RNA–Protein interactions for RNA: ENST00000466391.1

LSG1-206, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 2

Gene LSG1, Length 791 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-206ENST00000466391 HECTD3Q5T447 861 aa8.16□□□□□ -1.1
LSG1-206ENST00000466391 MBNL2Q5VZF2 373 aaKnown RBP8.16□□□□□ -1.1
LSG1-206ENST00000466391 TCTN3Q6NUS6 607 aa8.16□□□□□ -1.1
LSG1-206ENST00000466391 AFTPHQ6ULP2 937 aa8.16□□□□□ -1.1
LSG1-206ENST00000466391 TMEM126BQ8IUX1 230 aa8.16□□□□□ -1.1
LSG1-206ENST00000466391 LGI2Q8N0V4 545 aa8.16□□□□□ -1.1
LSG1-206ENST00000466391 PGAM4Q8N0Y7 254 aa8.16□□□□□ -1.1
LSG1-206ENST00000466391 FBXW8Q8N3Y1 598 aa8.16□□□□□ -1.1
LSG1-206ENST00000466391 CEP70Q8NHQ1 597 aa8.16□□□□□ -1.1
LSG1-206ENST00000466391 NRG4Q8WWG1 115 aa8.16□□□□□ -1.1
LSG1-206ENST00000466391 HDAC10Q969S8 669 aa8.16□□□□□ -1.1
LSG1-206ENST00000466391 FAM136AQ96C01 138 aa8.16□□□□□ -1.1
LSG1-206ENST00000466391 LENG8Q96PV6 779 aaPredicted RBP8.16□□□□□ -1.1
LSG1-206ENST00000466391 CYP2S1Q96SQ9 504 aa8.16□□□□□ -1.1
LSG1-206ENST00000466391 MYCBPQ99417 103 aaPredicted RBP8.16□□□□□ -1.1
LSG1-206ENST00000466391 SERPINI1Q99574 410 aa8.16□□□□□ -1.1
LSG1-206ENST00000466391 ANAPC1Q9H1A4 1944 aa8.16□□□□□ -1.1
LSG1-206ENST00000466391 TFB2MQ9H5Q4 396 aaKnown RBP8.16□□□□□ -1.1
LSG1-206ENST00000466391 ZBTB26Q9HCK0 441 aa8.16□□□□□ -1.1
LSG1-206ENST00000466391 PLXNA4Q9HCM2 1894 aa8.16□□□□□ -1.1
LSG1-206ENST00000466391 S100A14Q9HCY8 104 aa8.16□□□□□ -1.1
LSG1-206ENST00000466391 TLR9Q9NR96 1032 aa8.16□□□□□ -1.1
LSG1-206ENST00000466391 NLE1Q9NVX2 485 aaPredicted RBP8.16□□□□□ -1.1
LSG1-206ENST00000466391 ZDHHC7Q9NXF8 308 aa8.16□□□□□ -1.1
LSG1-206ENST00000466391 UTP6Q9NYH9 597 aaKnown RBP8.16□□□□□ -1.1
LSG1-206ENST00000466391 UBA2Q9UBT2 640 aaPredicted RBP8.16□□□□□ -1.1
LSG1-206ENST00000466391 STK39Q9UEW8 545 aa8.16□□□□□ -1.1
LSG1-206ENST00000466391 BCAP29Q9UHQ4 241 aa8.16□□□□□ -1.1
LSG1-206ENST00000466391 TMCO1Q9UM00 188 aa8.16□□□□□ -1.1
LSG1-206ENST00000466391 TBC1D30Q9Y2I9 924 aa8.16□□□□□ -1.1
LSG1-206ENST00000466391 PCDHGA9Q9Y5G4 932 aaKnown RBP8.16□□□□□ -1.1
LSG1-206ENST00000466391 PCDHGA8Q9Y5G5 932 aa8.16□□□□□ -1.1
LSG1-206ENST00000466391 PCDHGA7Q9Y5G6 932 aa8.16□□□□□ -1.1
LSG1-206ENST00000466391 PCDHGA6Q9Y5G7 932 aa8.16□□□□□ -1.1
LSG1-206ENST00000466391 PCDHGA3Q9Y5H0 932 aa8.16□□□□□ -1.1
LSG1-206ENST00000466391 PCDHGA2Q9Y5H1 932 aa8.16□□□□□ -1.1
LSG1-206ENST00000466391 CXorf51AA0A1B0GTR3 108 aa8.15□□□□□ -1.1
LSG1-206ENST00000466391 TBKBP1A7MCY6 615 aa8.15□□□□□ -1.1
LSG1-206ENST00000466391 MEI4A8MW99 385 aa8.15□□□□□ -1.1
LSG1-206ENST00000466391 H7C0S8 307 aa8.15□□□□□ -1.1
LSG1-206ENST00000466391 INSIG1O15503 277 aa8.15□□□□□ -1.1
LSG1-206ENST00000466391 FOXD2O60548 495 aaPredicted RBP8.15□□□□□ -1.1
LSG1-206ENST00000466391 SOAT2O75908 522 aa8.15□□□□□ -1.1
LSG1-206ENST00000466391 STC2O76061 302 aa8.15□□□□□ -1.1
LSG1-206ENST00000466391 GOT2P00505 430 aaKnown RBP8.15□□□□□ -1.1
LSG1-206ENST00000466391 FGF4P08620 206 aa8.15□□□□□ -1.1
LSG1-206ENST00000466391 CCDC166P0CW27 439 aa8.15□□□□□ -1.1
LSG1-206ENST00000466391 HSPA8P11142 646 aaKnown RBP8.15□□□□□ -1.1
LSG1-206ENST00000466391 CD1DP15813 335 aa8.15□□□□□ -1.1
LSG1-206ENST00000466391 ZNF37AP17032 561 aaPredicted RBP8.15□□□□□ -1.1
LSG1-206ENST00000466391 CTSSP25774 331 aa8.15□□□□□ -1.1
LSG1-206ENST00000466391 SLC6A4P31645 630 aa8.15□□□□□ -1.1
LSG1-206ENST00000466391 MRPL19P49406 292 aaKnown RBP8.15□□□□□ -1.1
LSG1-206ENST00000466391 GATMP50440 423 aa8.15□□□□□ -1.1
LSG1-206ENST00000466391 STC1P52823 247 aa8.15□□□□□ -1.1
LSG1-206ENST00000466391 ADARP55265 1226 aaKnown RBP8.15□□□□□ -1.1
LSG1-206ENST00000466391 MEF2AQ02078 507 aaPredicted RBP8.15□□□□□ -1.1
LSG1-206ENST00000466391 TBL3Q12788 808 aaKnown RBP8.15□□□□□ -1.1
LSG1-206ENST00000466391 CDC16Q13042 620 aa8.15□□□□□ -1.1
LSG1-206ENST00000466391 CUL3Q13618 768 aa8.15□□□□□ -1.1
LSG1-206ENST00000466391 CYLC2Q14093 348 aaPredicted RBP8.15□□□□□ -1.1
LSG1-206ENST00000466391 SQLEQ14534 574 aa8.15□□□□□ -1.1
LSG1-206ENST00000466391 TCTN1Q2MV58 587 aa8.15□□□□□ -1.1
LSG1-206ENST00000466391 DEFB115Q30KQ5 88 aa8.15□□□□□ -1.1
LSG1-206ENST00000466391 ZNF789Q5FWF6 425 aa8.15□□□□□ -1.1
LSG1-206ENST00000466391 LILRA6Q6PI73 481 aa8.15□□□□□ -1.1
LSG1-206ENST00000466391 HACD2Q6Y1H2 254 aa8.15□□□□□ -1.1
LSG1-206ENST00000466391 ANKRD33Q7Z3H0 272 aa8.15□□□□□ -1.1
LSG1-206ENST00000466391 ADGRE4PQ86SQ3 457 aa8.15□□□□□ -1.1
LSG1-206ENST00000466391 SDCCAG8Q86SQ7 713 aaPredicted RBP8.15□□□□□ -1.1
LSG1-206ENST00000466391 ISCA2Q86U28 154 aa8.15□□□□□ -1.1
LSG1-206ENST00000466391 DEFB107AQ8IZN7 70 aa8.15□□□□□ -1.1
LSG1-206ENST00000466391 MYEOVQ96EZ4 313 aa8.15□□□□□ -1.1
LSG1-206ENST00000466391 PAWRQ96IZ0 340 aaKnown RBP8.15□□□□□ -1.1
LSG1-206ENST00000466391 TBATAQ96M53 351 aa8.15□□□□□ -1.1
LSG1-206ENST00000466391 PRICKLE1Q96MT3 831 aaPredicted RBP8.15□□□□□ -1.1
LSG1-206ENST00000466391 ZNF184Q99676 751 aaPredicted RBP8.15□□□□□ -1.1
LSG1-206ENST00000466391 HERC2P3Q9BVR0 1158 aa8.15□□□□□ -1.1
LSG1-206ENST00000466391 C1QTNF3Q9BXJ4 246 aa8.15□□□□□ -1.1
LSG1-206ENST00000466391 NUF2Q9BZD4 464 aa8.15□□□□□ -1.1
LSG1-206ENST00000466391 VCX3BQ9H321 246 aa8.15□□□□□ -1.1
LSG1-206ENST00000466391 GSTO2Q9H4Y5 243 aa8.15□□□□□ -1.1
LSG1-206ENST00000466391 IL23AQ9NPF7 189 aa8.15□□□□□ -1.1
LSG1-206ENST00000466391 MRPL40Q9NQ50 206 aaKnown RBP8.15□□□□□ -1.1
LSG1-206ENST00000466391 GEMIN8Q9NWZ8 242 aaKnown RBP8.15□□□□□ -1.1
LSG1-206ENST00000466391 MARCH4Q9P2E8 410 aaPredicted RBP8.15□□□□□ -1.1
LSG1-206ENST00000466391 SARDHQ9UL12 918 aa8.15□□□□□ -1.1
LSG1-206ENST00000466391 ZFR2Q9UPR6 939 aaKnown RBP8.15□□□□□ -1.1
LSG1-206ENST00000466391 POMPQ9Y244 141 aa8.15□□□□□ -1.1
LSG1-206ENST00000466391 SPEF1Q9Y4P9 236 aa8.15□□□□□ -1.1
LSG1-206ENST00000466391 SCN5AQ14524 2016 aa8.14□□□□□ -1.11
LSG1-206ENST00000466391 UBE2QL1A1L167 161 aa8.14□□□□□ -1.11
LSG1-206ENST00000466391 CCDC162PA2VCL2 907 aa8.14□□□□□ -1.11
LSG1-206ENST00000466391 PMS2P1A4D2B8 440 aa8.14□□□□□ -1.11
LSG1-206ENST00000466391 VGLL3A8MV65 326 aa8.14□□□□□ -1.11
LSG1-206ENST00000466391 CD3EAPO15446 510 aaKnown RBP8.14□□□□□ -1.11
LSG1-206ENST00000466391 COCHO43405 550 aa8.14□□□□□ -1.11
LSG1-206ENST00000466391 FOXS1O43638 330 aa8.14□□□□□ -1.11
LSG1-206ENST00000466391 BUD23O43709 281 aaKnown RBP8.14□□□□□ -1.11
LSG1-206ENST00000466391 PEX1O43933 1283 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms