RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 MAPK10P53779 464 aa14.06□□□□□ -0.16
SQSTM1-205ENST00000464493 NAB1Q13506 487 aa14.06□□□□□ -0.16
SQSTM1-205ENST00000464493 SLMAPQ14BN4 828 aa14.06□□□□□ -0.16
SQSTM1-205ENST00000464493 CCSMST1Q4G0I0 132 aa14.06□□□□□ -0.16
SQSTM1-205ENST00000464493 FAM129CQ86XR2 697 aa14.06□□□□□ -0.16
SQSTM1-205ENST00000464493 RAB42Q8N4Z0 105 aa14.06□□□□□ -0.16
SQSTM1-205ENST00000464493 PPM1NQ8N819 430 aa14.06□□□□□ -0.16
SQSTM1-205ENST00000464493 KDF1Q8NAX2 398 aaPredicted RBP14.06□□□□□ -0.16
SQSTM1-205ENST00000464493 ASB11Q8WXH4 323 aa14.06□□□□□ -0.16
SQSTM1-205ENST00000464493 KLHL6Q8WZ60 621 aa14.06□□□□□ -0.16
SQSTM1-205ENST00000464493 VPS39Q96JC1 886 aa14.06□□□□□ -0.16
SQSTM1-205ENST00000464493 ZNF578Q96N58 590 aaPredicted RBP14.06□□□□□ -0.16
SQSTM1-205ENST00000464493 CDC42EP4Q9H3Q1 356 aaKnown RBP14.06□□□□□ -0.16
SQSTM1-205ENST00000464493 ASCL3Q9NQ33 180 aa14.06□□□□□ -0.16
SQSTM1-205ENST00000464493 THSD1Q9NS62 852 aa14.06□□□□□ -0.16
SQSTM1-205ENST00000464493 ACTR10Q9NZ32 417 aa14.06□□□□□ -0.16
SQSTM1-205ENST00000464493 POMT2Q9UKY4 750 aa14.06□□□□□ -0.16
SQSTM1-205ENST00000464493 ARHGEF33A8MVX0 844 aa14.05□□□□□ -0.16
SQSTM1-205ENST00000464493 CDRT15L2A8MXV6 281 aa14.05□□□□□ -0.16
SQSTM1-205ENST00000464493 B4E171 279 aa14.05□□□□□ -0.16
SQSTM1-205ENST00000464493 GFYI3L273 518 aa14.05□□□□□ -0.16
SQSTM1-205ENST00000464493 RASGRF2O14827 1237 aa14.05□□□□□ -0.16
SQSTM1-205ENST00000464493 ZBTB14O43829 449 aa14.05□□□□□ -0.16
SQSTM1-205ENST00000464493 MAP4P27816 1152 aaKnown RBP14.05□□□□□ -0.16
SQSTM1-205ENST00000464493 PKLRP30613 574 aa14.05□□□□□ -0.16
SQSTM1-205ENST00000464493 SPRP35270 261 aaPredicted RBP14.05□□□□□ -0.16
SQSTM1-205ENST00000464493 DEKP35659 375 aaKnown RBP14.05□□□□□ -0.16
SQSTM1-205ENST00000464493 TSPAN7P41732 249 aa14.05□□□□□ -0.16
SQSTM1-205ENST00000464493 PGGT1BP53609 377 aa14.05□□□□□ -0.16
SQSTM1-205ENST00000464493 ERVPABLB-1P60509 514 aa14.05□□□□□ -0.16
SQSTM1-205ENST00000464493 IL2P60568 153 aa14.05□□□□□ -0.16
SQSTM1-205ENST00000464493 TBC1D25Q3MII6 688 aa14.05□□□□□ -0.16
SQSTM1-205ENST00000464493 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.05□□□□□ -0.16
SQSTM1-205ENST00000464493 GRTP1Q5TC63 336 aa14.05□□□□□ -0.16
SQSTM1-205ENST00000464493 TMEM164Q5U3C3 297 aa14.05□□□□□ -0.16
SQSTM1-205ENST00000464493 PIWIL4Q7Z3Z4 852 aaKnown RBP14.05□□□□□ -0.16
SQSTM1-205ENST00000464493 CARFQ8N187 725 aa14.05□□□□□ -0.16
SQSTM1-205ENST00000464493 BMPERQ8N8U9 685 aa14.05□□□□□ -0.16
SQSTM1-205ENST00000464493 OR9A1PQ8NGU1 263 aa14.05□□□□□ -0.16
SQSTM1-205ENST00000464493 OR2L8Q8NGY9 312 aa14.05□□□□□ -0.16
SQSTM1-205ENST00000464493 ZCCHC14Q8WYQ9 949 aaKnown RBP14.05□□□□□ -0.16
SQSTM1-205ENST00000464493 FGF11Q92914 225 aa14.05□□□□□ -0.16
SQSTM1-205ENST00000464493 USP7Q93009 1102 aa14.05□□□□□ -0.16
SQSTM1-205ENST00000464493 LINGO1Q96FE5 620 aa14.05□□□□□ -0.16
SQSTM1-205ENST00000464493 IL17FQ96PD4 163 aa14.05□□□□□ -0.16
SQSTM1-205ENST00000464493 TAAR9Q96RI9 348 aa14.05□□□□□ -0.16
SQSTM1-205ENST00000464493 CYTH2Q99418 400 aa14.05□□□□□ -0.16
SQSTM1-205ENST00000464493 RBBP8Q99708 897 aa14.05□□□□□ -0.16
SQSTM1-205ENST00000464493 RAB11FIP5Q9BXF6 653 aa14.05□□□□□ -0.16
SQSTM1-205ENST00000464493 C1GALT1Q9NS00 363 aa14.05□□□□□ -0.16
SQSTM1-205ENST00000464493 SLC39A1Q9NY26 324 aa14.05□□□□□ -0.16
SQSTM1-205ENST00000464493 SPHK1Q9NYA1 384 aa14.05□□□□□ -0.16
SQSTM1-205ENST00000464493 LNPEPQ9UIQ6 1025 aa14.05□□□□□ -0.16
SQSTM1-205ENST00000464493 MTO1Q9Y2Z2 717 aaKnown RBP14.05□□□□□ -0.16
SQSTM1-205ENST00000464493 DMXL2Q8TDJ6 3036 aa14.05□□□□□ -0.16
SQSTM1-205ENST00000464493 KRT87PA6NCN2 255 aa14.04□□□□□ -0.16
SQSTM1-205ENST00000464493 ISM1B1AKI9 464 aa14.04□□□□□ -0.16
SQSTM1-205ENST00000464493 NVLO15381 856 aaKnown RBP14.04□□□□□ -0.16
SQSTM1-205ENST00000464493 FAM155BO75949 473 aa14.04□□□□□ -0.16
SQSTM1-205ENST00000464493 ACSL3O95573 720 aa14.04□□□□□ -0.16
SQSTM1-205ENST00000464493 ZBTB11O95625 1053 aaPredicted RBP14.04□□□□□ -0.16
SQSTM1-205ENST00000464493 NELFEP18615 380 aaKnown RBP14.04□□□□□ -0.16
SQSTM1-205ENST00000464493 CDH3P22223 829 aa14.04□□□□□ -0.16
SQSTM1-205ENST00000464493 ARL4DP49703 201 aa14.04□□□□□ -0.16
SQSTM1-205ENST00000464493 SLC12A2P55011 1212 aa14.04□□□□□ -0.16
SQSTM1-205ENST00000464493 TAS2R39P59534 338 aa14.04□□□□□ -0.16
SQSTM1-205ENST00000464493 TUBB4BP68371 445 aa14.04□□□□□ -0.16
SQSTM1-205ENST00000464493 MC2RQ01718 297 aa14.04□□□□□ -0.16
SQSTM1-205ENST00000464493 POU4F1Q01851 419 aa14.04□□□□□ -0.16
SQSTM1-205ENST00000464493 KIR2DS3Q14952 304 aa14.04□□□□□ -0.16
SQSTM1-205ENST00000464493 EFTUD2Q15029 972 aaKnown RBP eCLIP14.04□□□□□ -0.162e-7■■■■□ 19.8
SQSTM1-205ENST00000464493 FBXO38Q6PIJ6 1188 aa14.04□□□□□ -0.16
SQSTM1-205ENST00000464493 SPESP1Q6UW49 350 aa14.04□□□□□ -0.16
SQSTM1-205ENST00000464493 UBE2R2Q712K3 238 aaPredicted RBP14.04□□□□□ -0.16
SQSTM1-205ENST00000464493 CLEC14AQ86T13 490 aa14.04□□□□□ -0.16
SQSTM1-205ENST00000464493 KMT5CQ86Y97 462 aa14.04□□□□□ -0.16
SQSTM1-205ENST00000464493 RASGRP3Q8IV61 690 aa14.04□□□□□ -0.16
SQSTM1-205ENST00000464493 MYO1HQ8N1T3 1032 aa14.04□□□□□ -0.16
SQSTM1-205ENST00000464493 C2orf73Q8N5S3 287 aaPredicted RBP14.04□□□□□ -0.16
SQSTM1-205ENST00000464493 EIF1ADQ8N9N8 165 aaKnown RBP14.04□□□□□ -0.16
SQSTM1-205ENST00000464493 LINC01555Q8NAE3 123 aa14.04□□□□□ -0.16
SQSTM1-205ENST00000464493 FBXO15Q8NCQ5 510 aaPredicted RBP14.04□□□□□ -0.16
SQSTM1-205ENST00000464493 SLC41A2Q96JW4 573 aa14.04□□□□□ -0.16
SQSTM1-205ENST00000464493 PPM1MQ96MI6 270 aa14.04□□□□□ -0.16
SQSTM1-205ENST00000464493 OR2A14Q96R47 310 aa14.04□□□□□ -0.16
SQSTM1-205ENST00000464493 FUT8Q9BYC5 575 aa14.04□□□□□ -0.16
SQSTM1-205ENST00000464493 B3GNT4Q9C0J1 378 aa14.04□□□□□ -0.16
SQSTM1-205ENST00000464493 TWSG1Q9GZX9 223 aa14.04□□□□□ -0.16
SQSTM1-205ENST00000464493 SYTL2Q9HCH5 934 aa14.04□□□□□ -0.16
SQSTM1-205ENST00000464493 FBXO8Q9NRD0 319 aa14.04□□□□□ -0.16
SQSTM1-205ENST00000464493 SPATA7Q9P0W8 599 aa14.04□□□□□ -0.16
SQSTM1-205ENST00000464493 PCDHGA7Q9Y5G6 932 aa14.04□□□□□ -0.16
SQSTM1-205ENST00000464493 CELSR3Q9NYQ7 3312 aa14.03□□□□□ -0.16
SQSTM1-205ENST00000464493 SLC9B1P1A6NJY1 282 aa14.03□□□□□ -0.16
SQSTM1-205ENST00000464493 C9orf172C9J069 976 aa14.03□□□□□ -0.16
SQSTM1-205ENST00000464493 MYO1CO00159 1063 aa14.03□□□□□ -0.16
SQSTM1-205ENST00000464493 SLU7O95391 586 aaKnown RBP14.03□□□□□ -0.16
SQSTM1-205ENST00000464493 TSPAN12O95859 305 aa14.03□□□□□ -0.16
SQSTM1-205ENST00000464493 C8GP07360 202 aa14.03□□□□□ -0.16
SQSTM1-205ENST00000464493 UGT2B7P16662 529 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms