RNA–Protein interactions for RNA: ENST00000465421.5

SIK3-207, Transcript of SIK family kinase 3, humanhuman

TSL 2

Gene SIK3, Length 3,459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-207ENST00000465421 RPRD1BQ9NQG5 326 aaKnown RBP6.35□□□□□ -1.39
SIK3-207ENST00000465421 PDGFCQ9NRA1 345 aa6.35□□□□□ -1.39
SIK3-207ENST00000465421 DPP3Q9NY33 737 aa6.35□□□□□ -1.39
SIK3-207ENST00000465421 VNN3Q9NY84 501 aa6.35□□□□□ -1.39
SIK3-207ENST00000465421 RNF6Q9Y252 685 aa6.35□□□□□ -1.39
SIK3-207ENST00000465421 PCDHGB2Q9Y5G2 931 aa6.35□□□□□ -1.39
SIK3-207ENST00000465421 PEX16Q9Y5Y5 336 aa6.35□□□□□ -1.39
SIK3-207ENST00000465421 NYNRINQ9P2P1 1898 aaKnown RBP6.35□□□□□ -1.39
SIK3-207ENST00000465421 CCL15-CCL14A0A0B4J2E2 113 aa6.34□□□□□ -1.39
SIK3-207ENST00000465421 LINC00854A0A1B0GVQ3 168 aa6.34□□□□□ -1.39
SIK3-207ENST00000465421 MEIOCA2RUB1 952 aa6.34□□□□□ -1.39
SIK3-207ENST00000465421 RRN3P2A6NIE6 340 aa6.34□□□□□ -1.39
SIK3-207ENST00000465421 LOC110117498-PIK3R3F6TDL0 507 aa6.34□□□□□ -1.39
SIK3-207ENST00000465421 SEC22BO75396 215 aa6.34□□□□□ -1.39
SIK3-207ENST00000465421 WBP4O75554 376 aaKnown RBP6.34□□□□□ -1.39
SIK3-207ENST00000465421 MED26O95402 600 aa6.34□□□□□ -1.39
SIK3-207ENST00000465421 MMP3P08254 477 aa6.34□□□□□ -1.39
SIK3-207ENST00000465421 PIK3CBP42338 1070 aa6.34□□□□□ -1.39
SIK3-207ENST00000465421 RPS5P46782 204 aaKnown RBP6.34□□□□□ -1.39
SIK3-207ENST00000465421 SCAPQ12770 1279 aa6.34□□□□□ -1.39
SIK3-207ENST00000465421 SLAMF1Q13291 335 aa6.34□□□□□ -1.39
SIK3-207ENST00000465421 SP140Q13342 867 aa6.34□□□□□ -1.39
SIK3-207ENST00000465421 TMEM132DQ14C87 1099 aa6.34□□□□□ -1.39
SIK3-207ENST00000465421 MAD2L1BPQ15013 274 aaPredicted RBP6.34□□□□□ -1.39
SIK3-207ENST00000465421 CCL15Q16663 113 aa6.34□□□□□ -1.39
SIK3-207ENST00000465421 FAM110CQ1W6H9 321 aa6.34□□□□□ -1.39
SIK3-207ENST00000465421 DUSP28Q4G0W2 176 aa6.34□□□□□ -1.39
SIK3-207ENST00000465421 CST9Q5W186 159 aa6.34□□□□□ -1.39
SIK3-207ENST00000465421 CYP20A1Q6UW02 462 aa6.34□□□□□ -1.39
SIK3-207ENST00000465421 PDZD4Q76G19 769 aaPredicted RBP6.34□□□□□ -1.39
SIK3-207ENST00000465421 ZNF598Q86UK7 904 aaKnown RBP6.34□□□□□ -1.39
SIK3-207ENST00000465421 CCDC71Q8IV32 467 aaPredicted RBP6.34□□□□□ -1.39
SIK3-207ENST00000465421 AMER2Q8N7J2 671 aa6.34□□□□□ -1.39
SIK3-207ENST00000465421 PTGR2Q8N8N7 351 aaPredicted RBP6.34□□□□□ -1.39
SIK3-207ENST00000465421 ZNF540Q8NDQ6 660 aa6.34□□□□□ -1.39
SIK3-207ENST00000465421 OR8J3Q8NGG0 315 aa6.34□□□□□ -1.39
SIK3-207ENST00000465421 OR10Q1Q8NGQ4 319 aa6.34□□□□□ -1.39
SIK3-207ENST00000465421 NUDT8Q8WV74 236 aa6.34□□□□□ -1.39
SIK3-207ENST00000465421 APH1BQ8WW43 257 aa6.34□□□□□ -1.39
SIK3-207ENST00000465421 SLC7A6Q92536 515 aa6.34□□□□□ -1.39
SIK3-207ENST00000465421 PIK3R3Q92569 461 aa6.34□□□□□ -1.39
SIK3-207ENST00000465421 TSPAN17Q96FV3 270 aa6.34□□□□□ -1.39
SIK3-207ENST00000465421 ZFYVE19Q96K21 471 aa6.34□□□□□ -1.39
SIK3-207ENST00000465421 NELL2Q99435 816 aa6.34□□□□□ -1.39
SIK3-207ENST00000465421 PHOX2BQ99453 314 aa6.34□□□□□ -1.39
SIK3-207ENST00000465421 NUAK2Q9H093 628 aa6.34□□□□□ -1.39
SIK3-207ENST00000465421 ACTR8Q9H981 624 aa6.34□□□□□ -1.39
SIK3-207ENST00000465421 PRM3Q9NNZ6 103 aa6.34□□□□□ -1.39
SIK3-207ENST00000465421 GIMAP4Q9NUV9 329 aa6.34□□□□□ -1.39
SIK3-207ENST00000465421 SCN3BQ9NY72 215 aa6.34□□□□□ -1.39
SIK3-207ENST00000465421 CACNG4Q9UBN1 327 aa6.34□□□□□ -1.39
SIK3-207ENST00000465421 NDRG4Q9ULP0 352 aaKnown RBP6.34□□□□□ -1.39
SIK3-207ENST00000465421 SPEF1Q9Y4P9 236 aa6.34□□□□□ -1.39
SIK3-207ENST00000465421 U3KQV3 271 aa6.34□□□□□ -1.39
SIK3-207ENST00000465421 SMIM35A0A1B0GVV1 85 aa6.34□□□□□ -1.39
SIK3-207ENST00000465421 NCF1BA6NI72 391 aaPredicted RBP6.34□□□□□ -1.39
SIK3-207ENST00000465421 C12orf71A8MTZ7 269 aa6.34□□□□□ -1.39
SIK3-207ENST00000465421 NCF1CA8MVU1 366 aaPredicted RBP6.34□□□□□ -1.39
SIK3-207ENST00000465421 TRIM77I1YAP6 450 aa6.34□□□□□ -1.39
SIK3-207ENST00000465421 TSPAN3O60637 253 aa6.34□□□□□ -1.39
SIK3-207ENST00000465421 TMCC2O75069 709 aa6.34□□□□□ -1.39
SIK3-207ENST00000465421 CRCPO75575 148 aa6.34□□□□□ -1.39
SIK3-207ENST00000465421 DBTP11182 482 aaKnown RBP6.34□□□□□ -1.39
SIK3-207ENST00000465421 IL7P13232 177 aa6.34□□□□□ -1.39
SIK3-207ENST00000465421 NCF1P14598 390 aaPredicted RBP6.34□□□□□ -1.39
SIK3-207ENST00000465421 KCNE1P15382 129 aa6.34□□□□□ -1.39
SIK3-207ENST00000465421 RPS2P15880 293 aaKnown RBP6.34□□□□□ -1.39
SIK3-207ENST00000465421 HOXA9P31269 272 aa6.34□□□□□ -1.39
SIK3-207ENST00000465421 HOXA11P31270 313 aaPredicted RBP6.34□□□□□ -1.39
SIK3-207ENST00000465421 CTSKP43235 329 aa6.34□□□□□ -1.39
SIK3-207ENST00000465421 CHRNA4P43681 627 aa6.34□□□□□ -1.39
SIK3-207ENST00000465421 SLC15A1P46059 708 aa6.34□□□□□ -1.39
SIK3-207ENST00000465421 NKX3-2P78367 333 aa6.34□□□□□ -1.39
SIK3-207ENST00000465421 ITKQ08881 620 aa6.34□□□□□ -1.39
SIK3-207ENST00000465421 ADIGQ0VDE8 80 aa6.34□□□□□ -1.39
SIK3-207ENST00000465421 KDM4DQ6B0I6 523 aa6.34□□□□□ -1.39
SIK3-207ENST00000465421 SHQ1Q6PI26 577 aaKnown RBP6.34□□□□□ -1.39
SIK3-207ENST00000465421 SLC46A3Q7Z3Q1 461 aa6.34□□□□□ -1.39
SIK3-207ENST00000465421 ADHFE1Q8IWW8 467 aa6.34□□□□□ -1.39
SIK3-207ENST00000465421 EID3Q8N140 333 aa6.34□□□□□ -1.39
SIK3-207ENST00000465421 FBXL6Q8N531 539 aa6.34□□□□□ -1.39
SIK3-207ENST00000465421 GPRC5AQ8NFJ5 357 aa6.34□□□□□ -1.39
SIK3-207ENST00000465421 OR6P1Q8NGX9 317 aa6.34□□□□□ -1.39
SIK3-207ENST00000465421 FBXO30Q8TB52 745 aa6.34□□□□□ -1.39
SIK3-207ENST00000465421 ZFAND1Q8TCF1 268 aa6.34□□□□□ -1.39
SIK3-207ENST00000465421 IPCEF1Q8WWN9 437 aaPredicted RBP6.34□□□□□ -1.39
SIK3-207ENST00000465421 EDEM1Q92611 657 aa6.34□□□□□ -1.39
SIK3-207ENST00000465421 NELL1Q92832 810 aa6.34□□□□□ -1.39
SIK3-207ENST00000465421 ESAMQ96AP7 390 aa6.34□□□□□ -1.39
SIK3-207ENST00000465421 FYTTD1Q96QD9 318 aaKnown RBP6.34□□□□□ -1.39
SIK3-207ENST00000465421 TMEM209Q96SK2 561 aa6.34□□□□□ -1.39
SIK3-207ENST00000465421 BARD1Q99728 777 aaKnown RBP6.34□□□□□ -1.39
SIK3-207ENST00000465421 COQ7Q99807 217 aa6.34□□□□□ -1.39
SIK3-207ENST00000465421 FDXACB1Q9BRP7 624 aaPredicted RBP6.34□□□□□ -1.39
SIK3-207ENST00000465421 ACTL8Q9H568 366 aa6.34□□□□□ -1.39
SIK3-207ENST00000465421 MAGIXQ9H6Y5 334 aa6.34□□□□□ -1.39
SIK3-207ENST00000465421 RNF167Q9H6Y7 350 aa6.34□□□□□ -1.39
SIK3-207ENST00000465421 RANGRFQ9HD47 186 aaPredicted RBP6.34□□□□□ -1.39
SIK3-207ENST00000465421 WDR6Q9NNW5 1121 aaKnown RBP6.34□□□□□ -1.39
SIK3-207ENST00000465421 C14orf119Q9NWQ9 140 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms