RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 OR14I1A6ND48 311 aa8.55□□□□□ -1.04
HPS4-209ENST00000466781 TBX1O43435 398 aa8.55□□□□□ -1.04
HPS4-209ENST00000466781 ENTPD5O75356 428 aa8.55□□□□□ -1.04
HPS4-209ENST00000466781 NADKO95544 446 aaPredicted RBP8.55□□□□□ -1.04
HPS4-209ENST00000466781 BPNT1O95861 308 aa8.55□□□□□ -1.04
HPS4-209ENST00000466781 PGRP06401 933 aa8.55□□□□□ -1.04
HPS4-209ENST00000466781 PTX3P26022 381 aaPredicted RBP8.55□□□□□ -1.04
HPS4-209ENST00000466781 MPIP34949 423 aa8.55□□□□□ -1.04
HPS4-209ENST00000466781 NSG1P42857 185 aa8.55□□□□□ -1.04
HPS4-209ENST00000466781 CASP6P55212 293 aa8.55□□□□□ -1.04
HPS4-209ENST00000466781 ADAM8P78325 824 aa8.55□□□□□ -1.04
HPS4-209ENST00000466781 MPP1Q00013 466 aa8.55□□□□□ -1.04
HPS4-209ENST00000466781 PRKD1Q15139 912 aaPredicted RBP8.55□□□□□ -1.04
HPS4-209ENST00000466781 C2orf27AQ580R0 203 aa8.55□□□□□ -1.04
HPS4-209ENST00000466781 TMEM156Q8N614 296 aa8.55□□□□□ -1.04
HPS4-209ENST00000466781 TSEN2Q8NCE0 465 aaKnown RBP8.55□□□□□ -1.04
HPS4-209ENST00000466781 NXPE2Q96DL1 559 aa8.55□□□□□ -1.04
HPS4-209ENST00000466781 RPL10LQ96L21 214 aaKnown RBP8.55□□□□□ -1.04
HPS4-209ENST00000466781 CCDC28BQ9BUN5 200 aa8.55□□□□□ -1.04
HPS4-209ENST00000466781 TRMT61BQ9BVS5 477 aaKnown RBP8.55□□□□□ -1.04
HPS4-209ENST00000466781 STRADBQ9C0K7 418 aa8.55□□□□□ -1.04
HPS4-209ENST00000466781 DNAAF2Q9NVR5 837 aaKnown RBP8.55□□□□□ -1.04
HPS4-209ENST00000466781 PCDHGC4Q9Y5F7 938 aa8.55□□□□□ -1.04
HPS4-209ENST00000466781 AP4B1Q9Y6B7 739 aa8.55□□□□□ -1.04
HPS4-209ENST00000466781 UBR2Q8IWV8 1755 aa8.55□□□□□ -1.04
HPS4-209ENST00000466781 PI15O43692 258 aa8.55□□□□□ -1.04
HPS4-209ENST00000466781 CPNE3O75131 537 aaKnown RBP8.55□□□□□ -1.04
HPS4-209ENST00000466781 KRT36O76013 467 aa8.55□□□□□ -1.04
HPS4-209ENST00000466781 AP2A1O95782 977 aa8.55□□□□□ -1.04
HPS4-209ENST00000466781 PSMA1P25786 263 aaKnown RBP8.55□□□□□ -1.04
HPS4-209ENST00000466781 MAP3K8P41279 467 aa8.55□□□□□ -1.04
HPS4-209ENST00000466781 CDH12P55289 794 aa8.55□□□□□ -1.04
HPS4-209ENST00000466781 E2F2Q14209 437 aa8.55□□□□□ -1.04
HPS4-209ENST00000466781 PDGFRLQ15198 375 aa8.55□□□□□ -1.04
HPS4-209ENST00000466781 TTMPQ5BVD1 217 aa8.55□□□□□ -1.04
HPS4-209ENST00000466781 AAGABQ6PD74 315 aa8.55□□□□□ -1.04
HPS4-209ENST00000466781 DNM1P34Q6PK57 102 aa8.55□□□□□ -1.04
HPS4-209ENST00000466781 RBM44Q6ZP01 1051 aaKnown RBP8.55□□□□□ -1.04
HPS4-209ENST00000466781 ZNF627Q7L945 461 aa8.55□□□□□ -1.04
HPS4-209ENST00000466781 AKAP14Q86UN6 197 aa8.55□□□□□ -1.04
HPS4-209ENST00000466781 CEP97Q8IW35 865 aa8.55□□□□□ -1.04
HPS4-209ENST00000466781 C4orf32Q8N8J7 132 aa8.55□□□□□ -1.04
HPS4-209ENST00000466781 FAM110BQ8TC76 370 aa8.55□□□□□ -1.04
HPS4-209ENST00000466781 LMX1AQ8TE12 382 aa8.55□□□□□ -1.04
HPS4-209ENST00000466781 UFD1Q92890 307 aa8.55□□□□□ -1.04
HPS4-209ENST00000466781 GTPBP3Q969Y2 492 aaKnown RBP8.55□□□□□ -1.04
HPS4-209ENST00000466781 PCDHGB1Q9Y5G3 927 aa8.55□□□□□ -1.04
HPS4-209ENST00000466781 SPIN1Q9Y657 262 aaPredicted RBP8.55□□□□□ -1.04
HPS4-209ENST00000466781 RBM47A0AV96 593 aaKnown RBP8.55□□□□□ -1.04
HPS4-209ENST00000466781 NPIPA5E9PKD4 350 aa8.55□□□□□ -1.04
HPS4-209ENST00000466781 SCDO00767 359 aa8.55□□□□□ -1.04
HPS4-209ENST00000466781 TNFRSF10BO14763 440 aa8.55□□□□□ -1.04
HPS4-209ENST00000466781 REM1O75628 298 aa8.55□□□□□ -1.04
HPS4-209ENST00000466781 PRPS2P11908 318 aa8.55□□□□□ -1.04
HPS4-209ENST00000466781 OR3A3P47888 321 aa8.55□□□□□ -1.04
HPS4-209ENST00000466781 OR3A2P47893 321 aa8.55□□□□□ -1.04
HPS4-209ENST00000466781 GHRHRQ02643 423 aa8.55□□□□□ -1.04
HPS4-209ENST00000466781 PTPN20Q4JDL3 420 aa8.55□□□□□ -1.04
HPS4-209ENST00000466781 TPGS2Q68CL5 300 aa8.55□□□□□ -1.04
HPS4-209ENST00000466781 LDB1Q86U70 411 aaPredicted RBP8.55□□□□□ -1.04
HPS4-209ENST00000466781 SH3RF2Q8TEC5 729 aa8.55□□□□□ -1.04
HPS4-209ENST00000466781 GIPC3Q8TF64 312 aa8.55□□□□□ -1.04
HPS4-209ENST00000466781 PCED1BQ96HM7 432 aa8.55□□□□□ -1.04
HPS4-209ENST00000466781 DIRAS2Q96HU8 199 aa8.55□□□□□ -1.04
HPS4-209ENST00000466781 DHX33Q9H6R0 707 aaKnown RBP8.55□□□□□ -1.04
HPS4-209ENST00000466781 CACNG4Q9UBN1 327 aa8.55□□□□□ -1.04
HPS4-209ENST00000466781 NPIPA1Q9UND3 350 aa8.55□□□□□ -1.04
HPS4-209ENST00000466781 FAM240BA0A1B0GVZ2 78 aa8.55□□□□□ -1.04
HPS4-209ENST00000466781 ILVBLA1L0T0 632 aa8.55□□□□□ -1.04
HPS4-209ENST00000466781 COQ9O75208 318 aa8.55□□□□□ -1.04
HPS4-209ENST00000466781 RLN2P04090 185 aa8.55□□□□□ -1.04
HPS4-209ENST00000466781 PBX3P40426 434 aa8.55□□□□□ -1.04
HPS4-209ENST00000466781 ARSIQ5FYB1 569 aa8.55□□□□□ -1.04
HPS4-209ENST00000466781 TAC4Q86UU9 113 aa8.55□□□□□ -1.04
HPS4-209ENST00000466781 Q8N9G6 341 aaPredicted RBP8.55□□□□□ -1.04
HPS4-209ENST00000466781 GRHL3Q8TE85 626 aa8.55□□□□□ -1.04
HPS4-209ENST00000466781 C7orf43Q8WVR3 580 aa8.55□□□□□ -1.04
HPS4-209ENST00000466781 BADQ92934 168 aa8.55□□□□□ -1.04
HPS4-209ENST00000466781 GMLQ99445 158 aa8.55□□□□□ -1.04
HPS4-209ENST00000466781 AGAP2Q99490 1192 aa8.55□□□□□ -1.04
HPS4-209ENST00000466781 CFL2Q9Y281 166 aa8.55□□□□□ -1.04
HPS4-209ENST00000466781 SNX3O60493 162 aa8.54□□□□□ -1.04
HPS4-209ENST00000466781 GADD45GO95257 159 aa8.54□□□□□ -1.04
HPS4-209ENST00000466781 RB1P06400 928 aa8.54□□□□□ -1.04
HPS4-209ENST00000466781 ZNF3P17036 446 aa8.54□□□□□ -1.04
HPS4-209ENST00000466781 NRIP1P48552 1158 aa8.54□□□□□ -1.04
HPS4-209ENST00000466781 MARCKSL1P49006 195 aa8.54□□□□□ -1.04
HPS4-209ENST00000466781 PER3P56645 1201 aa8.54□□□□□ -1.04
HPS4-209ENST00000466781 ENPP2Q13822 863 aa8.54□□□□□ -1.04
HPS4-209ENST00000466781 IFI44LQ53G44 452 aa8.54□□□□□ -1.04
HPS4-209ENST00000466781 WDR45BQ5MNZ6 344 aa8.54□□□□□ -1.04
HPS4-209ENST00000466781 METTL21CQ5VZV1 264 aa8.54□□□□□ -1.04
HPS4-209ENST00000466781 CYP2U1Q7Z449 544 aa8.54□□□□□ -1.04
HPS4-209ENST00000466781 ARL10Q8N8L6 244 aa8.54□□□□□ -1.04
HPS4-209ENST00000466781 PXYLP1Q8TE99 480 aa8.54□□□□□ -1.04
HPS4-209ENST00000466781 TBATAQ96M53 351 aa8.54□□□□□ -1.04
HPS4-209ENST00000466781 AIFM2Q9BRQ8 373 aa8.54□□□□□ -1.04
HPS4-209ENST00000466781 IL23AQ9NPF7 189 aa8.54□□□□□ -1.04
HPS4-209ENST00000466781 CCDC59Q9P031 241 aaKnown RBP8.54□□□□□ -1.04
HPS4-209ENST00000466781 FKBPLQ9UIM3 349 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms