RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 TLR6Q9Y2C9 796 aa19.32■□□□□ 0.68
SDF4-205ENST00000465727 CCL27Q9Y4X3 112 aa19.32■□□□□ 0.68
SDF4-205ENST00000465727 PEX16Q9Y5Y5 336 aa19.32■□□□□ 0.68
SDF4-205ENST00000465727 SCO2O43819 266 aa19.31■□□□□ 0.68
SDF4-205ENST00000465727 LCKP06239 509 aa19.31■□□□□ 0.68
SDF4-205ENST00000465727 THP07101 528 aa19.31■□□□□ 0.68
SDF4-205ENST00000465727 CYP4B1P13584 511 aa19.31■□□□□ 0.68
SDF4-205ENST00000465727 SPNP16150 400 aa19.31■□□□□ 0.68
SDF4-205ENST00000465727 FPR1P21462 350 aa19.31■□□□□ 0.68
SDF4-205ENST00000465727 DNAJA1P31689 397 aaKnown RBP19.31■□□□□ 0.68
SDF4-205ENST00000465727 CTSKP43235 329 aa19.31■□□□□ 0.68
SDF4-205ENST00000465727 GZMMP51124 257 aa19.31■□□□□ 0.68
SDF4-205ENST00000465727 GALNT3Q14435 633 aa19.31■□□□□ 0.68
SDF4-205ENST00000465727 ABRAXAS2Q15018 415 aa19.31■□□□□ 0.68
SDF4-205ENST00000465727 TBCEQ15813 527 aaPredicted RBP19.31■□□□□ 0.68
SDF4-205ENST00000465727 CACHD1Q5VU97 1274 aa19.31■□□□□ 0.68
SDF4-205ENST00000465727 GOLGA7Q7Z5G4 137 aa19.31■□□□□ 0.68
SDF4-205ENST00000465727 ZNF467Q7Z7K2 595 aaPredicted RBP19.31■□□□□ 0.68
SDF4-205ENST00000465727 POLR2AP24928 1970 aaKnown RBP19.31■□□□□ 0.68
SDF4-205ENST00000465727 PER2O15055 1255 aa19.31■□□□□ 0.68
SDF4-205ENST00000465727 PSMA3P25788 255 aa19.31■□□□□ 0.68
SDF4-205ENST00000465727 TGFBR1P36897 503 aa19.31■□□□□ 0.68
SDF4-205ENST00000465727 ETV6P41212 452 aa19.31■□□□□ 0.68
SDF4-205ENST00000465727 CRYBB1P53674 252 aaPredicted RBP19.31■□□□□ 0.68
SDF4-205ENST00000465727 ELP6Q0PNE2 266 aa19.31■□□□□ 0.68
SDF4-205ENST00000465727 PTGR1Q14914 329 aa19.31■□□□□ 0.68
SDF4-205ENST00000465727 AAK1Q2M2I8 961 aa19.31■□□□□ 0.68
SDF4-205ENST00000465727 METTL23Q86XA0 190 aa19.31■□□□□ 0.68
SDF4-205ENST00000465727 C3orf58Q8NDZ4 430 aa19.31■□□□□ 0.68
SDF4-205ENST00000465727 FAM83FQ8NEG4 500 aaPredicted RBP19.31■□□□□ 0.68
SDF4-205ENST00000465727 IL17RDQ8NFM7 739 aa19.31■□□□□ 0.68
SDF4-205ENST00000465727 CD200R1Q8TD46 325 aa19.31■□□□□ 0.68
SDF4-205ENST00000465727 NUDT8Q8WV74 236 aa19.31■□□□□ 0.68
SDF4-205ENST00000465727 PYCR2Q96C36 320 aa19.31■□□□□ 0.68
SDF4-205ENST00000465727 CPPED1Q9BRF8 314 aaPredicted RBP19.31■□□□□ 0.68
SDF4-205ENST00000465727 IL1RAPQ9NPH3 570 aa19.31■□□□□ 0.68
SDF4-205ENST00000465727 COMMD10Q9Y6G5 202 aa19.31■□□□□ 0.68
SDF4-205ENST00000465727 IGLV3-10A0A075B6K4 115 aa19.3■□□□□ 0.68
SDF4-205ENST00000465727 EVPLLA8MZ36 301 aa19.3■□□□□ 0.68
SDF4-205ENST00000465727 SLC28A1O00337 649 aa19.3■□□□□ 0.68
SDF4-205ENST00000465727 OR7A17O14581 309 aa19.3■□□□□ 0.68
SDF4-205ENST00000465727 MUSKO15146 869 aa19.3■□□□□ 0.68
SDF4-205ENST00000465727 CA12O43570 354 aa19.3■□□□□ 0.68
SDF4-205ENST00000465727 CCNDBP1O95273 360 aa19.3■□□□□ 0.68
SDF4-205ENST00000465727 PRSS56P0CW18 603 aa19.3■□□□□ 0.68
SDF4-205ENST00000465727 SMPD1P17405 629 aa19.3■□□□□ 0.68
SDF4-205ENST00000465727 RPL9P32969 192 aaKnown RBP19.3■□□□□ 0.68
SDF4-205ENST00000465727 LIPAP38571 399 aa19.3■□□□□ 0.68
SDF4-205ENST00000465727 DMPKQ09013 629 aa19.3■□□□□ 0.68
SDF4-205ENST00000465727 GTF2H2Q13888 395 aa19.3■□□□□ 0.68
SDF4-205ENST00000465727 SMN1Q16637 294 aaKnown RBP19.3■□□□□ 0.68
SDF4-205ENST00000465727 PARP15Q460N3 678 aa19.3■□□□□ 0.68
SDF4-205ENST00000465727 SPANXN4Q5MJ08 99 aa19.3■□□□□ 0.68
SDF4-205ENST00000465727 LRIF1Q5T3J3 769 aa19.3■□□□□ 0.68
SDF4-205ENST00000465727 GTF2H2CQ6P1K8 395 aa19.3■□□□□ 0.68
SDF4-205ENST00000465727 AHSA2Q719I0 299 aa19.3■□□□□ 0.68
SDF4-205ENST00000465727 SCD5Q86SK9 330 aa19.3■□□□□ 0.68
SDF4-205ENST00000465727 SIDT2Q8NBJ9 832 aaKnown RBP19.3■□□□□ 0.68
SDF4-205ENST00000465727 EEF1AKMT1Q8WVE0 214 aa19.3■□□□□ 0.68
SDF4-205ENST00000465727 KCNJ9Q92806 393 aa19.3■□□□□ 0.68
SDF4-205ENST00000465727 PKMYT1Q99640 499 aa19.3■□□□□ 0.68
SDF4-205ENST00000465727 RHNO1Q9BSD3 238 aa19.3■□□□□ 0.68
SDF4-205ENST00000465727 ELP3Q9H9T3 547 aa19.3■□□□□ 0.68
SDF4-205ENST00000465727 WNT9AO14904 365 aa19.29■□□□□ 0.68
SDF4-205ENST00000465727 NDUFB5O43674 189 aa19.29■□□□□ 0.68
SDF4-205ENST00000465727 RPLP0P05388 317 aaKnown RBP19.29■□□□□ 0.68
SDF4-205ENST00000465727 TTPAP49638 278 aa19.29■□□□□ 0.68
SDF4-205ENST00000465727 CLCN4P51793 760 aa19.29■□□□□ 0.68
SDF4-205ENST00000465727 IL1RL1Q01638 556 aa19.29■□□□□ 0.68
SDF4-205ENST00000465727 ABHD18Q0P651 414 aa19.29■□□□□ 0.68
SDF4-205ENST00000465727 ZNF235Q14590 738 aa19.29■□□□□ 0.68
SDF4-205ENST00000465727 CARD16Q5EG05 197 aa19.29■□□□□ 0.68
SDF4-205ENST00000465727 GDPD3Q7L5L3 318 aa19.29■□□□□ 0.68
SDF4-205ENST00000465727 TMEM132CQ8N3T6 1108 aa19.29■□□□□ 0.68
SDF4-205ENST00000465727 SLC39A13Q96H72 371 aa19.29■□□□□ 0.68
SDF4-205ENST00000465727 OR52E6Q96RD3 313 aa19.29■□□□□ 0.68
SDF4-205ENST00000465727 HBEGFQ99075 208 aa19.29■□□□□ 0.68
SDF4-205ENST00000465727 MAN2B2Q9Y2E5 1009 aa19.29■□□□□ 0.68
SDF4-205ENST00000465727 MYO16Q9Y6X6 1858 aa19.29■□□□□ 0.68
SDF4-205ENST00000465727 PGLSO95336 258 aa19.29■□□□□ 0.68
SDF4-205ENST00000465727 F2P00734 622 aa19.29■□□□□ 0.68
SDF4-205ENST00000465727 ALOX12P18054 663 aa19.29■□□□□ 0.68
SDF4-205ENST00000465727 HOXA9P31269 272 aa19.29■□□□□ 0.68
SDF4-205ENST00000465727 GGT5P36269 586 aa19.29■□□□□ 0.68
SDF4-205ENST00000465727 KRT6CP48668 564 aa19.29■□□□□ 0.68
SDF4-205ENST00000465727 SERINC3Q13530 473 aa19.29■□□□□ 0.68
SDF4-205ENST00000465727 DNAJC14Q6Y2X3 702 aaPredicted RBP19.29■□□□□ 0.68
SDF4-205ENST00000465727 CEP68Q76N32 757 aa19.29■□□□□ 0.68
SDF4-205ENST00000465727 OR6F1Q8NGZ6 308 aa19.29■□□□□ 0.68
SDF4-205ENST00000465727 CDADC1Q9BWV3 514 aa19.29■□□□□ 0.68
SDF4-205ENST00000465727 KCNH6Q9H252 994 aa19.29■□□□□ 0.68
SDF4-205ENST00000465727 KRT84Q9NSB2 600 aa19.29■□□□□ 0.68
SDF4-205ENST00000465727 KIF17Q9P2E2 1029 aa19.29■□□□□ 0.68
SDF4-205ENST00000465727 AASSQ9UDR5 926 aa19.29■□□□□ 0.68
SDF4-205ENST00000465727 PCDHGB6Q9Y5F9 930 aa19.29■□□□□ 0.68
SDF4-205ENST00000465727 A0A096LPI6 279 aa19.28■□□□□ 0.68
SDF4-205ENST00000465727 PDZK1P1A8MUH7 402 aa19.28■□□□□ 0.68
SDF4-205ENST00000465727 LOC110117498-PIK3R3F6TDL0 507 aa19.28■□□□□ 0.68
SDF4-205ENST00000465727 ZW10O43264 779 aa19.28■□□□□ 0.68
SDF4-205ENST00000465727 RAMP2O60895 175 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms