RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 SPSB1Q96BD6 273 aa1.76□□□□□ -2.13
NUCKS1-202ENST00000464938 SFXN2Q96NB2 322 aa1.76□□□□□ -2.13
NUCKS1-202ENST00000464938 PGLYRP2Q96PD5 576 aa1.76□□□□□ -2.13
NUCKS1-202ENST00000464938 RAB3IPQ96QF0 476 aaPredicted RBP1.76□□□□□ -2.13
NUCKS1-202ENST00000464938 RTP3Q9BQQ7 232 aa1.76□□□□□ -2.13
NUCKS1-202ENST00000464938 FAM129AQ9BZQ8 928 aa1.76□□□□□ -2.13
NUCKS1-202ENST00000464938 LAT2Q9GZY6 243 aa1.76□□□□□ -2.13
NUCKS1-202ENST00000464938 TFB2MQ9H5Q4 396 aaKnown RBP1.76□□□□□ -2.13
NUCKS1-202ENST00000464938 DNAJC4Q9NNZ3 241 aa1.76□□□□□ -2.13
NUCKS1-202ENST00000464938 SDR39U1Q9NRG7 319 aaPredicted RBP1.76□□□□□ -2.13
NUCKS1-202ENST00000464938 OLFML3Q9NRN5 406 aa1.76□□□□□ -2.13
NUCKS1-202ENST00000464938 SLC38A7Q9NVC3 462 aa1.76□□□□□ -2.13
NUCKS1-202ENST00000464938 COQ3Q9NZJ6 369 aa1.76□□□□□ -2.13
NUCKS1-202ENST00000464938 ZKSCAN7Q9P0L1 754 aaPredicted RBP1.76□□□□□ -2.13
NUCKS1-202ENST00000464938 SLC24A2Q9UI40 661 aa1.76□□□□□ -2.13
NUCKS1-202ENST00000464938 NOTCH4Q99466 2003 aa1.76□□□□□ -2.13
NUCKS1-202ENST00000464938 DOCK7Q96N67 2140 aa1.75□□□□□ -2.13
NUCKS1-202ENST00000464938 FLT1P17948 1338 aa1.75□□□□□ -2.13
NUCKS1-202ENST00000464938 IGLV9-49A0A0B4J1Y8 123 aa1.75□□□□□ -2.13
NUCKS1-202ENST00000464938 A0A1W2PRQ8 180 aa1.75□□□□□ -2.13
NUCKS1-202ENST00000464938 OR6C76A6NM76 312 aa1.75□□□□□ -2.13
NUCKS1-202ENST00000464938 PSMD14O00487 310 aa1.75□□□□□ -2.13
NUCKS1-202ENST00000464938 ATP6V0E1O15342 81 aa1.75□□□□□ -2.13
NUCKS1-202ENST00000464938 FGF17O60258 216 aa1.75□□□□□ -2.13
NUCKS1-202ENST00000464938 PRKRAO75569 313 aaKnown RBP1.75□□□□□ -2.13
NUCKS1-202ENST00000464938 ATP6AP2O75787 350 aa1.75□□□□□ -2.13
NUCKS1-202ENST00000464938 NADKO95544 446 aaPredicted RBP1.75□□□□□ -2.13
NUCKS1-202ENST00000464938 CRYAAP02489 173 aa1.75□□□□□ -2.13
NUCKS1-202ENST00000464938 UMODP07911 640 aa1.75□□□□□ -2.13
NUCKS1-202ENST00000464938 ZFYP08048 801 aaPredicted RBP1.75□□□□□ -2.13
NUCKS1-202ENST00000464938 SMIM18P0DKX4 95 aa1.75□□□□□ -2.13
NUCKS1-202ENST00000464938 HAPLN1P10915 354 aaPredicted RBP1.75□□□□□ -2.13
NUCKS1-202ENST00000464938 HSPA8P11142 646 aaKnown RBP1.75□□□□□ -2.13
NUCKS1-202ENST00000464938 TCF4P15884 667 aa1.75□□□□□ -2.13
NUCKS1-202ENST00000464938 EPCAMP16422 314 aa1.75□□□□□ -2.13
NUCKS1-202ENST00000464938 ADRA2CP18825 462 aa1.75□□□□□ -2.13
NUCKS1-202ENST00000464938 EFNA1P20827 205 aaPredicted RBP1.75□□□□□ -2.13
NUCKS1-202ENST00000464938 EEF1B2P24534 225 aaKnown RBP1.75□□□□□ -2.13
NUCKS1-202ENST00000464938 TIA1P31483 386 aaKnown RBP eCLIP1.75□□□□□ -2.13
NUCKS1-202ENST00000464938 MATR3P43243 847 aaKnown RBP eCLIP1.75□□□□□ -2.13
NUCKS1-202ENST00000464938 NPY4RP50391 375 aa1.75□□□□□ -2.13
NUCKS1-202ENST00000464938 MAPK12P53778 367 aa1.75□□□□□ -2.13
NUCKS1-202ENST00000464938 MAZP56270 477 aaKnown RBP1.75□□□□□ -2.13
NUCKS1-202ENST00000464938 UBASH3AP57075 661 aa1.75□□□□□ -2.13
NUCKS1-202ENST00000464938 RPS18P62269 152 aaKnown RBP1.75□□□□□ -2.13
NUCKS1-202ENST00000464938 CAMK2DQ13557 499 aa1.75□□□□□ -2.13
NUCKS1-202ENST00000464938 TUBB2AQ13885 445 aa1.75□□□□□ -2.13
NUCKS1-202ENST00000464938 TNIP1Q15025 636 aa1.75□□□□□ -2.13
NUCKS1-202ENST00000464938 NPTX1Q15818 432 aa1.75□□□□□ -2.13
NUCKS1-202ENST00000464938 FAM174BQ3ZCQ3 159 aa1.75□□□□□ -2.13
NUCKS1-202ENST00000464938 PHLDA2Q53GA4 152 aa1.75□□□□□ -2.13
NUCKS1-202ENST00000464938 HECTD3Q5T447 861 aa1.75□□□□□ -2.13
NUCKS1-202ENST00000464938 SUSD4Q5VX71 490 aa1.75□□□□□ -2.13
NUCKS1-202ENST00000464938 SLC27A1Q6PCB7 646 aa1.75□□□□□ -2.13
NUCKS1-202ENST00000464938 CORO6Q6QEF8 472 aa1.75□□□□□ -2.13
NUCKS1-202ENST00000464938 GDPD4Q6W3E5 623 aa1.75□□□□□ -2.13
NUCKS1-202ENST00000464938 ZBTB49Q6ZSB9 765 aa1.75□□□□□ -2.13
NUCKS1-202ENST00000464938 MFSD6Q6ZSS7 791 aa1.75□□□□□ -2.13
NUCKS1-202ENST00000464938 NUP54Q7Z3B4 507 aa1.75□□□□□ -2.13
NUCKS1-202ENST00000464938 ANKRD33Q7Z3H0 272 aa1.75□□□□□ -2.13
NUCKS1-202ENST00000464938 ZNF554Q86TJ5 538 aa1.75□□□□□ -2.13
NUCKS1-202ENST00000464938 CUZD1Q86UP6 607 aa1.75□□□□□ -2.13
NUCKS1-202ENST00000464938 TMEM139Q8IV31 216 aa1.75□□□□□ -2.13
NUCKS1-202ENST00000464938 FAM114A1Q8IWE2 563 aa1.75□□□□□ -2.13
NUCKS1-202ENST00000464938 ZNF611Q8N823 705 aa1.75□□□□□ -2.13
NUCKS1-202ENST00000464938 THAP8Q8NA92 274 aa1.75□□□□□ -2.13
NUCKS1-202ENST00000464938 OR1J1Q8NGS3 322 aa1.75□□□□□ -2.13
NUCKS1-202ENST00000464938 C9orf43Q8TAL5 461 aaPredicted RBP1.75□□□□□ -2.13
NUCKS1-202ENST00000464938 FAM162AQ96A26 154 aa1.75□□□□□ -2.13
NUCKS1-202ENST00000464938 MOB3AQ96BX8 217 aa1.75□□□□□ -2.13
NUCKS1-202ENST00000464938 ZNF524Q96C55 264 aa1.75□□□□□ -2.13
NUCKS1-202ENST00000464938 ERO1AQ96HE7 468 aa1.75□□□□□ -2.13
NUCKS1-202ENST00000464938 SENP5Q96HI0 755 aaPredicted RBP1.75□□□□□ -2.13
NUCKS1-202ENST00000464938 ZNF583Q96ND8 569 aa1.75□□□□□ -2.13
NUCKS1-202ENST00000464938 MYADMQ96S97 322 aa1.75□□□□□ -2.13
NUCKS1-202ENST00000464938 RAD9AQ99638 391 aa1.75□□□□□ -2.13
NUCKS1-202ENST00000464938 TUBB2BQ9BVA1 445 aa1.75□□□□□ -2.13
NUCKS1-202ENST00000464938 CDH20Q9HBT6 801 aa1.75□□□□□ -2.13
NUCKS1-202ENST00000464938 ZNF334Q9HCZ1 680 aaPredicted RBP1.75□□□□□ -2.13
NUCKS1-202ENST00000464938 A4GALTQ9NPC4 353 aa1.75□□□□□ -2.13
NUCKS1-202ENST00000464938 SH3GLB2Q9NR46 395 aa1.75□□□□□ -2.13
NUCKS1-202ENST00000464938 FAM118AQ9NWS6 357 aa1.75□□□□□ -2.13
NUCKS1-202ENST00000464938 C2orf42Q9NWW7 574 aa1.75□□□□□ -2.13
NUCKS1-202ENST00000464938 CHCHD3Q9NX63 227 aaKnown RBP1.75□□□□□ -2.13
NUCKS1-202ENST00000464938 SPHK1Q9NYA1 384 aa1.75□□□□□ -2.13
NUCKS1-202ENST00000464938 TAAR2Q9P1P5 351 aa1.75□□□□□ -2.13
NUCKS1-202ENST00000464938 ZDHHC2Q9UIJ5 367 aa1.75□□□□□ -2.13
NUCKS1-202ENST00000464938 RNF150Q9ULK6 438 aa1.75□□□□□ -2.13
NUCKS1-202ENST00000464938 SLC7A7Q9UM01 511 aa1.75□□□□□ -2.13
NUCKS1-202ENST00000464938 TRAV24A0A0B4J272 114 aa1.74□□□□□ -2.13
NUCKS1-202ENST00000464938 IGHV4-61A0A0C4DH41 118 aa1.74□□□□□ -2.13
NUCKS1-202ENST00000464938 LOC101059948A0A1B0GTJ6 334 aa1.74□□□□□ -2.13
NUCKS1-202ENST00000464938 C5orf52A6NGY3 159 aa1.74□□□□□ -2.13
NUCKS1-202ENST00000464938 MSGN1A6NI15 193 aa1.74□□□□□ -2.13
NUCKS1-202ENST00000464938 IFITM10A6NMD0 228 aa1.74□□□□□ -2.13
NUCKS1-202ENST00000464938 ERVV-2B6SEH9 535 aa1.74□□□□□ -2.13
NUCKS1-202ENST00000464938 O00370 1275 aa1.74□□□□□ -2.13
NUCKS1-202ENST00000464938 PLOD2O00469 737 aa1.74□□□□□ -2.13
NUCKS1-202ENST00000464938 MEIS2O14770 477 aa1.74□□□□□ -2.13
NUCKS1-202ENST00000464938 AP5Z1O43299 807 aa1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms