q96JJ3 720 aa10.7□□□□□ -0.7
MSH5-212ENST00000467319 PPM1MQ96MI6 270 aa10.7□□□□□ -0.7
MSH5-212ENST00000467319 FOPNLQ96NB1 174 aa10.7□□□□□ -0.7
MSH5-212ENST00000467319 SLC46A1Q96NT5 459 aa10.7□□□□□ -0.7
MSH5-212ENST00000467319 CYTH2Q99418 400 aa10.7□□□□□ -0.7
MSH5-212ENST00000467319 B3GNT4Q9C0J1 378 aa10.7□□□□□ -0.7
MSH5-212ENST00000467319 EPB41L4BQ9H329 900 aa10.7□□□□□ -0.7
MSH5-212ENST00000467319 SPHK1Q9NYA1 384 aa10.7□□□□□ -0.7
MSH5-212ENST00000467319 ACTR10Q9NZ32 417 aa10.7□□□□□ -0.7
MSH5-212ENST00000467319 KLHL3Q9UH77 587 aa10.7□□□□□ -0.7
MSH5-212ENST00000467319 ACSL6Q9UKU0 697 aa10.7□□□□□ -0.7
MSH5-212ENST00000467319 BTRCQ9Y297 605 aa10.7□□□□□ -0.7
MSH5-212ENST00000467319 TDRKHQ9Y2W6 561 aaKnown RBP10.7□□□□□ -0.7
MSH5-212ENST00000467319 PCDHGA7Q9Y5G6 932 aa10.7□□□□□ -0.7
MSH5-212ENST00000467319 AHCTF1Q8WYP5 2266 aa10.69□□□□□ -0.7
MSH5-212ENST00000467319 KMT2BQ9UMN6 2715 aaPredicted RBP10.69□□□□□ -0.7
MSH5-212ENST00000467319 IGHV5-51A0A0C4DH38 117 aa10.69□□□□□ -0.7
MSH5-212ENST00000467319 PIPSLA2A3N6 862 aa10.69□□□□□ -0.7
MSH5-212ENST00000467319 HMX2A2RU54 273 aa10.69□□□□□ -0.7
MSH5-212ENST00000467319 C2orf74A8MZ97 194 aa10.69□□□□□ -0.7
MSH5-212ENST00000467319 PRICKLE3O43900 615 aaPredicted RBP10.69□□□□□ -0.7
MSH5-212ENST00000467319 FAM155BO75949 473 aa10.69□□□□□ -0.7
MSH5-212ENST00000467319 SLU7O95391 586 aaKnown RBP10.69□□□□□ -0.7
MSH5-212ENST00000467319 C8GP07360 202 aa10.69□□□□□ -0.7
MSH5-212ENST00000467319 MSL3P1P0C860 447 aa10.69□□□□□ -0.7
MSH5-212ENST00000467319 FGF3P11487 239 aaPredicted RBP10.69□□□□□ -0.7
MSH5-212ENST00000467319 UGT2B7P16662 529 aa10.69□□□□□ -0.7
MSH5-212ENST00000467319 NELFEP18615 380 aaKnown RBP10.69□□□□□ -0.7
MSH5-212ENST00000467319 PRDX3P30048 256 aaKnown RBP10.69□□□□□ -0.7
MSH5-212ENST00000467319 CSTF2P33240 577 aaKnown RBP eCLIP10.69□□□□□ -0.7
MSH5-212ENST00000467319 ERVPABLB-1P60509 514 aa10.69□□□□□ -0.7
MSH5-212ENST00000467319 IL2P60568 153 aa10.69□□□□□ -0.7
MSH5-212ENST00000467319 POU4F1Q01851 419 aa10.69□□□□□ -0.7
MSH5-212ENST00000467319 PDAP1Q13442 181 aaKnown RBP10.69□□□□□ -0.7
MSH5-212ENST00000467319 KIR2DS3Q14952 304 aa10.69□□□□□ -0.7
MSH5-212ENST00000467319 PPP1R3AQ16821 1122 aa10.69□□□□□ -0.7
MSH5-212ENST00000467319 SNAP47Q5SQN1 464 aa10.69□□□□□ -0.7
MSH5-212ENST00000467319 GRTP1Q5TC63 336 aa10.69□□□□□ -0.7
MSH5-212ENST00000467319 SPESP1Q6UW49 350 aa10.69□□□□□ -0.7
MSH5-212ENST00000467319 TRMT10CQ7L0Y3 403 aaKnown RBP10.69□□□□□ -0.7
MSH5-212ENST00000467319 LSMEM2Q8N112 164 aa10.69□□□□□ -0.7
MSH5-212ENST00000467319 FBXO39Q8N4B4 442 aa10.69□□□□□ -0.7
MSH5-212ENST00000467319 OR9A1PQ8NGU1 263 aa10.69□□□□□ -0.7
MSH5-212ENST00000467319 MAGEC3Q8TD91 643 aa10.69□□□□□ -0.7
MSH5-212ENST00000467319 ZCCHC14Q8WYQ9 949 aaKnown RBP10.69□□□□□ -0.7
MSH5-212ENST00000467319 PMEPA1Q969W9 287 aa10.69□□□□□ -0.7
MSH5-212ENST00000467319 IL17FQ96PD4 163 aa10.69□□□□□ -0.7
MSH5-212ENST00000467319 OR2A14Q96R47 310 aa10.69□□□□□ -0.7
MSH5-212ENST00000467319 MAP3K3Q99759 626 aa10.69□□□□□ -0.7
MSH5-212ENST00000467319 DDA1Q9BW61 102 aa10.69□□□□□ -0.7
MSH5-212ENST00000467319 CCDC86Q9H6F5 360 aaKnown RBP10.69□□□□□ -0.7
MSH5-212ENST00000467319 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.69□□□□□ -0.7
MSH5-212ENST00000467319 TXNDC16Q9P2K2 825 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms